BLASTX nr result

ID: Chrysanthemum21_contig00022043 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00022043
         (351 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH91348.1| Aminoacyl-tRNA synthetase, class 1a, anticodon-bi...    56   1e-06
gb|KVH97029.1| Aminoacyl-tRNA synthetase, class I, conserved sit...    55   2e-06

>gb|KVH91348.1| Aminoacyl-tRNA synthetase, class 1a, anticodon-binding [Cynara
           cardunculus var. scolymus]
          Length = 643

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +2

Query: 23  SDVSLAIINRWSLRKEVETLIEDILEQSF-SELEEQPVLFFPSKEEYGDYQCDNVLSIWT 199
           S ++ A  + WSL+ ++  + E  L+ +   E E  P++   +K+E+GDYQC+N +S+W+
Sbjct: 53  STMAAATEDNWSLKDQIAKVFEVSLKVTVPDEPEVAPLIAACAKKEFGDYQCNNAMSLWS 112

Query: 200 QLRENPRESEQKYPHIKKPTNVGEEIRKHLEKRDDMIKEASIHDVGFV 343
           +++    E        + P  VG+ I K+L    +MI+  SI   GFV
Sbjct: 113 KIKGKGTE-------FRGPQPVGQAIMKNL-PTSEMIESTSIAGPGFV 152


>gb|KVH97029.1| Aminoacyl-tRNA synthetase, class I, conserved site-containing
           protein [Cynara cardunculus var. scolymus]
          Length = 233

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
 Frame = +2

Query: 2   MDMEVDASDVSLAII--NRWSLRKEVETLIEDILEQSF--SELEEQPVLFFPSKEEYGDY 169
           +D    A DV+  +   + W L+ ++  + E  L+ +    ELE  PV+   +K+E+GDY
Sbjct: 11  LDFADHADDVNCFVEQEDNWRLKDQIANVFEVSLKVTNVPDELEVAPVIAACAKKEFGDY 70

Query: 170 QCDNVLSIWTQLRENPRESEQKYPHIKKPTNVGEEIRKHLEKRDDMIKEASIHDVGFV 343
           QC+N + +W++++    E        + P  VG+ I K+L    DMI+  SI   GFV
Sbjct: 71  QCNNAMILWSKIKGKGTE-------FRGPQLVGQAIMKNL-PTSDMIESTSIVGPGFV 120


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