BLASTX nr result

ID: Chrysanthemum21_contig00022274 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00022274
         (413 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI08712.1| DNA mismatch repair, conserved site-containing pr...   167   4e-45
gb|OTF98158.1| putative DNA mismatch repair protein family [Heli...   119   2e-28
ref|XP_022009796.1| DNA mismatch repair protein MLH3 [Helianthus...   119   2e-28
ref|XP_023767386.1| DNA mismatch repair protein MLH3 [Lactuca sa...    82   1e-15
gb|PLY82751.1| hypothetical protein LSAT_2X73681 [Lactuca sativa]      82   1e-15

>gb|KVI08712.1| DNA mismatch repair, conserved site-containing protein [Cynara
           cardunculus var. scolymus]
          Length = 1257

 Score =  167 bits (422), Expect = 4e-45
 Identities = 85/138 (61%), Positives = 100/138 (72%), Gaps = 1/138 (0%)
 Frame = +1

Query: 1   EYMDHLLDAKWNPASLHTVGSSENRLVVKELSAVPFHFDSDGQNIHDGSMKPFLRRCSSH 180
           EY+DHL DAKWNP SL T   + NRLVVKE SAVP H+  D + + D  ++PFLR CSSH
Sbjct: 511 EYVDHLSDAKWNPNSLQTDYGTNNRLVVKEPSAVPLHYYDDDEEVDDDLIRPFLRSCSSH 570

Query: 181 KDVPAVVASTRGDDLFRSQADGFKKWLYMDDRFDFKKADHRIKGSEPWL-NAATVWSPLR 357
           K +  VV S RGD+ FR QADG  KWL MDDR D+ +AD+ I+GSEPWL +AATVWSP R
Sbjct: 571 KGLLPVVGSKRGDNQFRFQADGSSKWLCMDDRVDYGQADYAIQGSEPWLDDAATVWSPPR 630

Query: 358 ITTSSNLGTYSPLLLKGS 411
            TT+ NLGT S  L KGS
Sbjct: 631 NTTTFNLGTGSSFLSKGS 648


>gb|OTF98158.1| putative DNA mismatch repair protein family [Helianthus annuus]
          Length = 1085

 Score =  119 bits (298), Expect = 2e-28
 Identities = 65/119 (54%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
 Frame = +1

Query: 22  DAKWNPASLHTVGSSENRLVVKELSAVPFHFDSDGQNIHDGSMKPFLRRCSSHKDVPAVV 201
           DAKW+P +L+T  ++ N+ +VK  S + FHFD       D  MKPF+R CSSH D+  VV
Sbjct: 440 DAKWHPKTLYTGCNTSNKSLVKHASPISFHFD-------DNLMKPFMRSCSSHMDMLRVV 492

Query: 202 ASTRGDDLFRSQADGFKKWLYMDD-RFDFKKADHRIK-GSEPWL-NAATVWSPLRITTS 369
            STRGDD FR QAD FKKWL MDD R D ++ +  I  GSEPWL +  T+WSP RITTS
Sbjct: 493 KSTRGDDKFRFQADKFKKWLDMDDNRVDVEEENDNITLGSEPWLDDGVTIWSPPRITTS 551


>ref|XP_022009796.1| DNA mismatch repair protein MLH3 [Helianthus annuus]
          Length = 1109

 Score =  119 bits (298), Expect = 2e-28
 Identities = 65/119 (54%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
 Frame = +1

Query: 22  DAKWNPASLHTVGSSENRLVVKELSAVPFHFDSDGQNIHDGSMKPFLRRCSSHKDVPAVV 201
           DAKW+P +L+T  ++ N+ +VK  S + FHFD       D  MKPF+R CSSH D+  VV
Sbjct: 464 DAKWHPKTLYTGCNTSNKSLVKHASPISFHFD-------DNLMKPFMRSCSSHMDMLRVV 516

Query: 202 ASTRGDDLFRSQADGFKKWLYMDD-RFDFKKADHRIK-GSEPWL-NAATVWSPLRITTS 369
            STRGDD FR QAD FKKWL MDD R D ++ +  I  GSEPWL +  T+WSP RITTS
Sbjct: 517 KSTRGDDKFRFQADKFKKWLDMDDNRVDVEEENDNITLGSEPWLDDGVTIWSPPRITTS 575


>ref|XP_023767386.1| DNA mismatch repair protein MLH3 [Lactuca sativa]
          Length = 1024

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 53/138 (38%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
 Frame = +1

Query: 1   EYMDHLLDAKWNPASLHTVGSSENRLVVKELSAVPFHFDSDGQNIHDGSMKPFLRRCSSH 180
           ++M HL DAKWNP          N+L++KE S + FHFD+         +KPFLR CSSH
Sbjct: 386 KHMSHLSDAKWNP---------NNKLLLKESSPIQFHFDNH-------LIKPFLRSCSSH 429

Query: 181 KDVPAVVASTRGDDLFRSQADGFKKWLYMDDRFDFKKADHRIKGSEPWLN-AATVWSPLR 357
            D+  VV   + D+                        D+ I+GSE WL+ + TVWSP R
Sbjct: 430 LDLSPVVTKIQDDEF-----------------------DNIIQGSESWLDKSTTVWSPPR 466

Query: 358 ITTSSNLGTYSPLLLKGS 411
           I ++SNL   SP L K S
Sbjct: 467 IISTSNLSVDSPFLPKES 484


>gb|PLY82751.1| hypothetical protein LSAT_2X73681 [Lactuca sativa]
          Length = 1049

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 53/138 (38%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
 Frame = +1

Query: 1   EYMDHLLDAKWNPASLHTVGSSENRLVVKELSAVPFHFDSDGQNIHDGSMKPFLRRCSSH 180
           ++M HL DAKWNP          N+L++KE S + FHFD+         +KPFLR CSSH
Sbjct: 411 KHMSHLSDAKWNP---------NNKLLLKESSPIQFHFDNH-------LIKPFLRSCSSH 454

Query: 181 KDVPAVVASTRGDDLFRSQADGFKKWLYMDDRFDFKKADHRIKGSEPWLN-AATVWSPLR 357
            D+  VV   + D+                        D+ I+GSE WL+ + TVWSP R
Sbjct: 455 LDLSPVVTKIQDDEF-----------------------DNIIQGSESWLDKSTTVWSPPR 491

Query: 358 ITTSSNLGTYSPLLLKGS 411
           I ++SNL   SP L K S
Sbjct: 492 IISTSNLSVDSPFLPKES 509


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