BLASTX nr result

ID: Chrysanthemum21_contig00022075 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00022075
         (617 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021996462.1| AMSH-like ubiquitin thioesterase 1 [Helianth...    58   2e-06

>ref|XP_021996462.1| AMSH-like ubiquitin thioesterase 1 [Helianthus annuus]
 ref|XP_021996463.1| AMSH-like ubiquitin thioesterase 1 [Helianthus annuus]
 gb|OTG03696.1| putative associated molecule with the SH3 domain of STAM 1
           [Helianthus annuus]
          Length = 516

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +2

Query: 5   MEEQTRQLSLNIPRATEESLSRHSILGPNGLF 100
           ++EQTRQLS+NIPRA EE+LSRHSILGPNGL+
Sbjct: 177 LDEQTRQLSVNIPRAKEETLSRHSILGPNGLY 208


Top