BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00023282
         (350 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH87043.1| RNA-processing protein, HAT helix [Cynara cardunc...    72   2e-12
ref|XP_022035507.1| pre-mRNA-processing factor 39 isoform X4 [He...    60   5e-08
ref|XP_022035506.1| pre-mRNA-processing factor 39 isoform X3 [He...    60   5e-08
ref|XP_022035505.1| pre-mRNA-processing factor 39 isoform X2 [He...    60   5e-08
ref|XP_022035504.1| pre-mRNA-processing factor 39 isoform X1 [He...    60   5e-08

>gb|KVH87043.1| RNA-processing protein, HAT helix [Cynara cardunculus var. scolymus]
          Length = 897

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 49/126 (38%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
 Frame = -3

Query: 339  PVSLESLSLCTQEEEPNDLTHKSSTALEDTMDPPTANQNSATDSPKRPDVTDEHGSE--- 169
            PVSLESLSL T+E+ PN L     +   +     T N  SAT+S K+ + T+EHGSE   
Sbjct: 654  PVSLESLSLLTREKGPNVLEDTVPSVNNENPSTSTRNPFSATESAKKQNGTEEHGSESLS 713

Query: 168  -----------TDPPQIPSQNAET-SKTNHMFTASEHVRPEPTAHMVTIAQLPNNDHPTV 25
                       TDP Q  SQN ET  KTNHM TASE    E         + P+   P +
Sbjct: 714  FSPGHRNLREQTDPQQYSSQNPETCCKTNHMLTASEDASAESDGQPRQHHRQPHQGFPLI 773

Query: 24   PNAAQN 7
              +  N
Sbjct: 774  HESTAN 779


>ref|XP_022035507.1| pre-mRNA-processing factor 39 isoform X4 [Helianthus annuus]
 ref|XP_022035508.1| pre-mRNA-processing factor 39 isoform X4 [Helianthus annuus]
          Length = 903

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
 Frame = -3

Query: 330 LESLSLCTQEEEPNDLTHKSSTALEDTMDPPTANQN------SATDSPKRPDVTDEHGSE 169
           LE L    +    ND  H S    + T +P  ++QN      SAT   K  ++  E   E
Sbjct: 612 LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 671

Query: 168 TDPPQIPSQNAETSKTNHMFTASEHV----RPEPTAHMVTIAQLPNNDHPTVPNAAQNGQ 1
           TDP QIPS+N ET +TN+M TASEHV    +P+  A         +N  P V    Q+ +
Sbjct: 672 TDPHQIPSRNTETCETNNMLTASEHVPNVQQPQNPATAAQSHVFTHNGQPVVQYPVQSNE 731


>ref|XP_022035506.1| pre-mRNA-processing factor 39 isoform X3 [Helianthus annuus]
          Length = 920

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
 Frame = -3

Query: 330 LESLSLCTQEEEPNDLTHKSSTALEDTMDPPTANQN------SATDSPKRPDVTDEHGSE 169
           LE L    +    ND  H S    + T +P  ++QN      SAT   K  ++  E   E
Sbjct: 629 LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 688

Query: 168 TDPPQIPSQNAETSKTNHMFTASEHV----RPEPTAHMVTIAQLPNNDHPTVPNAAQNGQ 1
           TDP QIPS+N ET +TN+M TASEHV    +P+  A         +N  P V    Q+ +
Sbjct: 689 TDPHQIPSRNTETCETNNMLTASEHVPNVQQPQNPATAAQSHVFTHNGQPVVQYPVQSNE 748


>ref|XP_022035505.1| pre-mRNA-processing factor 39 isoform X2 [Helianthus annuus]
 gb|OTG29091.1| putative tetratricopeptide-like helical domain-containing protein
           [Helianthus annuus]
          Length = 925

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
 Frame = -3

Query: 330 LESLSLCTQEEEPNDLTHKSSTALEDTMDPPTANQN------SATDSPKRPDVTDEHGSE 169
           LE L    +    ND  H S    + T +P  ++QN      SAT   K  ++  E   E
Sbjct: 634 LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 693

Query: 168 TDPPQIPSQNAETSKTNHMFTASEHV----RPEPTAHMVTIAQLPNNDHPTVPNAAQNGQ 1
           TDP QIPS+N ET +TN+M TASEHV    +P+  A         +N  P V    Q+ +
Sbjct: 694 TDPHQIPSRNTETCETNNMLTASEHVPNVQQPQNPATAAQSHVFTHNGQPVVQYPVQSNE 753


>ref|XP_022035504.1| pre-mRNA-processing factor 39 isoform X1 [Helianthus annuus]
          Length = 926

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
 Frame = -3

Query: 330 LESLSLCTQEEEPNDLTHKSSTALEDTMDPPTANQN------SATDSPKRPDVTDEHGSE 169
           LE L    +    ND  H S    + T +P  ++QN      SAT   K  ++  E   E
Sbjct: 635 LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 694

Query: 168 TDPPQIPSQNAETSKTNHMFTASEHV----RPEPTAHMVTIAQLPNNDHPTVPNAAQNGQ 1
           TDP QIPS+N ET +TN+M TASEHV    +P+  A         +N  P V    Q+ +
Sbjct: 695 TDPHQIPSRNTETCETNNMLTASEHVPNVQQPQNPATAAQSHVFTHNGQPVVQYPVQSNE 754