BLASTX nr result

ID: Chrysanthemum21_contig00023330 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00023330
         (511 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY88677.1| hypothetical protein LSAT_5X31860 [Lactuca sativa]      47   2e-08
gb|PLY98699.1| hypothetical protein LSAT_4X136680 [Lactuca sativa]     49   5e-08
gb|KVI06841.1| Peptidase C48, SUMO/Sentrin/Ubl1, partial [Cynara...    50   9e-06

>gb|PLY88677.1| hypothetical protein LSAT_5X31860 [Lactuca sativa]
          Length = 286

 Score = 47.0 bits (110), Expect(2) = 2e-08
 Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
 Frame = -1

Query: 268 VSLSGRLRPN--DCGIFAMRHMEHYMGGQMIYWNCGIVEEGKKQTS 137
           V+++ R R N  D G+F MRHM+ YMG +++ W CG+ +E K+Q S
Sbjct: 194 VNMNWRTRDNHVDYGVFCMRHMKTYMGDKIVNWTCGLPKELKQQQS 239



 Score = 38.9 bits (89), Expect(2) = 2e-08
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = -3

Query: 509 FIPISNGSQKYVLCINLKYPEVNVFDNSRMRNKNGTAKVVYSVNASDLRVAEILRTNCAE 330
           F+P+   +  Y++CINL+ P V+V DN   RN N      Y    ++L++        + 
Sbjct: 123 FLPVHQKNYFYIICINLEEPAVDVIDN---RNSNAKFSRAYRDAPNELKIL------FSR 173

Query: 329 YLQHVKHVNA 300
           YL  V H +A
Sbjct: 174 YLMRVNHKSA 183


>gb|PLY98699.1| hypothetical protein LSAT_4X136680 [Lactuca sativa]
          Length = 410

 Score = 48.9 bits (115), Expect(2) = 5e-08
 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -1

Query: 268 VSLSGRLRPN--DCGIFAMRHMEHYMGGQMIYWNCGIVEEGKKQTS 137
           V+++ R R N  DCG+F MRH+E  MG + + W CG+ +E K+Q S
Sbjct: 310 VNMNWRTRDNHVDCGVFCMRHLETCMGDKTVNWTCGLPKESKQQQS 355



 Score = 35.8 bits (81), Expect(2) = 5e-08
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = -3

Query: 509 FIPISNGSQKYVLCINLKYPEVNVFDNSRMRNKNGTAKVVYSVNASDLRVAEILRTNCAE 330
           F+P+   +  Y++CINL+ P V+V DN   RN        Y    ++L++        + 
Sbjct: 239 FLPVHQKNHFYIICINLEEPAVDVIDN---RNSIAKFSRAYRDAPNELKIL------FSR 289

Query: 329 YLQHVKHVNA 300
           YL  V H +A
Sbjct: 290 YLMRVNHKSA 299


>gb|KVI06841.1| Peptidase C48, SUMO/Sentrin/Ubl1, partial [Cynara cardunculus var.
           scolymus]
          Length = 159

 Score = 50.1 bits (118), Expect(2) = 9e-06
 Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
 Frame = -1

Query: 268 VSLSGRLRPN--DCGIFAMRHMEHYMGGQMIYWNCGIVEEGKKQTSQ 134
           V +  R + N  DCG+FAMRHME + G +   W CG+V+EG K  +Q
Sbjct: 109 VDMDWRTKKNFVDCGVFAMRHMETFFGSKSKDWKCGLVKEGTKNKAQ 155



 Score = 26.9 bits (58), Expect(2) = 9e-06
 Identities = 20/70 (28%), Positives = 29/70 (41%)
 Frame = -3

Query: 509 FIPISNGSQKYVLCINLKYPEVNVFDNSRMRNKNGTAKVVYSVNASDLRVAEILRTNCAE 330
           F  +  G   Y++  NLK P   + DN    N   + + VY +      V E L +    
Sbjct: 38  FFIMLRGRHFYLVVFNLKKPSFLIIDNI---NHTQSIEEVYGI------VPETLHSLFCN 88

Query: 329 YLQHVKHVNA 300
           YL+ V H  A
Sbjct: 89  YLREVHHPKA 98


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