BLASTX nr result

ID: Chrysanthemum21_contig00023233 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00023233
         (648 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY66267.1| hypothetical protein LSAT_3X37701 [Lactuca sativa]      70   1e-12

>gb|PLY66267.1| hypothetical protein LSAT_3X37701 [Lactuca sativa]
          Length = 74

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +1

Query: 37  MFPEYSVFLFNTIKKAIMFGFFSCFLGSKKV-AIEGITPSEAHYVHDDHEEXXXXXXXAA 213
           M+  + + +F  IK AI+ G FSCFLGS +V A+EG    E   V  DHE        AA
Sbjct: 1   MYEIFPILVFRRIKMAILLGLFSCFLGSNRVVAVEG-NQREDDNVDGDHEAKSKCRKSAA 59

Query: 214 IPVAYFPVGSNLSCL 258
           IPVAYFPVGSN SCL
Sbjct: 60  IPVAYFPVGSNRSCL 74


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