BLASTX nr result

ID: Chrysanthemum21_contig00021280 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00021280
         (405 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH89396.1| CYC/TB1, R domain-containing protein [Cynara card...    67   2e-10
ref|XP_023732997.1| transcription factor TCP2-like [Lactuca sati...    62   2e-08
gb|KVH97387.1| CYC/TB1, R domain-containing protein [Cynara card...    62   2e-08

>gb|KVH89396.1| CYC/TB1, R domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 456

 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 41/85 (48%), Positives = 49/85 (57%), Gaps = 18/85 (21%)
 Frame = +2

Query: 68  SQPSSFTDLLAGVTG---VSHTSDLNPGVSTDSRMHWTTSPMDYF--------------- 193
           SQ SSFTDLL G      VS  ++ NP  S +SR+HWTT PMDYF               
Sbjct: 252 SQNSSFTDLLTGGISSATVSPNNNSNPAASPESRIHWTT-PMDYFFSRPPPSSSPQIIQM 310

Query: 194 QPFNVTANDSHSQHHHEFSFLQENY 268
             FN+TA ++H QHH  FSFLQEN+
Sbjct: 311 PQFNITAGENHPQHH--FSFLQENF 333


>ref|XP_023732997.1| transcription factor TCP2-like [Lactuca sativa]
 ref|XP_023732998.1| transcription factor TCP2-like [Lactuca sativa]
 gb|PLY74505.1| hypothetical protein LSAT_7X27781 [Lactuca sativa]
          Length = 454

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 38/78 (48%), Positives = 44/78 (56%), Gaps = 14/78 (17%)
 Frame = +2

Query: 77  SSFTDLLAGVTGVSHTSDLNPGVSTDSRMHWTTSPMDYF--------------QPFNVTA 214
           SSFTDLL G    S+T   NP  + +SRM WTT PMDYF                FN+ A
Sbjct: 260 SSFTDLLTGGIN-SNTVSPNPAATPESRMQWTT-PMDYFFNRPPQSSPQIIQMPQFNIAA 317

Query: 215 NDSHSQHHHEFSFLQENY 268
            D+H Q HH FSFLQEN+
Sbjct: 318 VDNHPQQHH-FSFLQENF 334


>gb|KVH97387.1| CYC/TB1, R domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 464

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 17/84 (20%)
 Frame = +2

Query: 68  SQPSSFTDLLAGVTGVSHTSDLNPGVSTDSRMHWTTSPMDYF--------------QPFN 205
           S+ SSFTDLL G    +     NP  S +SR HWTT PMDYF                FN
Sbjct: 261 SENSSFTDLLTGGINSTTVRRQNPTASPESRAHWTT-PMDYFFSRPPPPSSQLIQMPQFN 319

Query: 206 VTANDSHSQHH---HEFSFLQENY 268
           +TA D+H  H+   H FSFLQ+++
Sbjct: 320 ITAGDNHHHHNNQQHHFSFLQDSF 343


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