BLASTX nr result
ID: Chrysanthemum21_contig00022741
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00022741
(728 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_023770445.1| RNA-binding protein 28 isoform X2 [Lactuca s... 117 3e-26
ref|XP_023770444.1| RNA-binding protein 28 isoform X1 [Lactuca s... 117 3e-26
gb|PLY80355.1| hypothetical protein LSAT_7X91680 [Lactuca sativa] 117 3e-26
ref|XP_022018497.1| RNA-binding protein 28 isoform X2 [Helianthu... 114 2e-25
ref|XP_022018496.1| RNA-binding protein 28 isoform X1 [Helianthu... 114 2e-25
gb|KVI10688.1| Nucleotide-binding, alpha-beta plait, partial [Cy... 110 7e-24
ref|XP_023920740.1| RNA-binding protein 28-like isoform X1 [Quer... 105 3e-22
gb|POE99993.1| isoform 2 of rna-binding protein 28 [Quercus suber] 105 3e-22
ref|XP_008347431.1| PREDICTED: RNA-binding protein 28-like [Malu... 99 3e-22
dbj|GAV72115.1| RRM_1 domain-containing protein/RRM_6 domain-con... 105 4e-22
gb|OMO74367.1| hypothetical protein CCACVL1_16792 [Corchorus cap... 103 1e-21
gb|OMO75596.1| hypothetical protein COLO4_26000 [Corchorus olito... 96 2e-21
ref|XP_010647688.1| PREDICTED: RNA-binding protein 28 isoform X1... 102 3e-21
ref|XP_018501063.1| PREDICTED: RNA-binding protein 28-like isofo... 102 6e-21
ref|XP_009347848.1| PREDICTED: RNA-binding protein 28-like isofo... 102 6e-21
ref|XP_021827968.1| RNA-binding protein 28 [Prunus avium] 101 8e-21
ref|XP_008382312.1| PREDICTED: RNA-binding protein 28 isoform X2... 100 1e-20
ref|XP_008382311.1| PREDICTED: RNA-binding protein 28 isoform X1... 100 1e-20
ref|XP_022011983.1| uncharacterized protein LOC110911667 isoform... 100 2e-20
ref|XP_022011982.1| uncharacterized protein LOC110911667 isoform... 100 2e-20
>ref|XP_023770445.1| RNA-binding protein 28 isoform X2 [Lactuca sativa]
Length = 961
Score = 117 bits (293), Expect = 3e-26
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GST HRGFGYVQFAVTEDA RAIELK+G+SVGGRT+GVKHATHRAPLEQRR KG EV+PS
Sbjct: 56 GSTVHRGFGYVQFAVTEDATRAIELKNGASVGGRTIGVKHATHRAPLEQRRSKGTEVLPS 115
Query: 16 DDAVK 2
DD +K
Sbjct: 116 DDTIK 120
>ref|XP_023770444.1| RNA-binding protein 28 isoform X1 [Lactuca sativa]
Length = 998
Score = 117 bits (293), Expect = 3e-26
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GST HRGFGYVQFAVTEDA RAIELK+G+SVGGRT+GVKHATHRAPLEQRR KG EV+PS
Sbjct: 56 GSTVHRGFGYVQFAVTEDATRAIELKNGASVGGRTIGVKHATHRAPLEQRRSKGTEVLPS 115
Query: 16 DDAVK 2
DD +K
Sbjct: 116 DDTIK 120
>gb|PLY80355.1| hypothetical protein LSAT_7X91680 [Lactuca sativa]
Length = 1002
Score = 117 bits (293), Expect = 3e-26
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GST HRGFGYVQFAVTEDA RAIELK+G+SVGGRT+GVKHATHRAPLEQRR KG EV+PS
Sbjct: 60 GSTVHRGFGYVQFAVTEDATRAIELKNGASVGGRTIGVKHATHRAPLEQRRSKGTEVLPS 119
Query: 16 DDAVK 2
DD +K
Sbjct: 120 DDTIK 124
>ref|XP_022018497.1| RNA-binding protein 28 isoform X2 [Helianthus annuus]
Length = 982
Score = 114 bits (286), Expect = 2e-25
Identities = 53/65 (81%), Positives = 59/65 (90%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GSTEHRGF +VQFA T+DA RAIELK+GSSVGGRT+GVKHA HRAPLEQRR KGNEV+PS
Sbjct: 90 GSTEHRGFAFVQFAATDDAKRAIELKNGSSVGGRTIGVKHAMHRAPLEQRRSKGNEVLPS 149
Query: 16 DDAVK 2
DD +K
Sbjct: 150 DDTIK 154
>ref|XP_022018496.1| RNA-binding protein 28 isoform X1 [Helianthus annuus]
gb|OTF90935.1| putative RNA-binding (RRM/RBD/RNP motifs) family protein
[Helianthus annuus]
Length = 1019
Score = 114 bits (286), Expect = 2e-25
Identities = 53/65 (81%), Positives = 59/65 (90%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GSTEHRGF +VQFA T+DA RAIELK+GSSVGGRT+GVKHA HRAPLEQRR KGNEV+PS
Sbjct: 90 GSTEHRGFAFVQFAATDDAKRAIELKNGSSVGGRTIGVKHAMHRAPLEQRRSKGNEVLPS 149
Query: 16 DDAVK 2
DD +K
Sbjct: 150 DDTIK 154
>gb|KVI10688.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
var. scolymus]
Length = 931
Score = 110 bits (275), Expect = 7e-24
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNE 29
GSTEHRGFG+VQFAVTEDANRAIELK+GSSVGGRT+GVKHATHRAPLEQRR KGNE
Sbjct: 60 GSTEHRGFGFVQFAVTEDANRAIELKNGSSVGGRTIGVKHATHRAPLEQRRSKGNE 115
>ref|XP_023920740.1| RNA-binding protein 28-like isoform X1 [Quercus suber]
ref|XP_023920742.1| RNA-binding protein 28-like isoform X2 [Quercus suber]
ref|XP_023920743.1| RNA-binding protein 28-like isoform X3 [Quercus suber]
Length = 1005
Score = 105 bits (263), Expect = 3e-22
Identities = 51/65 (78%), Positives = 56/65 (86%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GSTEHRGFG+VQFAVTEDANR+IELK+GSSVGGR + VKHA HRAPLEQRR K +VV S
Sbjct: 58 GSTEHRGFGFVQFAVTEDANRSIELKNGSSVGGRKIAVKHAMHRAPLEQRRSKQGQVVQS 117
Query: 16 DDAVK 2
DD K
Sbjct: 118 DDNAK 122
>gb|POE99993.1| isoform 2 of rna-binding protein 28 [Quercus suber]
Length = 1196
Score = 105 bits (263), Expect = 3e-22
Identities = 51/65 (78%), Positives = 56/65 (86%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GSTEHRGFG+VQFAVTEDANR+IELK+GSSVGGR + VKHA HRAPLEQRR K +VV S
Sbjct: 58 GSTEHRGFGFVQFAVTEDANRSIELKNGSSVGGRKIAVKHAMHRAPLEQRRSKQGQVVQS 117
Query: 16 DDAVK 2
DD K
Sbjct: 118 DDNAK 122
Score = 80.1 bits (196), Expect = 2e-13
Identities = 40/54 (74%), Positives = 44/54 (81%)
Frame = -2
Query: 163 QFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPSDDAVK 2
Q AVTEDANR+IELK+GSSVGGR + VKHA HRAPLEQRR K +VV SDD K
Sbjct: 190 QNAVTEDANRSIELKNGSSVGGRKIAVKHAMHRAPLEQRRSKQGQVVQSDDNAK 243
>ref|XP_008347431.1| PREDICTED: RNA-binding protein 28-like [Malus domestica]
Length = 147
Score = 98.6 bits (244), Expect = 3e-22
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GSTEH GFG+VQFAVTEDANRA+ELK+G S+GGR + KHA HRAPLEQRRPK N+
Sbjct: 59 GSTEHHGFGFVQFAVTEDANRAVELKNGLSIGGRKIAAKHAMHRAPLEQRRPKTNQGTDV 118
Query: 16 DDAVK 2
++ VK
Sbjct: 119 EETVK 123
>dbj|GAV72115.1| RRM_1 domain-containing protein/RRM_6 domain-containing protein
[Cephalotus follicularis]
Length = 977
Score = 105 bits (262), Expect = 4e-22
Identities = 49/65 (75%), Positives = 55/65 (84%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GS +HRGFGYVQFA+TEDANRA+ELK+ SSVGGRT+ VKHA HRAPLEQRR K +VV S
Sbjct: 54 GSAKHRGFGYVQFALTEDANRAVELKNSSSVGGRTIAVKHAAHRAPLEQRRSKAGQVVAS 113
Query: 16 DDAVK 2
DD K
Sbjct: 114 DDVTK 118
>gb|OMO74367.1| hypothetical protein CCACVL1_16792 [Corchorus capsularis]
Length = 1296
Score = 103 bits (258), Expect = 1e-21
Identities = 52/65 (80%), Positives = 55/65 (84%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GSTEHRGFGYVQFAVTEDANRAIELK+GSSVGGR + VKHA HRA LEQRR K +V S
Sbjct: 54 GSTEHRGFGYVQFAVTEDANRAIELKNGSSVGGRKIVVKHAAHRASLEQRRAKQGLLVAS 113
Query: 16 DDAVK 2
DDA K
Sbjct: 114 DDATK 118
>gb|OMO75596.1| hypothetical protein COLO4_26000 [Corchorus olitorius]
Length = 131
Score = 96.3 bits (238), Expect = 2e-21
Identities = 46/62 (74%), Positives = 53/62 (85%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GSTEHRGFGYVQFAVTEDANRAIELK+GSSVGGR + VKHA HRA LEQRR K ++ +
Sbjct: 54 GSTEHRGFGYVQFAVTEDANRAIELKNGSSVGGRKIVVKHAAHRASLEQRRAKQDDATKA 113
Query: 16 DD 11
++
Sbjct: 114 EN 115
>ref|XP_010647688.1| PREDICTED: RNA-binding protein 28 isoform X1 [Vitis vinifera]
Length = 957
Score = 102 bits (255), Expect = 3e-21
Identities = 49/65 (75%), Positives = 55/65 (84%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GSTEHRGFG+VQFAV EDANRAIELK+GSS+GGR +GVK A HR PLEQRR K N+ V S
Sbjct: 55 GSTEHRGFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHS 114
Query: 16 DDAVK 2
DD +K
Sbjct: 115 DDIIK 119
>ref|XP_018501063.1| PREDICTED: RNA-binding protein 28-like isoform X2 [Pyrus x
bretschneideri]
Length = 1006
Score = 102 bits (253), Expect = 6e-21
Identities = 47/65 (72%), Positives = 54/65 (83%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GS+EHRGFG+VQFAVTEDANRA+ELK+G S+GGR + KHA HRAPLEQRRPK N+
Sbjct: 59 GSSEHRGFGFVQFAVTEDANRAVELKNGLSIGGRKIAAKHAMHRAPLEQRRPKTNQGTDV 118
Query: 16 DDAVK 2
DD VK
Sbjct: 119 DDTVK 123
>ref|XP_009347848.1| PREDICTED: RNA-binding protein 28-like isoform X1 [Pyrus x
bretschneideri]
Length = 1016
Score = 102 bits (253), Expect = 6e-21
Identities = 47/65 (72%), Positives = 54/65 (83%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GS+EHRGFG+VQFAVTEDANRA+ELK+G S+GGR + KHA HRAPLEQRRPK N+
Sbjct: 59 GSSEHRGFGFVQFAVTEDANRAVELKNGLSIGGRKIAAKHAMHRAPLEQRRPKTNQGTDV 118
Query: 16 DDAVK 2
DD VK
Sbjct: 119 DDTVK 123
>ref|XP_021827968.1| RNA-binding protein 28 [Prunus avium]
Length = 1004
Score = 101 bits (252), Expect = 8e-21
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GSTEHRGFGYVQFAVTEDANRAIELK+G S+GGR + KHA HRAPLEQRR K N+ +
Sbjct: 57 GSTEHRGFGYVQFAVTEDANRAIELKNGVSIGGRKIAAKHAMHRAPLEQRRSKTNQGLDL 116
Query: 16 DDAVK 2
DD +K
Sbjct: 117 DDTLK 121
>ref|XP_008382312.1| PREDICTED: RNA-binding protein 28 isoform X2 [Malus domestica]
Length = 1055
Score = 100 bits (250), Expect = 1e-20
Identities = 46/65 (70%), Positives = 54/65 (83%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GSTEHRGFG+VQFAV EDANRA+ELK+G S+GGR + KHA HRAPLEQRRPK N+ +
Sbjct: 59 GSTEHRGFGFVQFAVIEDANRAVELKNGLSIGGRKIAAKHAMHRAPLEQRRPKTNQGIDV 118
Query: 16 DDAVK 2
D+ VK
Sbjct: 119 DETVK 123
>ref|XP_008382311.1| PREDICTED: RNA-binding protein 28 isoform X1 [Malus domestica]
Length = 1055
Score = 100 bits (250), Expect = 1e-20
Identities = 46/65 (70%), Positives = 54/65 (83%)
Frame = -2
Query: 196 GSTEHRGFGYVQFAVTEDANRAIELKHGSSVGGRTVGVKHATHRAPLEQRRPKGNEVVPS 17
GSTEHRGFG+VQFAV EDANRA+ELK+G S+GGR + KHA HRAPLEQRRPK N+ +
Sbjct: 59 GSTEHRGFGFVQFAVIEDANRAVELKNGLSIGGRKIAAKHAMHRAPLEQRRPKTNQGIDV 118
Query: 16 DDAVK 2
D+ VK
Sbjct: 119 DETVK 123
>ref|XP_022011983.1| uncharacterized protein LOC110911667 isoform X2 [Helianthus annuus]
Length = 838
Score = 100 bits (249), Expect = 2e-20
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 534 ELNIQEERHIDEPEQDVPSVVIPNHLQV*SAECSHLSFGSFGATMNPEISGSFGSRKL-S 710
+LNIQEERH+DEPE DVPSVVIPNHLQV +A CSHLSFGSFG+TMNP S F SR+L +
Sbjct: 352 QLNIQEERHLDEPEDDVPSVVIPNHLQVQTANCSHLSFGSFGSTMNPGFSEPFASRQLRN 411
Query: 711 KVEDEP 728
K+ED P
Sbjct: 412 KLEDTP 417
>ref|XP_022011982.1| uncharacterized protein LOC110911667 isoform X1 [Helianthus annuus]
gb|OTF95161.1| Kinase-related Protein of unknown function (DUF1296) [Helianthus
annuus]
Length = 839
Score = 100 bits (249), Expect = 2e-20
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Frame = +3
Query: 534 ELNIQEERHIDEPEQDVPSVVIPNHLQV*SAECSHLSFGSFGATMNPEISGSFGSRKL-S 710
+LNIQEERH+DEPE DVPSVVIPNHLQV +A CSHLSFGSFG+TMNP S F SR+L +
Sbjct: 352 QLNIQEERHLDEPEDDVPSVVIPNHLQVQTANCSHLSFGSFGSTMNPGFSEPFASRQLRN 411
Query: 711 KVEDEP 728
K+ED P
Sbjct: 412 KLEDTP 417