BLASTX nr result

ID: Chrysanthemum21_contig00021084 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00021084
         (641 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY62853.1| hypothetical protein LSAT_4X17220 [Lactuca sativa]      54   3e-06

>gb|PLY62853.1| hypothetical protein LSAT_4X17220 [Lactuca sativa]
          Length = 89

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 34/85 (40%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = -1

Query: 527 MAPLRSLKARHASWKXXXXXXXXXXXV-GPSSATSRGFTTLKPDQQRLNHDASSNNPGWY 351
           MA L S KA   SWK           + GPSSATSRG T ++P+  R  +D  S NP   
Sbjct: 1   MATLSSFKATRLSWKLFFLVLFFTILLVGPSSATSRGKTIMQPEHHRKKYDVGSKNPSLL 60

Query: 350 FSMXXXXXXXXXXXXXKRHNSVPNN 276
            SM             KRHNSV N+
Sbjct: 61  LSMLPKGKPVPPSGPSKRHNSVVNS 85


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