BLASTX nr result

ID: Chrysanthemum21_contig00023579 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00023579
         (456 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021996437.1| putative F-box protein At3g17620 [Helianthus...    62   2e-08
ref|XP_022022352.1| F-box protein At2g21930-like [Helianthus ann...    55   7e-06
gb|OTF87725.1| putative F-box domain-containing protein [Heliant...    55   7e-06

>ref|XP_021996437.1| putative F-box protein At3g17620 [Helianthus annuus]
          Length = 357

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
 Frame = +3

Query: 3   VSFDLKSKKFGKVSLPDGLLLTRKLRVTEVNGSLXXXXXXXXXXXXXWMM---EFVSKSF 173
           +SFDL S++FG+V LPD L  +R L ++++N SL             WMM   +    SF
Sbjct: 221 ISFDLTSEEFGEVDLPDSLAGSRSLDISKLNESLLVLDYRGDAVCDVWMMSKSDIPKSSF 280

Query: 174 TKMFTVKIPHELLYKYNGVLEFRKNG 251
           TK+FTVK+P+        ++ FRKNG
Sbjct: 281 TKLFTVKVPNSF-----SIIGFRKNG 301


>ref|XP_022022352.1| F-box protein At2g21930-like [Helianthus annuus]
 ref|XP_022022353.1| F-box protein At2g21930-like [Helianthus annuus]
          Length = 410

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
 Frame = +3

Query: 3   VSFDLKSKKFGKVSLPDGLLLT---RKLRVTEVNGSLXXXXXXXXXXXXXWMME-FVSKS 170
           +SFD+ S++FG+V+LP+GL  +     LRV+++  SL             WMME  VSKS
Sbjct: 252 ISFDMTSEEFGEVNLPNGLAHSPDGHCLRVSKLGESLVVFEEADQMVYNVWMMEGDVSKS 311

Query: 171 FTKMFTVKIPHELLYKYNGVLEFRKNGD 254
           FTK FT+ +    L+    +L FRK+G+
Sbjct: 312 FTKRFTLNV--NALHHPQAILGFRKSGE 337


>gb|OTF87725.1| putative F-box domain-containing protein [Helianthus annuus]
          Length = 463

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
 Frame = +3

Query: 3   VSFDLKSKKFGKVSLPDGLLLT---RKLRVTEVNGSLXXXXXXXXXXXXXWMME-FVSKS 170
           +SFD+ S++FG+V+LP+GL  +     LRV+++  SL             WMME  VSKS
Sbjct: 288 ISFDMTSEEFGEVNLPNGLAHSPDGHCLRVSKLGESLVVFEEADQMVYNVWMMEGDVSKS 347

Query: 171 FTKMFTVKIPHELLYKYNGVLEFRKNGD 254
           FTK FT+ +    L+    +L FRK+G+
Sbjct: 348 FTKRFTLNV--NALHHPQAILGFRKSGE 373


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