BLASTX nr result

ID: Chrysanthemum21_contig00023761 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00023761
         (445 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI01985.1| hypothetical protein Ccrd_019762 [Cynara carduncu...    62   2e-08
ref|XP_022028223.1| transcription factor HHO6-like [Helianthus a...    58   5e-07

>gb|KVI01985.1| hypothetical protein Ccrd_019762 [Cynara cardunculus var. scolymus]
          Length = 398

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
 Frame = -2

Query: 435 GASWVQSHGHYLEKQS---NSQPGSPAGPLLNCXXXXXXXXXG--DSMADCEDERFENNC 271
           G  W+ +   Y+ + S   N+Q GSP GPLLNC            DSM D EDE+ ENNC
Sbjct: 326 GGLWIPAQDQYVVESSKHINTQSGSPDGPLLNCTTATGGTSTTGGDSMDDGEDEKSENNC 385

Query: 270 WKSHDYTSGKE 238
           WK H +TS K+
Sbjct: 386 WKGHVHTSAKD 396


>ref|XP_022028223.1| transcription factor HHO6-like [Helianthus annuus]
 gb|OTG31136.1| putative myb domain, plant, Homeodomain-like protein [Helianthus
           annuus]
          Length = 370

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 31/57 (54%), Positives = 35/57 (61%)
 Frame = -2

Query: 444 VTSGASWVQSHGHYLEKQSNSQPGSPAGPLLNCXXXXXXXXXGDSMADCEDERFENN 274
           V S   W Q HG+Y+EK  NSQ GSP GPLLNC         GDSM D EDE+ +NN
Sbjct: 315 VVSRGLWGQPHGYYVEKHMNSQSGSPDGPLLNC--GGTSTTGGDSMDDGEDEKSDNN 369


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