BLASTX nr result

ID: Chrysanthemum21_contig00021327 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00021327
         (472 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97856.1| AAA+ ATPase domain-containing protein [Cynara car...    57   3e-06
ref|XP_004504465.1| PREDICTED: putative pre-mRNA-splicing factor...    57   3e-06
gb|PNY04084.1| ATP-dependent RNA helicase dhx8-like protein [Tri...    55   6e-06
dbj|GAU30239.1| hypothetical protein TSUD_67910 [Trifolium subte...    55   9e-06

>gb|KVH97856.1| AAA+ ATPase domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 656

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/44 (70%), Positives = 32/44 (72%)
 Frame = -1

Query: 472 QPEEKTTENSDVPKKNVKTAEPADDAKSRIQAARERFLARKGNK 341
           Q EEKTT NSD PKK      P DD+ SRIQAARERFLARK NK
Sbjct: 617 QSEEKTTVNSDFPKK----VGPIDDSSSRIQAARERFLARKTNK 656


>ref|XP_004504465.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP1 [Cicer arietinum]
          Length = 697

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = -1

Query: 466 EEKTTENSDVPKKNVKTAEPADDAKSRIQAARERFLARKGNK 341
           EE      D+PK+NV+ A  ADD++SRIQAARERFLARKGNK
Sbjct: 656 EEPEKSIPDLPKQNVEVAVAADDSQSRIQAARERFLARKGNK 697


>gb|PNY04084.1| ATP-dependent RNA helicase dhx8-like protein [Trifolium pratense]
          Length = 276

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -1

Query: 466 EEKTTENSDVPKKNVKTAEPADDAKSRIQAARERFLARKGNK 341
           EE      D+PKKNV+ A   DD++SRIQAARERFLARK NK
Sbjct: 214 EESERSIPDLPKKNVEVAAATDDSESRIQAARERFLARKANK 255


>dbj|GAU30239.1| hypothetical protein TSUD_67910 [Trifolium subterraneum]
          Length = 792

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -1

Query: 466 EEKTTENSDVPKKNVKTAEPADDAKSRIQAARERFLARKGNK 341
           EE      D+PKKNV+ A   DD++SRIQAARERFLARK NK
Sbjct: 732 EESERNIPDLPKKNVEVAASVDDSESRIQAARERFLARKANK 773


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