BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00023386
         (366 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023733412.1| protein LOW PSII ACCUMULATION 1, chloroplast...    83   3e-16
ref|XP_022010769.1| protein LOW PSII ACCUMULATION 1, chloroplast...    76   7e-14
gb|KVH94276.1| Protein of unknown function DUF3493 [Cynara cardu...    64   2e-09

>ref|XP_023733412.1| protein LOW PSII ACCUMULATION 1, chloroplastic [Lactuca sativa]
 gb|PLY74074.1| hypothetical protein LSAT_9X11980 [Lactuca sativa]
          Length = 328

 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 46/88 (52%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
 Frame = +2

Query: 107 MSTMTQLAIVTNGCTNIRQTSKRLAFSFHIDGHKLASV--VTGRTDIIRIINRRKSCLSV 280
           MSTM QLAIVT  CTN+ QTSK  +F+FHIDGHKLASV   T   D + I +R+K+ L V
Sbjct: 1   MSTMAQLAIVTAACTNLHQTSKCFSFTFHIDGHKLASVFTTTSGRDTVTIRSRKKAPLLV 60

Query: 281 ICSTAKPXXXXXXXXXXXXXXXVLTPFR 364
            CS +KP               VLTPFR
Sbjct: 61  TCSVSKPSSSTEISSTARIRSEVLTPFR 88


>ref|XP_022010769.1| protein LOW PSII ACCUMULATION 1, chloroplastic [Helianthus annuus]
 ref|XP_022010770.1| protein LOW PSII ACCUMULATION 1, chloroplastic [Helianthus annuus]
 gb|OTF94069.1| putative protein of unknown function DUF3493 [Helianthus annuus]
          Length = 328

 Score = 76.3 bits (186), Expect = 7e-14
 Identities = 47/90 (52%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
 Frame = +2

Query: 107 MSTMTQLAIVTNGCTNIRQTSKRLAFSFHIDGHKLASV----VTGRTDIIRIINRRKSCL 274
           MST+ QLAI+T G  N RQ  K L FSFHIDG KL SV     TGRTD IR  N  +  L
Sbjct: 1   MSTVAQLAIITTGSANFRQNFKCLGFSFHIDGRKLTSVFTATTTGRTDTIR--NGARGRL 58

Query: 275 SVICSTAKPXXXXXXXXXXXXXXXVLTPFR 364
            V CSTAKP               VLTPFR
Sbjct: 59  IVTCSTAKPSSSSEISSSARIRSEVLTPFR 88


>gb|KVH94276.1| Protein of unknown function DUF3493 [Cynara cardunculus var.
           scolymus]
          Length = 281

 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 42/87 (48%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = +2

Query: 107 MSTMTQLAIVTNGCTNIRQTSKRLAFSFHIDGHKLASVV-TGRTDIIRIINRRKSCLSVI 283
           MST+ QLA+VT  C N  +TSK L FSF    H L SVV T R     I NR K+ LSV 
Sbjct: 1   MSTVAQLAVVTGTCCNFHRTSKCLGFSF----HNLTSVVATTRIRTATIRNRAKAPLSVT 56

Query: 284 CSTAKPXXXXXXXXXXXXXXXVLTPFR 364
           CS AKP               VLTPFR
Sbjct: 57  CSAAKPSSSTEISSTARIRSEVLTPFR 83