BLASTX nr result

ID: Chrysanthemum21_contig00023136 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00023136
         (417 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY63874.1| hypothetical protein LSAT_1X94380 [Lactuca sativa]      81   3e-15
ref|XP_023746935.1| uncharacterized protein LOC111895052 [Lactuc...    68   9e-11

>gb|PLY63874.1| hypothetical protein LSAT_1X94380 [Lactuca sativa]
          Length = 385

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 38/109 (34%), Positives = 71/109 (65%), Gaps = 4/109 (3%)
 Frame = -3

Query: 415 MVSEKAKEIWTGIQNDAATSSSTPAEICLKWLKRVPGHLKGRSAPKKEILANVRLREQVE 236
           MV+E A EIW  + N+ A+SS +PAEIC+K L R+PG++KGRS   K++L   +L+  +E
Sbjct: 274 MVNEMAGEIWNELLNEEASSSCSPAEICMKKLHRIPGYIKGRSVSTKQVLGTEKLQMDLE 333

Query: 235 HERKRAEASEEKV----QQLTEMCSTLLKENEDTKRKMGYVLDQLAHFT 101
            E+++++A EE++    ++  +     +K  E+  +KM +++ +L+  +
Sbjct: 334 LEKEKSKAVEEEIPVIKEEQLQFQEEQIKYREEQNKKMEFMMSELSRLS 382


>ref|XP_023746935.1| uncharacterized protein LOC111895052 [Lactuca sativa]
 ref|XP_023746936.1| uncharacterized protein LOC111895052 [Lactuca sativa]
          Length = 269

 Score = 67.8 bits (164), Expect = 9e-11
 Identities = 31/95 (32%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
 Frame = -3

Query: 373 NDAATSSSTPAEICLKWLKRVPGHLKGRSAPKKEILANVRLREQVEHERKRAEASEEKV- 197
           N+ A+SS +PAEIC+K L R+PG++KGRS   K++L   +L+  +E E+++++A EE++ 
Sbjct: 172 NEEASSSCSPAEICMKKLHRIPGYIKGRSVSTKQVLGTEKLQMDLELEKEKSKAVEEEIP 231

Query: 196 ---QQLTEMCSTLLKENEDTKRKMGYVLDQLAHFT 101
              ++  +     +K  E+  +KM +++ +L+  +
Sbjct: 232 VIKEEQLQFQEEQIKYREEQNKKMEFMMSELSRLS 266


Top