BLASTX nr result

ID: Chrysanthemum21_contig00023389 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00023389
         (507 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI00718.1| Armadillo-type fold [Cynara cardunculus var. scol...    56   6e-06

>gb|KVI00718.1| Armadillo-type fold [Cynara cardunculus var. scolymus]
          Length = 720

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 11/89 (12%)
 Frame = -3

Query: 481 AEREVLDSEPSSTDAT*NNLGDDSRPNATDEPSKSAEYRDYTKPSVTITELAGPSQPVTD 302
           +E    +S+PSS D   ++   DS+ + TD+P +  E+RD  +PS TITE AG S+ VT+
Sbjct: 586 SETTTSESKPSSIDTAVSDSLTDSKTSETDKPPEWVEWRDSVEPSDTITEPAGTSESVTN 645

Query: 301 D-----------LENSQIESNEASPSCTT 248
           D            +NS     E SPSCTT
Sbjct: 646 DPPKGGHDPKPVTDNS--NKGEVSPSCTT 672


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