BLASTX nr result

ID: Chrysanthemum21_contig00023208 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00023208
         (408 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023740342.1| ubiquitin-like-specific protease 1D [Lactuca...    67   3e-10
ref|XP_023729402.1| uncharacterized protein LOC111877097 [Lactuc...    59   3e-08
gb|KVH96072.1| Peptidase C48, SUMO/Sentrin/Ubl1, partial [Cynara...    60   8e-08

>ref|XP_023740342.1| ubiquitin-like-specific protease 1D [Lactuca sativa]
 gb|PLY68812.1| hypothetical protein LSAT_3X48100 [Lactuca sativa]
          Length = 526

 Score = 67.0 bits (162), Expect = 3e-10
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 19/102 (18%)
 Frame = +3

Query: 51  PLTPDWNHLLPPSTGDDGRPLE------------------NSYESVDLKLVMKSDRQLNE 176
           PL  DW  LLP S+GDD RP E                     +  DL+L  KS  ++ E
Sbjct: 17  PLRLDWEELLPSSSGDDDRPPELLVRSKKKFKGGGSGTDAQENQMEDLELQTKSLNEITE 76

Query: 177 TLASFKNNL-KLCPKLRDGGQKLKENIKRYEDELERRLKGQS 299
           ++  FK NL  L  KL D G+KLK  ++RYE+ELERR K +S
Sbjct: 77  SITRFKKNLVTLAKKLPDNGEKLKGTLQRYENELERRNKLKS 118


>ref|XP_023729402.1| uncharacterized protein LOC111877097 [Lactuca sativa]
 gb|PLY77253.1| hypothetical protein LSAT_3X45040 [Lactuca sativa]
          Length = 145

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 42/107 (39%), Positives = 54/107 (50%), Gaps = 19/107 (17%)
 Frame = +3

Query: 54  LTPDWNHLLPPSTGDDGRPLENSYESV------------------DLKLVMKSDRQLNET 179
           L  +W  LLP S+ +D RP E    S                   DL+L  KSD ++ E 
Sbjct: 17  LAINWKQLLPSSSDEDNRPTELQVTSKRKSKCGRSESDAQENHKEDLELQTKSDDEITEY 76

Query: 180 LASFKNNL-KLCPKLRDGGQKLKENIKRYEDELERRLKGQSMQKIRP 317
           +A  K  L  L  KL D G KLK  ++RYEDELERR K Q ++K+ P
Sbjct: 77  IARSKRFLVTLIDKLPDRGDKLKATLQRYEDELERRNKLQ-LEKVLP 122


>gb|KVH96072.1| Peptidase C48, SUMO/Sentrin/Ubl1, partial [Cynara cardunculus var.
           scolymus]
          Length = 618

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
 Frame = +3

Query: 51  PLTPDWNHLLPPSTGDDGRPLE----NSYESVD--------------LKLVMKSDRQLNE 176
           PLT DW  LLP ++ DD RP E    +  +S D               +L+ KSD ++NE
Sbjct: 72  PLTLDWEQLLPTASADDDRPPELVVKSEKKSKDGSSGGDAEQDQKEHFELLSKSDHEINE 131

Query: 177 TLASFKNNLK-LCPKLRDGGQKLKENIKRYEDELERRLKGQS 299
            +A  K  ++ L  KL D G+KLK   +R+ +ELERR K QS
Sbjct: 132 YIARHKTVMQTLSSKLPDKGEKLKATFRRHVEELERRKKLQS 173


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