BLASTX nr result

ID: Chrysanthemum21_contig00023234 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00023234
         (488 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY66267.1| hypothetical protein LSAT_3X37701 [Lactuca sativa]      60   4e-09

>gb|PLY66267.1| hypothetical protein LSAT_3X37701 [Lactuca sativa]
          Length = 74

 Score = 60.1 bits (144), Expect = 4e-09
 Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +2

Query: 8   MFQEY*LFLFSTIKKAIMFAFFSCFLGSKKV-AIEGIRIFSEAHYVHDDHEEXXXXXXXX 184
           M++ + + +F  IK AI+   FSCFLGS +V A+EG +   E   V  DHE         
Sbjct: 1   MYEIFPILVFRRIKMAILLGLFSCFLGSNRVVAVEGNQ--REDDNVDGDHEAKSKCRKS- 57

Query: 185 AAIPVSYFPVGSNLSCM 235
           AAIPV+YFPVGSN SC+
Sbjct: 58  AAIPVAYFPVGSNRSCL 74


Top