BLASTX nr result

ID: Chrysanthemum21_contig00022859 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00022859
         (404 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI01163.1| hypothetical protein Ccrd_020584 [Cynara carduncu...   104   2e-23
ref|XP_023756638.1| protein trichome birefringence-like 14 [Lact...    96   2e-20
ref|XP_023744355.1| protein trichome birefringence-like 16 [Lact...    62   1e-08

>gb|KVI01163.1| hypothetical protein Ccrd_020584 [Cynara cardunculus var. scolymus]
          Length = 575

 Score =  104 bits (259), Expect = 2e-23
 Identities = 71/133 (53%), Positives = 81/133 (60%), Gaps = 14/133 (10%)
 Frame = +1

Query: 46  FIAVVLVFSIVLVWYWEKAPLLTTLFPSHSQLLNLFPAGDVKVKQVTTDLRQAQGVVN-I 222
           FI VVL  + ++VWYWEK PLLTTL PSH Q+L LFPAG+VKVKQV  DL +A GVVN +
Sbjct: 21  FIGVVL--TTIVVWYWEKTPLLTTLLPSHGQVLQLFPAGEVKVKQV-DDLTEADGVVNLV 77

Query: 223 SPPLTSDNTSSSFDTRGNKGVLDLVSTA----PPSFDI-----STTA----HENTTDNVK 363
           SPP  S       D RGN GV+D VS       PS DI     S TA    HENTT  V 
Sbjct: 78  SPP--SSRNKPPLDIRGN-GVVDSVSPLSSINTPSSDIRGDKYSMTAQEKHHENTTSRVG 134

Query: 364 QSVPSHVSENRSD 402
           + V   VSE  +D
Sbjct: 135 KPVSGEVSERHND 147


>ref|XP_023756638.1| protein trichome birefringence-like 14 [Lactuca sativa]
 ref|XP_023756647.1| protein trichome birefringence-like 14 [Lactuca sativa]
 ref|XP_023756653.1| protein trichome birefringence-like 14 [Lactuca sativa]
 gb|PLY98943.1| hypothetical protein LSAT_7X35180 [Lactuca sativa]
          Length = 521

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 61/135 (45%), Positives = 86/135 (63%), Gaps = 18/135 (13%)
 Frame = +1

Query: 40  SLFIAVVLVFSIVLVWYWEKAPLLTTLFPSHSQLLNLFPAGDVKVKQVT---TDLRQAQG 210
           SLF  + +VF+ ++VW WEK PLLTTL PSHSQ++ LFPAG VKVKQ T    D R+A+ 
Sbjct: 15  SLFF-IGVVFTTIVVWSWEKTPLLTTLLPSHSQVMQLFPAGGVKVKQGTQSKDDFREAEV 73

Query: 211 VVNISPPLTSDNTSSSFDTRGNKGVLDLVSTA------PPSFDI-----STTA----HEN 345
           V N++ P++S N  S     G +G++DL+S +       PS DI     S+T+    HE+
Sbjct: 74  VPNVTYPISSINAPSIL---GEEGLVDLISPSTLSPINTPSLDIHGGESSSTSQENHHES 130

Query: 346 TTDNVKQSVPSHVSE 390
           TT+ +++ V S VSE
Sbjct: 131 TTNIIEKPVSSEVSE 145


>ref|XP_023744355.1| protein trichome birefringence-like 16 [Lactuca sativa]
 gb|PLY65736.1| hypothetical protein LSAT_5X139981 [Lactuca sativa]
          Length = 498

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
 Frame = +1

Query: 40  SLFIAVVLVFSIVLVWYWEKAPLLTTLFPSHSQLLNLFPAGDVK-----VKQVTTDLRQA 204
           SLF  V +  SIV VW WEK P LTTL P H Q L++FP  ++K     V +V  D ++ 
Sbjct: 17  SLFFIVFVCASIV-VWNWEKTPRLTTLLPPHDQTLHIFP-DELKREREHVTEVKQDFKED 74

Query: 205 QGVVNISPPLTSDNTSSSFDTRGNKGVLDLVSTAPPSFDISTTAHENTTDNVKQSVPSHV 384
           + VVNI PP  S NT +S +TR                D S T HEN  ++    +   +
Sbjct: 75  KPVVNILPPSLSTNT-ASLNTRQ---------------DESPTTHENHHES-NAIIEKSI 117

Query: 385 SENRSD 402
           SE   D
Sbjct: 118 SEGDDD 123


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