BLASTX nr result

ID: Chrysanthemum21_contig00022938 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00022938
         (421 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH94738.1| hypothetical protein Ccrd_003204 [Cynara carduncu...    52   2e-06
gb|PLY99275.1| hypothetical protein LSAT_5X162741 [Lactuca sativa]     51   5e-06

>gb|KVH94738.1| hypothetical protein Ccrd_003204 [Cynara cardunculus var. scolymus]
          Length = 66

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 30/66 (45%), Positives = 33/66 (50%)
 Frame = +3

Query: 54  MAQISIXXXXXXXXXXXXXXXXXXXXQEFAPAPVPGPFTGAGFSAQASGVMIGASLVLSL 233
           MAQ+SI                    QE A AP P P  GA FS  A+G MIG SL+LS 
Sbjct: 1   MAQLSIVKKASVVALVALSAAATVSAQELAMAPAPSPDAGAAFSVPATGFMIGTSLLLSF 60

Query: 234 VTFLRN 251
           V FLRN
Sbjct: 61  VAFLRN 66


>gb|PLY99275.1| hypothetical protein LSAT_5X162741 [Lactuca sativa]
          Length = 65

 Score = 51.2 bits (121), Expect = 5e-06
 Identities = 25/37 (67%), Positives = 26/37 (70%)
 Frame = +3

Query: 141 APAPVPGPFTGAGFSAQASGVMIGASLVLSLVTFLRN 251
           A AP P P  GA FS Q SGVMIG SL+LSLV F RN
Sbjct: 29  ATAPAPSPDAGAAFSVQVSGVMIGTSLLLSLVAFFRN 65


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