BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00020998
         (4543 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTF86030.1| putative ribonuclease H-like domain-containing pr...  1734   0.0  
gb|OTG07679.1| putative ribonuclease H-like domain-containing pr...  1678   0.0  
gb|OTF94656.1| putative ribonuclease H-like domain-containing pr...  1662   0.0  
dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. ru...  1361   0.0  
ref|XP_015084225.1| PREDICTED: uncharacterized protein LOC107027...  1353   0.0  
ref|XP_015084159.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...  1353   0.0  
gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinen...  1135   0.0  
gb|PRQ42045.1| putative RNA-directed DNA polymerase [Rosa chinen...  1110   0.0  
gb|PRQ42794.1| putative RNA-directed DNA polymerase [Rosa chinen...  1104   0.0  
dbj|GAU31450.1| hypothetical protein TSUD_72310 [Trifolium subte...  1101   0.0  
gb|PRQ17544.1| putative RNA-directed DNA polymerase [Rosa chinen...  1100   0.0  
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                     1092   0.0  
emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]  1089   0.0  
gb|PRQ41835.1| putative RNA-directed DNA polymerase [Rosa chinen...  1085   0.0  
gb|KYP39692.1| Retrovirus-related Pol polyprotein from transposo...  1085   0.0  
gb|PRQ55789.1| putative RNA-directed DNA polymerase [Rosa chinen...  1082   0.0  
gb|PNX92788.1| retrovirus-related Pol polyprotein from transposo...  1072   0.0  
emb|CAN60930.1| hypothetical protein VITISV_012765 [Vitis vinifera]  1066   0.0  
gb|PRQ37607.1| putative RNA-directed DNA polymerase [Rosa chinen...  1048   0.0  
gb|PRQ60115.1| putative RNA-directed DNA polymerase [Rosa chinen...  1037   0.0  

>gb|OTF86030.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1532

 Score = 1734 bits (4491), Expect = 0.0
 Identities = 849/1186 (71%), Positives = 979/1186 (82%), Gaps = 17/1186 (1%)
 Frame = +2

Query: 1037 QTPYMHSTTSHISSKNPQALPEPGYPKPNPRSVPQEMKVSHTATFNPFLEESFRKCKITH 1216
            +T  + S T+    +   ++P   Y +      P+E+++    +  PF+ ESF KC    
Sbjct: 353  ETDDVFSVTTGTGVERKVSIPH-SYLETTFTLTPEELEILKATSVVPFMIESFIKCNKHP 411

Query: 1217 KYVGRANMAQTWSEKQDKQWLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKR 1396
             + G ANMAQ   +++++ W+FDCGATDTMTY+ SDF + + P +++I TA+GE + VK 
Sbjct: 412  NFSGFANMAQNLIKEKEQSWIFDCGATDTMTYEKSDFVTSTKPTKSYIHTANGETMSVKN 471

Query: 1397 GGTIEISPTLKLSNCLYVPSLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRG 1576
            GGTIEISPTLK+SNCLYVPS SHKLLSISHVTKELNC+VLM PTFCILQDIRTG IIGRG
Sbjct: 472  GGTIEISPTLKISNCLYVPSFSHKLLSISHVTKELNCSVLMQPTFCILQDIRTGAIIGRG 531

Query: 1577 TERQGLYYVDEVTQQGTVMLAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLFPSNKPINC 1756
            TER GLYYVDEVTQ GTV+L+HGT  REAWLWHRRLGHPST YLH+LFPKLFPSN   +C
Sbjct: 532  TERGGLYYVDEVTQSGTVLLSHGTVEREAWLWHRRLGHPSTGYLHILFPKLFPSNCKTHC 591

Query: 1757 ETCVLAKSHRSTFKPNNTKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIY 1936
            ETC+LAKSHR TFKPNNT+V+ PFSLIHSD+WGPAPVIGGQ+ R+F++FVDDCTRMTW+Y
Sbjct: 592  ETCMLAKSHRKTFKPNNTRVDEPFSLIHSDVWGPAPVIGGQHLRFFVIFVDDCTRMTWVY 651

Query: 1937 FLRHKSEVFEKFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAY 2116
             L++KSEV +KFT FY MIQTQF+K+IQ+ RSDNG EFVN SMK FFQ KG+IHQT+C +
Sbjct: 652  LLKNKSEVLDKFTIFYTMIQTQFQKNIQVFRSDNGGEFVNTSMKHFFQTKGIIHQTTCPH 711

Query: 2117 TPEQNGVVERKNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQT 2296
            TPEQNGV ERKNRILLEITRALLI+SQVPK FWPEA+ TATYLINRLPT  LK KTPLQ 
Sbjct: 712  TPEQNGVAERKNRILLEITRALLIESQVPKVFWPEALVTATYLINRLPTQVLKLKTPLQV 771

Query: 2297 LSEFTKIPPTLTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNR 2476
            LSEF K P  LTL+PR+FGC+ FVHIPKT R KL PCAEKCVF+GYG+NQKGYRCYNP  
Sbjct: 772  LSEFKKPPSNLTLEPRIFGCTAFVHIPKTNRTKLDPCAEKCVFVGYGMNQKGYRCYNPTT 831

Query: 2477 RHMFTTMNCDFLETQYFYT-KHTGQGDKD-YDTLSWLKWMPSSEEVNHSTQDESPQPFTQ 2650
            RHMFTTMNCDFLET+Y+YT +H+GQG+++  DTLSWLK++P  E V+HST DE+P     
Sbjct: 832  RHMFTTMNCDFLETKYYYTSQHSGQGERECQDTLSWLKYVPYEEAVSHSTNDEAP---FS 888

Query: 2651 FEDPNISATQDAPPNLTSKVSNSQTQECDNSSDSVTNYEEHEHVETIELLEDESEQESPP 2830
             E+PNISA  +  PNL  +VSN  T  C  S    T   E+   ET+E +   ++ ++ P
Sbjct: 889  TENPNISAAPEVAPNLVPEVSN--THPC--SVHDSTEIRENTTNETVEQMSSSTQGDTSP 944

Query: 2831 VEPDR---------------YVLPPRSNRGVPPKRYSPEKEARNSRYPMANVAAGNLSPE 2965
            +E +                YVLPPRSNRGVPPKRYSPEK+++  RYP+AN+A GNLS E
Sbjct: 945  MEQNEHEQEDHSPQEDTQGGYVLPPRSNRGVPPKRYSPEKKSQGCRYPVANIAKGNLSEE 1004

Query: 2966 AKAFATSLCSEEIPTTVEQALESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWV 3145
            AKAF++SL SEEIPT  EQAL+S+ W++AME EM AL KN+TWE+C L  GKK VGCRWV
Sbjct: 1005 AKAFSSSLYSEEIPTNTEQALKSRHWKKAMEEEMKALTKNNTWEKCALLVGKKTVGCRWV 1064

Query: 3146 FTIKYKPDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQ 3325
            FTIKYKPDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKI+TIRVLFS+AANK WPL Q
Sbjct: 1065 FTIKYKPDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKINTIRVLFSVAANKGWPLHQ 1124

Query: 3326 FDVKNAFLHGELKEEVYMEVPPGLMKDPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRK 3505
            FDVKNAFLHGELKEEVYME P G   +   REVCRLKKSLYGLKQSPRAWFGRFTLAM+ 
Sbjct: 1125 FDVKNAFLHGELKEEVYMEAPHGFTVNFGEREVCRLKKSLYGLKQSPRAWFGRFTLAMKN 1184

Query: 3506 YGFKQSNSDHTLFLKKRNGLVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRL 3685
            YGFKQSNSDHTLFLK+RN L+TCLIIYVDDMIITG+DKEE++KLK NLF EFEMKDLGRL
Sbjct: 1185 YGFKQSNSDHTLFLKQRNNLITCLIIYVDDMIITGNDKEEITKLKKNLFTEFEMKDLGRL 1244

Query: 3686 KYFLGIEVMRSRQGIFICQKKYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKG 3865
            KYFLGIEV+RS+QGIF+CQKKY+LDLLAETG+IDCKP  TPM+ NQKLY+EE A+ AD+ 
Sbjct: 1245 KYFLGIEVLRSKQGIFMCQKKYVLDLLAETGLIDCKPADTPMIANQKLYIEETAEPADRE 1304

Query: 3866 KYQRIVGKLIYLSHTRPDIAYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLFKT 4045
            +YQRIVGKLIYLSHTRPDIAYAVGV+SQFMHQPQ  HM AV+RI+RYLKGT GHGVLFK 
Sbjct: 1305 RYQRIVGKLIYLSHTRPDIAYAVGVISQFMHQPQSAHMDAVFRILRYLKGTVGHGVLFKP 1364

Query: 4046 NGHLETHVYTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIAR 4225
            NGHL T +YTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIA+
Sbjct: 1365 NGHLGTQLYTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIAK 1424

Query: 4226 GLAEILWVRKLLTEIGYSPTQSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLE 4405
            G+ E+LWVR+LLTEIG+ P ++SKI  DNKAAIQISENPVQHDRTKHIEVDRHFIKEK E
Sbjct: 1425 GITEVLWVRRLLTEIGFPPQETSKITTDNKAAIQISENPVQHDRTKHIEVDRHFIKEKFE 1484

Query: 4406 AGIIELPFVRSENQLADILTKAVSEKIFNHCLGKLSIENPTTQLEG 4543
            A I+ L FV SE QLADILTKAV+E+I + CL KL+  NPT QLEG
Sbjct: 1485 AEIVSLSFVPSEEQLADILTKAVNERILHKCLDKLNFGNPTIQLEG 1530


>gb|OTG07679.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1162

 Score = 1678 bits (4345), Expect = 0.0
 Identities = 818/1108 (73%), Positives = 932/1108 (84%), Gaps = 18/1108 (1%)
 Frame = +2

Query: 1274 WLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYVP 1453
            W+FD GATDTMT++  D  S SNP++  I TA+  ++ VK GGTIEISPT+KLSNCLYVP
Sbjct: 11   WIFDSGATDTMTFERLDIQSMSNPQKTQIHTANNGMMQVKGGGTIEISPTMKLSNCLYVP 70

Query: 1454 SLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVDEVTQQGTVM 1633
            SLSHKLLSISH+TKELNCTVLMHP FC+LQDIRTGVIIGRGTERQGLYYVDEV QQGTVM
Sbjct: 71   SLSHKLLSISHITKELNCTVLMHPNFCLLQDIRTGVIIGRGTERQGLYYVDEVAQQGTVM 130

Query: 1634 LAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLFPSNKPINCETCVLAKSHRSTFKPNNTK 1813
            LAHGT  REAWLWHRRLGHPS  Y HLLFPKLFPS   I+CETC  AKSHR  FKP+NTK
Sbjct: 131  LAHGTENREAWLWHRRLGHPSVGYSHLLFPKLFPSKGKIDCETCFRAKSHRQPFKPSNTK 190

Query: 1814 VESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSEVFEKFTWFYAMI 1993
            V SPFSLIHSD+WGPAPV GGQ  RYF+LFVDDCTRMTW+YFL+ K+EVFEKF  FYAMI
Sbjct: 191  VASPFSLIHSDVWGPAPVTGGQGLRYFILFVDDCTRMTWVYFLKTKAEVFEKFVTFYAMI 250

Query: 1994 QTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGVVERKNRILLEIT 2173
            QTQF+  IQILRSDNG EFVN SM+QFF+ KG+IHQTSCA+TPEQNGV ERKNRI+LE+T
Sbjct: 251  QTQFQTQIQILRSDNGGEFVNTSMQQFFKTKGLIHQTSCAHTPEQNGVSERKNRIILEMT 310

Query: 2174 RALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKIPPTLTLKPRVFG 2353
            RALLI+SQVPKSFWPEAVAT+ YL+NRLPT ALKF+TPL  LS+ T IP  LTL+PR+FG
Sbjct: 311  RALLIESQVPKSFWPEAVATSVYLLNRLPTKALKFQTPLDCLSKSTNIPHPLTLEPRIFG 370

Query: 2354 CSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTMNCDFLETQYFYT 2533
            C+ FVHIPK  R+KLGPCAEKCVF+GYG++Q GYRCYNP  R MFTTMN DFLET+YFY 
Sbjct: 371  CTAFVHIPKVNRNKLGPCAEKCVFVGYGIDQMGYRCYNPKTRQMFTTMNVDFLETKYFYN 430

Query: 2534 KH-TGQGDKDY-DTLSWLKWMPSSEEVN-----HSTQDESPQPFTQFEDPNISATQDAPP 2692
               +GQG+ +  D LSWL  +PSSEEV      HST ++S    T  +    S T+++P 
Sbjct: 431  SQLSGQGENECTDPLSWLIQLPSSEEVTTAELTHSTPNQSSSNTTT-QSAEHSTTENSPS 489

Query: 2693 NLTSKVSNSQTQECDNSSDSVTNYEEHEHVETIELLEDESEQESPPVEP----------- 2839
            N+  +V N +  EC    +    + E   VE +E + +E E  +  VEP           
Sbjct: 490  NMIPEVRNIENSECTTYVEPDVEHVEPA-VEQVEPVAEEVEPVTEHVEPVTEHVEPAETT 548

Query: 2840 DRYVLPPRSNRGVPPKRYSPEKEARNSRYPMANVAAGNLSPEAKAFATSLCSEEIPTTVE 3019
             RY  PPR NRGVPPKRYSPEK A  SRYP+AN+A GNLS EAKAFA +LCSE++P+T +
Sbjct: 549  GRYSFPPRENRGVPPKRYSPEKVAPRSRYPVANIATGNLSKEAKAFAAALCSEQVPSTTQ 608

Query: 3020 QALESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFTIKYKPDGTIERYKARL 3199
            +AL+S+EW++AME EM+AL KN+TWE+CTLPPGKKPVGCRWVF++K++PDGTIERYKARL
Sbjct: 609  EALKSEEWKKAMETEMEALKKNNTWEKCTLPPGKKPVGCRWVFSVKHRPDGTIERYKARL 668

Query: 3200 VAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFDVKNAFLHGELKEEVYM 3379
            VAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANK WPL QFDVKNAFLHGEL EEVYM
Sbjct: 669  VAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKGWPLHQFDVKNAFLHGELNEEVYM 728

Query: 3380 EVPPGLMKDPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNSDHTLFLKKRN 3559
            + PPG  ++    E CRLKKSLYGLKQSPRAWFGRFTLAM+KYGFKQSNSDHTLFLK+R 
Sbjct: 729  DAPPGFNENFKAGETCRLKKSLYGLKQSPRAWFGRFTLAMKKYGFKQSNSDHTLFLKRRG 788

Query: 3560 GLVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFLGIEVMRSRQGIFIC 3739
             LVTCLIIYVDDMI+TG+D+EEM  L+  LF EFEMKDLGRLKYFLGIEV+RS QGIFIC
Sbjct: 789  SLVTCLIIYVDDMILTGNDEEEMLMLRDKLFSEFEMKDLGRLKYFLGIEVLRSNQGIFIC 848

Query: 3740 QKKYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQRIVGKLIYLSHTRPD 3919
            QKKYILDLLAETGMI+C+P  TPM+ N  L+ME+ A+LADK +YQR+VGKLIYLSHTRPD
Sbjct: 849  QKKYILDLLAETGMIECRPADTPMVVNHGLHMEDGAELADKERYQRMVGKLIYLSHTRPD 908

Query: 3920 IAYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLFKTNGHLETHVYTDADWAGDK 4099
            IAYAVGVVSQFMHQPQ +HM+AV RIIRYLKGT GHG+LFK+NGHLE   YTDADWAGDK
Sbjct: 909  IAYAVGVVSQFMHQPQASHMEAVLRIIRYLKGTAGHGILFKSNGHLEIQAYTDADWAGDK 968

Query: 4100 GNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAEILWVRKLLTEIGYS 4279
            G RRSTSGYFT+VGGNLVTWRSKKQKVVALSSAEAEFRG+ARGLAEILW+RKLLTEIG+ 
Sbjct: 969  GTRRSTSGYFTMVGGNLVTWRSKKQKVVALSSAEAEFRGVARGLAEILWIRKLLTEIGFL 1028

Query: 4280 PTQSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEAGIIELPFVRSENQLADI 4459
            PT ++KI+CDNKAAIQISENPVQHDRTKH+EVDRHFIKEKLE GIIELP+V+S++QLADI
Sbjct: 1029 PTTATKIMCDNKAAIQISENPVQHDRTKHVEVDRHFIKEKLEEGIIELPYVQSKDQLADI 1088

Query: 4460 LTKAVSEKIFNHCLGKLSIENPTTQLEG 4543
            LTKAV+  +F+ CL KLSI +PTTQLEG
Sbjct: 1089 LTKAVNGNVFSSCLSKLSIGDPTTQLEG 1116


>gb|OTF94656.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1139

 Score = 1662 bits (4303), Expect = 0.0
 Identities = 812/1122 (72%), Positives = 936/1122 (83%), Gaps = 25/1122 (2%)
 Frame = +2

Query: 1253 SEKQDKQWLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKL 1432
            +  ++  W+FD GATDTMT++  D  S + P+++ I TA+   + VK GG IEIS T+KL
Sbjct: 4    NHSKNSAWIFDSGATDTMTFEPLDIRSMTRPQKSQIHTANNGTMQVKGGGVIEISSTMKL 63

Query: 1433 SNCLYVPSLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVDEV 1612
            SNCLYVPSLSHKLLSISH+TKELNCTVLMHPTFC+LQDIRTGVIIGRGTERQGLYYVDEV
Sbjct: 64   SNCLYVPSLSHKLLSISHITKELNCTVLMHPTFCLLQDIRTGVIIGRGTERQGLYYVDEV 123

Query: 1613 TQQGTVMLAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLFPSNKPINCETCVLAKSHRST 1792
              QGTVMLAHGT  R+AWLWHRRLGHPS  Y HLLFPKLFPSN  I+CETC+ AKSHR  
Sbjct: 124  AHQGTVMLAHGTDNRDAWLWHRRLGHPSHGYSHLLFPKLFPSNGKIDCETCLRAKSHRHP 183

Query: 1793 FKPNNTKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSEVFEKF 1972
            FKP+NTKV SPFSLIHSD+WGPAPVIGGQ  RYF+LFVDDCTRMTW+YFL+ K+EVFEKF
Sbjct: 184  FKPSNTKVASPFSLIHSDVWGPAPVIGGQGLRYFILFVDDCTRMTWVYFLKTKAEVFEKF 243

Query: 1973 TWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGVVERKN 2152
              FYAMIQTQF+  IQILRSDNG EFVN SMKQFFQ KG+IHQTSCA+TPEQNGV ERKN
Sbjct: 244  VTFYAMIQTQFQTQIQILRSDNGGEFVNTSMKQFFQTKGLIHQTSCAHTPEQNGVSERKN 303

Query: 2153 RILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKIPPTLT 2332
            RI+LE+TRALLI+SQVPKSFWPEAVAT+ YL+NRLPT  LKFKTPL  LS+   IP  LT
Sbjct: 304  RIILEMTRALLIESQVPKSFWPEAVATSVYLLNRLPTKVLKFKTPLDCLSKSANIPHPLT 363

Query: 2333 LKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTMNCDFL 2512
            L+PR+FGC+ FVHIPK  R+KLGPCAEKCVF+GYG++Q GYRCYNP  R MFTTMN DFL
Sbjct: 364  LEPRIFGCTAFVHIPKVNRNKLGPCAEKCVFVGYGIDQIGYRCYNPKTRQMFTTMNVDFL 423

Query: 2513 ETQYFYTKH-TGQGDKD-YDTLSWLKWMPSSEEVN-----HSTQDESPQPFTQFEDPNIS 2671
            ET+YFY    +GQG+ +  D LSWL  +PSSEEV      HST ++S    T  +  + S
Sbjct: 424  ETKYFYEPQLSGQGENECIDPLSWLIQLPSSEEVTTTELPHSTPNQSSSNTTT-QSADHS 482

Query: 2672 ATQDAPPNLTSKVSNSQTQE----CD------NSSDSVTNYEEH--EHVETIELLEDESE 2815
             T+++P N+  +V N+++ E    CD      ++  + T   EH   +VE +E + +E E
Sbjct: 483  TTENSPSNMIPEVRNNESSEFTMPCDFETTGEHTDPTTTEPTEHGEPNVEHVEPVVEEVE 542

Query: 2816 QESPPVE------PDRYVLPPRSNRGVPPKRYSPEKEARNSRYPMANVAAGNLSPEAKAF 2977
              +  VE        RY LPPR NRGVPPKRYSPEK    SRYP+AN+A GNLS EAKA+
Sbjct: 543  PVTEHVELGAAETTGRYPLPPRENRGVPPKRYSPEKVTPRSRYPVANIATGNLSKEAKAY 602

Query: 2978 ATSLCSEEIPTTVEQALESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFTIK 3157
              +LCSE++P+T ++AL S+EW++AME EM+AL KN+TWE+CTLPPGKKPVGCRWVF++K
Sbjct: 603  TAALCSEQMPSTTQEALSSEEWKKAMETEMEALKKNNTWEKCTLPPGKKPVGCRWVFSVK 662

Query: 3158 YKPDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFDVK 3337
            ++PDGTIERYKARLVAKGYTQTYGIDYSETFSP+AKIDTIRVLFSIAANK WPL QFDVK
Sbjct: 663  HRPDGTIERYKARLVAKGYTQTYGIDYSETFSPIAKIDTIRVLFSIAANKGWPLHQFDVK 722

Query: 3338 NAFLHGELKEEVYMEVPPGLMKDPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRKYGFK 3517
            NAFLHGEL EEVYM+ PPG  ++    E CRLKKSLYGLKQSPRAWFGRFTLAM+KYGFK
Sbjct: 723  NAFLHGELNEEVYMDAPPGFNENFKAGETCRLKKSLYGLKQSPRAWFGRFTLAMKKYGFK 782

Query: 3518 QSNSDHTLFLKKRNGLVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFL 3697
            QSNSDHTLFLK+R  LVTCLIIYVDDMI+TG+D+EEMS L+  LF EFEMKDLGRLKYFL
Sbjct: 783  QSNSDHTLFLKRRGSLVTCLIIYVDDMILTGNDEEEMSMLRDKLFSEFEMKDLGRLKYFL 842

Query: 3698 GIEVMRSRQGIFICQKKYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQR 3877
            GIEV+RS+QGIFICQ+KY+LDLLAETGMI+C+P  TPM+ N  L+ME+ A LADK +YQR
Sbjct: 843  GIEVLRSKQGIFICQRKYVLDLLAETGMIECRPADTPMMVNHGLHMEDGADLADKERYQR 902

Query: 3878 IVGKLIYLSHTRPDIAYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLFKTNGHL 4057
            +VGKL+YLSHTRPDIAYAVGVVSQFMHQPQ +HM+AV RIIRYLKGT GHG+LFK+NGHL
Sbjct: 903  MVGKLVYLSHTRPDIAYAVGVVSQFMHQPQASHMEAVLRIIRYLKGTAGHGILFKSNGHL 962

Query: 4058 ETHVYTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAE 4237
            E   YTDADWAGDKG RRSTSGYFT+VGGNLVTWRSKKQKVVALSSAEAEFRG+ARGLAE
Sbjct: 963  EIQAYTDADWAGDKGTRRSTSGYFTMVGGNLVTWRSKKQKVVALSSAEAEFRGVARGLAE 1022

Query: 4238 ILWVRKLLTEIGYSPTQSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEAGII 4417
            +LWVRKLLTEIG+ PT ++KI+CDNKAAIQISENPVQHDRTKH+EVDRHFIKEKLE GII
Sbjct: 1023 VLWVRKLLTEIGFLPTTATKIMCDNKAAIQISENPVQHDRTKHVEVDRHFIKEKLEEGII 1082

Query: 4418 ELPFVRSENQLADILTKAVSEKIFNHCLGKLSIENPTTQLEG 4543
            ELP+V S++QLADILTKAV+   F+ CL KL I +PTTQLEG
Sbjct: 1083 ELPYVASKDQLADILTKAVNGNSFSSCLSKLGIGDPTTQLEG 1124


>dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. russellianum]
          Length = 1591

 Score = 1361 bits (3522), Expect = 0.0
 Identities = 674/1106 (60%), Positives = 833/1106 (75%), Gaps = 15/1106 (1%)
 Frame = +2

Query: 1271 QWLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYV 1450
            QW+FDCGATDTMT+D +D  + S P ++H++TASG+ + V+  G I I+P + L NCL V
Sbjct: 486  QWIFDCGATDTMTFDPTDLLTQSPPLKSHVETASGDTIPVQASGPITITPDITLQNCLLV 545

Query: 1451 PSLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVDEVTQQGTV 1630
            PSLS KLLSIS +TK L+C VLM+P+FC+LQDIRT  IIGRGTE  GLYYVD V Q G+ 
Sbjct: 546  PSLSTKLLSISQLTKALDCVVLMYPSFCLLQDIRTQAIIGRGTENGGLYYVDAVVQHGSS 605

Query: 1631 MLAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLFPSN-KPINCETCVLAKSHRSTFKPNN 1807
             LA GT  R+ WLWHRRLGHPS  YL  LFP LF     P+ C+TC+ AK  R+T++ NN
Sbjct: 606  NLATGTVTRQIWLWHRRLGHPSFSYLQKLFPTLFSRTLPPLTCDTCLRAKQPRATYRSNN 665

Query: 1808 TKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSEVFEKFTWFYA 1987
            T+V   FSLIHSD+WGP+P      F+YF++FVDDC+RMTW+Y LRHKSEV  KF  FY 
Sbjct: 666  TRVNKVFSLIHSDVWGPSPHSTPCGFKYFVIFVDDCSRMTWLYILRHKSEVATKFVEFYH 725

Query: 1988 MIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGVVERKNRILLE 2167
            MI TQ+  +IQILR+DNG E+   +++QFF++ G+IHQT+C  TPEQNGV ERKNR LLE
Sbjct: 726  MIHTQYSSTIQILRTDNGGEYFAGALQQFFRDNGIIHQTTCPDTPEQNGVAERKNRTLLE 785

Query: 2168 ITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKIPPTLTLKPRV 2347
            +TRAL+++S VP+  WPEAV+TATYL NRLPT  L  +TPL  L+  T IP  LTL P+V
Sbjct: 786  MTRALMLESSVPRFLWPEAVSTATYLSNRLPTVTLNHQTPLDVLASQTLIPSLLTLPPKV 845

Query: 2348 FGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTMNCDFLETQYF 2527
            FGC+VF+HI KT RDKL PCAEKCVF+GY   QKGYRCYNP  R +  T+NC FLET++F
Sbjct: 846  FGCTVFIHISKTHRDKLDPCAEKCVFVGYASTQKGYRCYNPRTRQIHVTLNCVFLETEFF 905

Query: 2528 YTKHTGQGDKDYDTLSWLKWMPS-SEEVNHSTQDESPQPFTQFEDPNISA----TQDAP- 2689
            +  H  +   +  T  +L W+P+ S  V   T+       T     N+ +    T D P 
Sbjct: 906  FGTHP-RSQGEIATDGYLDWLPNLSWSVADPTRQVVEPACTIAPSDNMDSIPVPTNDIPR 964

Query: 2690 PNLTSKVSNSQTQECDN-----SSDSVTNYEEHEHVETIELLEDESEQ---ESPPVEPDR 2845
             N+  +V+ S   +  +     S   V N    + + T   + D S +    +P V+   
Sbjct: 965  ENVLQQVNESIHDDTGSPVPFSSPPFVPNTTLDDSLTTSIAIPDPSSELDHTNPCVKEQG 1024

Query: 2846 YVLPPRSNRGVPPKRYSPEKEARNSRYPMANVAAGNLSPEAKAFATSLCSEEIPTTVEQA 3025
              LPPR  RGVPP RYSP K AR + YP++  +  NL   AKAF T +CSE+IP TV++A
Sbjct: 1025 RTLPPRKTRGVPPDRYSPTKIARATLYPVST-SRKNLGHAAKAFFTQICSEKIPRTVDEA 1083

Query: 3026 LESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFTIKYKPDGTIERYKARLVA 3205
                 WR+AM +EMDALNKN+TWERC LPPGK+ VGCRWVFT+KYK DGTIER+KARLVA
Sbjct: 1084 CSQSNWRDAMIMEMDALNKNNTWERCQLPPGKRTVGCRWVFTVKYKADGTIERHKARLVA 1143

Query: 3206 KGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFDVKNAFLHGELKEEVYMEV 3385
            KGYTQTYG+DYSETFSPVA+IDTIRVLF+IAA + WPL QFDVKNAFLHG LKEEV+M+ 
Sbjct: 1144 KGYTQTYGVDYSETFSPVARIDTIRVLFAIAATENWPLHQFDVKNAFLHGTLKEEVFMDP 1203

Query: 3386 PPGLMKDPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNSDHTLFLKKRNGL 3565
            PPG  K+    +VC+L ++LYGLKQSPRAWFGRFT AM+K G++QSN+DHTLF+K++  L
Sbjct: 1204 PPGFSKEFLPGQVCKLNRALYGLKQSPRAWFGRFTQAMKKDGYRQSNADHTLFIKRQGSL 1263

Query: 3566 VTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFLGIEVMRSRQGIFICQK 3745
            VTCLIIYVDDMIITG+D  E+S+L+  LF +FEMKDLG LKYFLGIEV+RS +GI+I Q+
Sbjct: 1264 VTCLIIYVDDMIITGNDANEISRLRDYLFTQFEMKDLGGLKYFLGIEVLRSAEGIYISQR 1323

Query: 3746 KYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQRIVGKLIYLSHTRPDIA 3925
            KYILDLL E G++D KP  TPM+ N KL + + A  AD+ +YQR+VGKLIYLSHTRPDIA
Sbjct: 1324 KYILDLLTEVGLLDAKPADTPMVQNHKLDIVQGAASADREQYQRLVGKLIYLSHTRPDIA 1383

Query: 3926 YAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLFKTNGHLETHVYTDADWAGDKGN 4105
            YAVGVVSQFMH PQ  H++AV+RI+RYLKGTPG G+LFK NGHL    YTDADWAG + +
Sbjct: 1384 YAVGVVSQFMHSPQKHHLEAVFRIMRYLKGTPGRGLLFKNNGHLNIEAYTDADWAGSQID 1443

Query: 4106 RRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAEILWVRKLLTEIGYSPT 4285
            RRSTSGYFTLVGGN+VTWRSKKQKVVALSSAEAE+RGI +G++E+LW+RKLL E+G+  T
Sbjct: 1444 RRSTSGYFTLVGGNVVTWRSKKQKVVALSSAEAEYRGIVKGVSEVLWIRKLLQELGFPVT 1503

Query: 4286 QSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEAGIIELPFVRSENQLADILT 4465
              + ++CDNKA+I ISENPVQHDRTKH+E+DRHF+KEK+E GII LP VRSE+QLADILT
Sbjct: 1504 DPTCLMCDNKASISISENPVQHDRTKHVEIDRHFVKEKIEDGIIALPHVRSEDQLADILT 1563

Query: 4466 KAVSEKIFNHCLGKLSIENPTTQLEG 4543
            KAV+ +IF   L KL+I +PT QLEG
Sbjct: 1564 KAVNGRIFEFILRKLNIVDPTIQLEG 1589


>ref|XP_015084225.1| PREDICTED: uncharacterized protein LOC107027628 [Solanum pennellii]
          Length = 2107

 Score = 1353 bits (3501), Expect = 0.0
 Identities = 672/1111 (60%), Positives = 827/1111 (74%), Gaps = 10/1111 (0%)
 Frame = +2

Query: 1241 AQTWSEKQDKQ----------WLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDV 1390
            AQ + + ++KQ          W+FDCGATDTM+YD +DF S ++  R  IQTA+GE + +
Sbjct: 428  AQLYKKPKEKQSVGLMCNKSNWIFDCGATDTMSYDPTDFLSSTSTTRTKIQTANGEFIPI 487

Query: 1391 KRGGTIEISPTLKLSNCLYVPSLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIG 1570
             + G ++I+  + L NCL +PSL+HKLLS+S +TKELNCT+LM  + CI+QD +TG IIG
Sbjct: 488  TQAGDVDITSEIHLKNCLLIPSLTHKLLSVSQLTKELNCTILMTSSDCIVQDAQTGRIIG 547

Query: 1571 RGTERQGLYYVDEVTQQGTVMLAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLFPSNKPI 1750
            RG ER GLYYV+EVTQQG  +LA G+   + W+WHRRLGHPS  YL  LFP     +  +
Sbjct: 548  RGIERGGLYYVNEVTQQGNALLAQGSPEYQIWMWHRRLGHPSLSYLKRLFPSFKDIDFVL 607

Query: 1751 NCETCVLAKSHRSTFKPNNTKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTW 1930
            +CE CVLAKSH+ ++ P++T V  PF+LIHSD+WGPAP      + YF+LFVDDCTRM+W
Sbjct: 608  DCEACVLAKSHKHSYSPSSTHVSKPFTLIHSDVWGPAPEFAFYKYSYFVLFVDDCTRMSW 667

Query: 1931 IYFLRHKSEVFEKFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSC 2110
            +YFL++KSEV++ F  FY MI TQF    QILRSDNG E++N  MKQF  + G+IHQT+C
Sbjct: 668  VYFLKNKSEVYDVFINFYNMICTQFAAQPQILRSDNGGEYINLDMKQFISDHGLIHQTTC 727

Query: 2111 AYTPEQNGVVERKNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPL 2290
              TP+QNG+ ERKNR LLEITRA++++S VP  FWPEA+ATATYL NRLPT  L ++TPL
Sbjct: 728  PDTPQQNGIAERKNRTLLEITRAIMLESHVPVHFWPEAIATATYLTNRLPTKPLAYQTPL 787

Query: 2291 QTLSEFTKIPPTLTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNP 2470
             TLS    IP   +L PRVFGC V+VH+PK  R+KL P A KCVF+GYGV QKGYRCY+P
Sbjct: 788  DTLSSHVSIPSYHSLPPRVFGCVVYVHLPKRIRNKLEPRAIKCVFIGYGVTQKGYRCYDP 847

Query: 2471 NRRHMFTTMNCDFLETQYFYTKHTGQGDKDYDTLSWLKWMPSSEEVNHSTQDESPQPFTQ 2650
             +  ++T+++C+F E  Y+YT+   QG+   D LSWL + P   +++  TQ       + 
Sbjct: 848  IQNKIYTSLDCEFFEHSYYYTQPGPQGETTNDDLSWLIY-PEMMDLDPPTQ------VSN 900

Query: 2651 FEDPNISATQDAPPNLTSKVSNSQTQECDNSSDSVTNYEEHEHVETIELLEDESEQESPP 2830
              D N   +  AP   T+ ++ ++  E    S SV    E   V T  +  D  +     
Sbjct: 901  TTDVNSETSVSAPSPQTTPMTTTEHPE----STSVEVNSELCTVPTDSVSSDNCQ----- 951

Query: 2831 VEPDRYVLPPRSNRGVPPKRYSPEKEARNSRYPMANVAAGNLSPEAKAFATSLCSEEIPT 3010
               +RY LP RS RGVPPKRY PE E + SRYP+  ++  NLS  A AF TSL S  IP 
Sbjct: 952  ---NRYELPHRSTRGVPPKRYDPEYEDQRSRYPIERISNENLSNTAVAFTTSLYSTNIPR 1008

Query: 3011 TVEQALESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFTIKYKPDGTIERYK 3190
            TVE+A E ++WR+AME E  AL KN TWE+C LP GKK VGCRWVF+IK++ DGTIERYK
Sbjct: 1009 TVEEAFEDEKWRQAMENEYVALEKNHTWEKCILPKGKKKVGCRWVFSIKHRADGTIERYK 1068

Query: 3191 ARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFDVKNAFLHGELKEE 3370
            ARLVAKGYTQT+GIDYSETFSPVAKIDTIRVLFS+AANK+WPL QFDVKNAFLHG ++EE
Sbjct: 1069 ARLVAKGYTQTFGIDYSETFSPVAKIDTIRVLFSVAANKDWPLYQFDVKNAFLHGSIEEE 1128

Query: 3371 VYMEVPPGLMKDPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNSDHTLFLK 3550
            VYME PPG   D    E C+LKK+LYGLKQSPRAWFGRFT AM+K+G++QSNSDHTLF+K
Sbjct: 1129 VYMEPPPGYSHDFKDGEGCKLKKALYGLKQSPRAWFGRFTKAMKKFGYRQSNSDHTLFIK 1188

Query: 3551 KRNGLVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFLGIEVMRSRQGI 3730
              N  +TCLIIYVDDMIITG+D+EE+  LK  LF+EFEMKDLG LKYFLGIEV+RS QGI
Sbjct: 1189 GANQKITCLIIYVDDMIITGNDEEEIVTLKGKLFQEFEMKDLGNLKYFLGIEVLRSTQGI 1248

Query: 3731 FICQKKYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQRIVGKLIYLSHT 3910
            FI Q+KYILDLL ETGM+  KP  TP++ N  L + E AK  DK +YQ+IVGKLIYL+HT
Sbjct: 1249 FIHQRKYILDLLTETGMLGSKPADTPIIANHGLQVIEGAKATDKEQYQKIVGKLIYLAHT 1308

Query: 3911 RPDIAYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLFKTNGHLETHVYTDADWA 4090
            RPDIAYAVG+VS+FMH PQ+ HM AV RI+RYLKGT   G+ F  N  L+   YTDADWA
Sbjct: 1309 RPDIAYAVGIVSRFMHLPQIHHMTAVMRILRYLKGTSSTGIYFGKNDSLDITAYTDADWA 1368

Query: 4091 GDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAEILWVRKLLTEI 4270
            GD+  R+STSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGI +G+ EILW+RKLL E+
Sbjct: 1369 GDRDERKSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIVKGITEILWIRKLLNEL 1428

Query: 4271 GYSPTQSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEAGIIELPFVRSENQL 4450
            G+    + K+ CDNKAAI IS NPVQHDRTKH+EVDRHFIK+KLE  +I+LPFVRS++QL
Sbjct: 1429 GFPQKTACKLFCDNKAAISISGNPVQHDRTKHVEVDRHFIKDKLEDKVIKLPFVRSKDQL 1488

Query: 4451 ADILTKAVSEKIFNHCLGKLSIENPTTQLEG 4543
            ADILTKAVS + F++ L KLSI NP+ QLEG
Sbjct: 1489 ADILTKAVSTEAFSNVLRKLSIGNPSAQLEG 1519


>ref|XP_015084159.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107027526
            [Solanum pennellii]
          Length = 2329

 Score = 1353 bits (3501), Expect = 0.0
 Identities = 670/1090 (61%), Positives = 819/1090 (75%)
 Frame = +2

Query: 1274 WLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYVP 1453
            W+FDCGATDTM+YD SDF S ++  R  IQTA+GE + + + G ++I+  + L NCL +P
Sbjct: 445  WIFDCGATDTMSYDPSDFLSSTSTTRTKIQTANGEFIPITQAGDVDITSEIHLKNCLLIP 504

Query: 1454 SLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVDEVTQQGTVM 1633
            SL+HKLLS+S +TKELNCT+LM  + CI+QD +TG IIGRG ER GLYYV+EVTQQG  +
Sbjct: 505  SLTHKLLSVSQLTKELNCTILMTSSDCIVQDAQTGRIIGRGIERGGLYYVNEVTQQGNAL 564

Query: 1634 LAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLFPSNKPINCETCVLAKSHRSTFKPNNTK 1813
            LA G+   + W+WHRRLGHPS  YL  LFP     +  ++CE CVLAKSH+ ++ P++T 
Sbjct: 565  LAQGSPEYQIWMWHRRLGHPSLSYLKRLFPSFKDIDFVLDCEACVLAKSHKHSYSPSSTH 624

Query: 1814 VESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSEVFEKFTWFYAMI 1993
            V  PF+LIHSD+WGPAP      + YF+LFVDDCTRM+W+YFL++KSEV++ F  FY MI
Sbjct: 625  VSKPFTLIHSDVWGPAPEFAFYKYSYFVLFVDDCTRMSWVYFLKNKSEVYDVFINFYNMI 684

Query: 1994 QTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGVVERKNRILLEIT 2173
             TQF    QILRSDNG E++N  MKQF  + G+IHQT+C  TP+QNG+ ERKNR LLEIT
Sbjct: 685  CTQFAAQPQILRSDNGGEYINLDMKQFISDHGLIHQTTCPDTPQQNGIAERKNRTLLEIT 744

Query: 2174 RALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKIPPTLTLKPRVFG 2353
            RA++++S VP  FWPEA+ATATYL NRLPT  L ++TPL TLS    IP   +L PRVFG
Sbjct: 745  RAIMLESHVPVHFWPEAIATATYLTNRLPTKPLAYQTPLDTLSSHVSIPSYHSLPPRVFG 804

Query: 2354 CSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTMNCDFLETQYFYT 2533
            C V+VH+PK  R+KL P A KCVF+GYGV QKGYRCY+P +  ++T+++C+F E  Y+YT
Sbjct: 805  CVVYVHLPKRIRNKLEPRAIKCVFIGYGVTQKGYRCYDPIQNKIYTSLDCEFFEHSYYYT 864

Query: 2534 KHTGQGDKDYDTLSWLKWMPSSEEVNHSTQDESPQPFTQFEDPNISATQDAPPNLTSKVS 2713
            +   QG+   D LSWL + P   +++  TQ       +   D N   +  AP   T+ ++
Sbjct: 865  QPGPQGETTNDDLSWLIY-PEMMDLDPPTQ------VSNTTDVNSETSVSAPSPQTTPMT 917

Query: 2714 NSQTQECDNSSDSVTNYEEHEHVETIELLEDESEQESPPVEPDRYVLPPRSNRGVPPKRY 2893
             ++  E    S SV    E   V T  +  D  +        +RY LP RS RGVPPKRY
Sbjct: 918  TTEHPE----STSVEVNSELCTVPTDSVSSDNCQ--------NRYELPHRSTRGVPPKRY 965

Query: 2894 SPEKEARNSRYPMANVAAGNLSPEAKAFATSLCSEEIPTTVEQALESKEWREAMEVEMDA 3073
             PE E + SRYP+  ++  NLS  A AF TSL S  IP TVE+A E ++WR+AME E  A
Sbjct: 966  DPEYEDQRSRYPIERISNENLSNTAVAFTTSLYSTNIPRTVEEAFEDEKWRQAMENEYVA 1025

Query: 3074 LNKNDTWERCTLPPGKKPVGCRWVFTIKYKPDGTIERYKARLVAKGYTQTYGIDYSETFS 3253
            L KN TWE+C LP GKK VGCRWVF+IK++ DGTIERYKARLVAKGYTQT+GIDYSETFS
Sbjct: 1026 LEKNHTWEKCILPKGKKKVGCRWVFSIKHRADGTIERYKARLVAKGYTQTFGIDYSETFS 1085

Query: 3254 PVAKIDTIRVLFSIAANKEWPLLQFDVKNAFLHGELKEEVYMEVPPGLMKDPNTREVCRL 3433
            PVAKIDTIRVLFS+AANK+WPL QFDVKNAFLHG ++EEVYME PPG   D    E C+L
Sbjct: 1086 PVAKIDTIRVLFSVAANKDWPLYQFDVKNAFLHGSIEEEVYMEPPPGYSHDFKDGEGCKL 1145

Query: 3434 KKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNSDHTLFLKKRNGLVTCLIIYVDDMIITGD 3613
            KK+LYGLKQSPRAWFGRFT AM+K+G++QSNSDHTLF+K  N  +TCLIIYVDDMIITG+
Sbjct: 1146 KKALYGLKQSPRAWFGRFTKAMKKFGYRQSNSDHTLFIKGANQKITCLIIYVDDMIITGN 1205

Query: 3614 DKEEMSKLKVNLFREFEMKDLGRLKYFLGIEVMRSRQGIFICQKKYILDLLAETGMIDCK 3793
            D+EE+  LK  LF+EFEMKDLG LKYFLGIEV+RS QGIFI Q+KYILDLL ETGM+  K
Sbjct: 1206 DEEEIVTLKGKLFQEFEMKDLGNLKYFLGIEVLRSTQGIFIHQRKYILDLLTETGMLGSK 1265

Query: 3794 PMGTPMLPNQKLYMEENAKLADKGKYQRIVGKLIYLSHTRPDIAYAVGVVSQFMHQPQVT 3973
            P  TP++ N  L + E AK  DK +YQ+IVGKLIYL+HTRPDIAYAVGVVS+FMH PQ+ 
Sbjct: 1266 PADTPIVANHGLQVIEGAKATDKEQYQKIVGKLIYLAHTRPDIAYAVGVVSRFMHLPQIH 1325

Query: 3974 HMKAVWRIIRYLKGTPGHGVLFKTNGHLETHVYTDADWAGDKGNRRSTSGYFTLVGGNLV 4153
            HM AV RI+RYLKGT   G+ F  N  L+   YTDADWAGD+  R+STSGYFTLVGGNLV
Sbjct: 1326 HMTAVMRILRYLKGTSSTGIYFGKNDSLDIIAYTDADWAGDRDERKSTSGYFTLVGGNLV 1385

Query: 4154 TWRSKKQKVVALSSAEAEFRGIARGLAEILWVRKLLTEIGYSPTQSSKILCDNKAAIQIS 4333
            TWRSKKQKVVALSSAEAEFRGI +G+ EILW+RKLL E+G+    + K+ CDNKAAI IS
Sbjct: 1386 TWRSKKQKVVALSSAEAEFRGIVKGITEILWIRKLLNELGFPQKTACKLFCDNKAAISIS 1445

Query: 4334 ENPVQHDRTKHIEVDRHFIKEKLEAGIIELPFVRSENQLADILTKAVSEKIFNHCLGKLS 4513
             NPVQHDRTKH+EVDRHFIK+KLE  +I+LPFVRS++QLADILTKAVS + F++ L KLS
Sbjct: 1446 GNPVQHDRTKHVEVDRHFIKDKLEDKVIKLPFVRSKDQLADILTKAVSTEAFSNVLRKLS 1505

Query: 4514 IENPTTQLEG 4543
            I NP+ QLEG
Sbjct: 1506 IGNPSAQLEG 1515


>gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1350

 Score = 1135 bits (2937), Expect = 0.0
 Identities = 590/1194 (49%), Positives = 782/1194 (65%), Gaps = 44/1194 (3%)
 Frame = +2

Query: 1073 SSKNPQALPEPGYPKPNPRSVPQEMKVSHTATFNP-----------FLEESFRKCKITHK 1219
            S+ NP++    G P+ + +    E+  S T+   P           F+  S   C +   
Sbjct: 169  SNNNPKSYRSKGKPQVSLQIASPELSSSTTSDEPPHSVHSGNSTFAFMTTSGTPCSLLS- 227

Query: 1220 YVGRANMAQTWSEKQDKQWLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRG 1399
                +N A  W +     W+ D GATD MT + S+    +  RR+ +  A+G+   +   
Sbjct: 228  ----SNSAFNWKD----MWIIDSGATDHMTNNPSNIHHLTPVRRSGVTNANGDSYPITGA 279

Query: 1400 GTIEISPTLKLSNCLYVPSLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGT 1579
            G++ ++ ++ L   L VPSLSH LLS+  +TK+  C V+++P  CI QDI TG IIGRG 
Sbjct: 280  GSVTLTKSITLDTVLLVPSLSHNLLSVKQITKQFYCCVILYPWCCIFQDILTGEIIGRGI 339

Query: 1580 ERQGLYYVDEVTQQGTVMLAH--------GTTRREAWLWHRRLGHPSTRYLHLLFPKLFP 1735
            E+ GLYY+ E+T  G   ++          T   + WLWH+RLGHPS  YL  LFP LF 
Sbjct: 340  EKGGLYYM-EMTTAGNRRISEVHHIQKKPSTDEEQIWLWHKRLGHPSFGYLQTLFPLLFQ 398

Query: 1736 SNKP--INCETCVLAKSHRSTFKPNNTKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVD 1909
             NKP    C TC+L KSHR TF  ++ K  SPF L+HSD+WGP P       ++F+LFVD
Sbjct: 399  HNKPSDFKCNTCILGKSHRVTFPLSSNKSISPFDLVHSDVWGPCPATPS-GMKWFVLFVD 457

Query: 1910 DCTRMTWIYFLRHKSEVFEKFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKG 2089
            DCTRM+WIY LR+KS+VF  F  F+AMIQTQF+  I++LRSD G E+VN+   Q+    G
Sbjct: 458  DCTRMSWIYLLRNKSDVFPVFQTFHAMIQTQFQTPIKVLRSDKGGEYVNHPFHQYLATHG 517

Query: 2090 MIHQTSCAYTPEQNGVVERKNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHA 2269
            ++HQT+C  TP+QNGV ERKNR +LE+ R++LI + +P+SFW +A+ T  YLINRLPT A
Sbjct: 518  IVHQTTCPQTPQQNGVAERKNRHILEVARSMLIGAHMPESFWGDAILTTAYLINRLPTQA 577

Query: 2270 LKF---------KTPLQTLSEFTKIPPTLTLKPRVFGCSVFVHIPKTERDKLGPCAEKCV 2422
            L+          +TP+Q L+    +PPT  L P++FGC  +VHI + +R KL  CAEKC+
Sbjct: 578  LQSTAKETSPPPQTPIQALASHLPLPPTHALDPKIFGCVAYVHIHRNQRTKLDACAEKCI 637

Query: 2423 FLGYGVNQKGYRCYNPNRRHMFTTMNCDFLETQ-YFYTKHTGQGDKDYDT--------LS 2575
            F+GY   QKGYRCY+P  +  + +M+  F E   +F  K T QG+ D +           
Sbjct: 638  FIGYASTQKGYRCYSPTTKRTYVSMDVTFHEHDLHFSPKPTIQGENDIEEERSSGDCLCP 697

Query: 2576 WLKWMPSSEEVNHSTQDESPQPFTQFEDPN-ISATQDAPPNLTSKVSNSQTQECDNSSDS 2752
             L+ M   E  N    ++ P      E  N +   + A  +++S  +   T         
Sbjct: 698  PLEPMDIQEHGNTERSNQLPTSEMAAEHGNQLPTPESAVRDISSPSTTPSTPMLPEDDPE 757

Query: 2753 VTN---YEEHEHVETIELLEDESEQESPPVEPDRYVLPPRSNRGVPPKRYSPEKEARNSR 2923
            V N   +E H++V ++   E ES           + LP R NRG P  +Y P+ +A+ ++
Sbjct: 758  VINNPVFECHDNVNSMPNTEIESSDIIGV-----HKLPFRKNRGQPKVQYEPDPKAK-AK 811

Query: 2924 YPMAN-VAAGNLSPEAKAFATSLCSEEIPTTVEQALESKEWREAMEVEMDALNKNDTWER 3100
            YP++N +++  LS    +F   L +  IP  V+ AL + +W +AME EM+AL KN TWE 
Sbjct: 812  YPISNYMSSHRLSKSYASFVFHLSAIIIPNKVQDALSNPKWTKAMEDEMEALQKNHTWEL 871

Query: 3101 CTLPPGKKPVGCRWVFTIKYKPDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKIDTIR 3280
               P GK+ VGCRW++T+KY  DGT++RYKARLVAKGYTQTYGIDY ETF+PVAK++T+R
Sbjct: 872  VPKPAGKRAVGCRWIYTLKYAADGTLDRYKARLVAKGYTQTYGIDYQETFAPVAKMNTVR 931

Query: 3281 VLFSIAANKEWPLLQFDVKNAFLHGELKEEVYMEVPPGLMKDPNTREVCRLKKSLYGLKQ 3460
            VL S+AAN +WPL QFDVKNAFLHG+LKEEVYM++PPG         VC+LKKSLYGLKQ
Sbjct: 932  VLLSLAANLDWPLKQFDVKNAFLHGDLKEEVYMDLPPGYSLPSQAGMVCKLKKSLYGLKQ 991

Query: 3461 SPRAWFGRFTLAMRKYGFKQSNSDHTLFLKKRNGLVTCLIIYVDDMIITGDDKEEMSKLK 3640
            SPRAWFGRF+ +M+++G+KQSNSDHTLFLK R   +T LIIYVDDMI+TG+D EE+ KL+
Sbjct: 992  SPRAWFGRFSQSMKQFGYKQSNSDHTLFLKHRKDKLTALIIYVDDMIVTGNDPEEVKKLE 1051

Query: 3641 VNLFREFEMKDLGRLKYFLGIEVMRSRQGIFICQKKYILDLLAETGMIDCKPMGTPMLPN 3820
             +L   FEMKDLG LKYFLGIEV RS++GI + Q+KY++DLL ETG++ C+P  TPM  N
Sbjct: 1052 AHLSSVFEMKDLGGLKYFLGIEVARSKEGIALSQRKYVVDLLIETGLLACRPADTPMEQN 1111

Query: 3821 QKLYMEENAKLADKGKYQRIVGKLIYLSHTRPDIAYAVGVVSQFMHQPQVTHMKAVWRII 4000
             KL    +    +K +YQR+VGKLIYLSHTRPDIAYAV VVSQFMH P   HM+AV RI+
Sbjct: 1112 HKLAEYPDQVPTNKERYQRLVGKLIYLSHTRPDIAYAVSVVSQFMHAPSEDHMEAVHRIL 1171

Query: 4001 RYLKGTPGHGVLFKTNGHLETHVYTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKV 4180
            RYLK  PG G++F  N H +   YTDADWAG   +RRSTSGYFT VGGNLVTWRSKKQKV
Sbjct: 1172 RYLKTNPGKGIMFSKNNHTDIAGYTDADWAGSITDRRSTSGYFTFVGGNLVTWRSKKQKV 1231

Query: 4181 VALSSAEAEFRGIARGLAEILWVRKLLTEIGYSPTQSSKILCDNKAAIQISENPVQHDRT 4360
            VA SSAEAE+RG+A G+ E+LW+R L+ ++G+ P  +  + CDNKAAI I+ NPVQHDRT
Sbjct: 1232 VARSSAEAEYRGMAHGVCEMLWLRHLMKDLGFKPKYAMNLYCDNKAAIDIAHNPVQHDRT 1291

Query: 4361 KHIEVDRHFIKEKLEAGIIELPFVRSENQLADILTKAVSEKIFNHCLGKLSIEN 4522
            KH+EVDRHFIKEKLE+  I +P VR+E+QLADILTKAVS K+F+  L KL + +
Sbjct: 1292 KHVEVDRHFIKEKLESETINMPHVRTEDQLADILTKAVSGKVFHSSLDKLGMRD 1345


>gb|PRQ42045.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1226

 Score = 1110 bits (2870), Expect = 0.0
 Identities = 573/1113 (51%), Positives = 747/1113 (67%), Gaps = 32/1113 (2%)
 Frame = +2

Query: 1274 WLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYVP 1453
            W+ D GA+D MTYD + F+  S+P  +++  A+GE   V   G+I I+PTL+L N LYVP
Sbjct: 120  WIIDSGASDHMTYDKTYFTELSSPPVSYVTNANGEAFPVLGTGSIRITPTLQLHNVLYVP 179

Query: 1454 SLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVDEV------- 1612
             LSH L+S+  +  E  C++  +P + I QD+ T  +IGRG  R  L+++D+        
Sbjct: 180  DLSHHLISVPQLNTESQCSITFYPMYVIFQDLLTRELIGRGYLRGRLFHLDQTYAGEKPG 239

Query: 1613 TQQGTVMLAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLF--PSNKPINCETCVLAKSHR 1786
             Q  T + ++     E WLWHRRLGHPS   +    P LF   +   + CETCVLAKSHR
Sbjct: 240  AQSRTALTSNSDQLSEIWLWHRRLGHPSFSLMKKSMPTLFIGVNESVLRCETCVLAKSHR 299

Query: 1787 STFKPN-NTKVESPFSLIHSDIWGPA--PVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSE 1957
            +T+ P+ + K   PF LIHSD+WGP+  P + G   RYF+LF+DDCTR++W+  LR K E
Sbjct: 300  ATYSPSFSNKSVIPFELIHSDVWGPSREPTVSGM--RYFVLFIDDCTRLSWVALLRTKDE 357

Query: 1958 VFEKFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGV 2137
            VF  F  F  ++QTQ+  +I++LRSDNG E+VN+  K FFQ  G++HQT+C  TPEQNGV
Sbjct: 358  VFPAFQTFRTLVQTQYNSTIRVLRSDNGGEYVNHFFKDFFQTHGIVHQTTCPQTPEQNGV 417

Query: 2138 VERKNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKI 2317
             ERKNR LL++ RA+L  + +PK  W +AV  +++LINRLP+  L+ K P + L+    +
Sbjct: 418  SERKNRHLLDMARAILFSAHMPKYLWGDAVQASSHLINRLPSSVLQGKIPFEVLASHVSL 477

Query: 2318 PPTLTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTM 2497
            P    L  RVFGC  FVH+PK +R KL   A KCVF+GYG  QKGY+CY+P  R  + TM
Sbjct: 478  PSFHNLPARVFGCVAFVHVPKNQRSKLDARAIKCVFVGYGGYQKGYKCYHPPTRKYYVTM 537

Query: 2498 NCDFLETQ-YFYTKHTG-QGDKDY---------DTLSWLKWMPSSEEVNHSTQDESPQPF 2644
            +  F E   YF +  T  QG+  Y         + L   + +  + +++ S  D  P P 
Sbjct: 538  DVTFFEDMSYFSSSDTVLQGENSYFEDLYHFEGEELERREEVTQAGDISASLVD-IPYP- 595

Query: 2645 TQFEDPNISATQDAPPNLTSKVSNSQTQECDNSSDSVTNYEEHEHVETIELLEDESEQES 2824
                  N    +   P++ + VS ++ +  D +  SV        +  IE   D S +  
Sbjct: 596  -----SNPEVVEAEAPSIQAPVSITENESEDTTVPSVVAPTPDPQLPGIE---DHSSEVC 647

Query: 2825 PPVEPD-------RYVLPPRSNRGVPPKRYSPEKEARNSRYPMAN-VAAGNLSPEAKAFA 2980
             P++ +       +YVLP RS RG PPKRY P   A+ S+YP+AN ++   LS    +F 
Sbjct: 648  SPIDTNSSESNVGQYVLPNRSTRGQPPKRYEPTVHAK-SKYPVANYISTRRLSKSYASFV 706

Query: 2981 TSLCSEEIPTTVEQALESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFTIKY 3160
              + +  +P  V+ AL   +WR+AME EM+AL KNDTW+    P GKK VGCRWVFT+K+
Sbjct: 707  NQISAVSVPNKVQDALGDPKWRKAMEEEMEALQKNDTWQLVPPPQGKKAVGCRWVFTVKH 766

Query: 3161 KPDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFDVKN 3340
              DG++ RYKARLVAKG+TQTYGIDY ETF+PVAK++TIRVL S AAN  WPL QFDVKN
Sbjct: 767  NADGSVNRYKARLVAKGFTQTYGIDYDETFAPVAKMNTIRVLLSCAANLNWPLRQFDVKN 826

Query: 3341 AFLHGELKEEVYMEVPPGLMKDPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQ 3520
            AFL+GEL EEVYM +PPG +       VC+L+KSLYGLKQSPRAWFGRFT  MRK+G++Q
Sbjct: 827  AFLYGELAEEVYMSLPPGYVTASPGDFVCKLRKSLYGLKQSPRAWFGRFTQFMRKFGYRQ 886

Query: 3521 SNSDHTLFLKKRNGLVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFLG 3700
            S+SDHTLFLK + G VT LIIYVDDM+ITG+D  EM  L+  L  EFEMKDLG LKYFLG
Sbjct: 887  SHSDHTLFLKHQQGKVTALIIYVDDMVITGNDTMEMDILQRQLASEFEMKDLGELKYFLG 946

Query: 3701 IEVMRSRQGIFICQKKYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQRI 3880
            IEV R R+GI++CQ+KYILDLL ETGM+DCKP+ TP+  N  L    +    D+ +YQR+
Sbjct: 947  IEVARGREGIYLCQRKYILDLLTETGMLDCKPIDTPIEQNHCLAEYPDQVSTDRARYQRL 1006

Query: 3881 VGKLIYLSHTRPDIAYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLF-KTNGHL 4057
            VG+LIYL+HTRPD+AYAV VVSQFMH P  +HM AV RI+RYLK  PG GV+F K N  L
Sbjct: 1007 VGRLIYLAHTRPDVAYAVSVVSQFMHNPSESHMDAVVRILRYLKSAPGRGVMFSKHNNIL 1066

Query: 4058 ETHVYTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAE 4237
            E   +TDADWAG+  +RRSTSGYFT VGGNLVTW+SKKQKVVA SSAEAE+RG+A G+ E
Sbjct: 1067 EVCGFTDADWAGNITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMAHGVCE 1126

Query: 4238 ILWVRKLLTEIGYSPTQSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEAGII 4417
            +LW+R LL ++G+    + ++ CDN+AAI IS+NPVQHDRTKH+EVDRHFIKEKL+A ++
Sbjct: 1127 LLWLRNLLHDLGFKLRSTMQLYCDNRAAIDISQNPVQHDRTKHVEVDRHFIKEKLDAKLV 1186

Query: 4418 ELPFVRSENQLADILTKAVSEKIFNHCLGKLSI 4516
              PFV +E QLADILTK +S K F   L KL +
Sbjct: 1187 SFPFVPTEEQLADILTKGISRKAFYDSLSKLGM 1219


>gb|PRQ42794.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1226

 Score = 1104 bits (2856), Expect = 0.0
 Identities = 570/1110 (51%), Positives = 743/1110 (66%), Gaps = 29/1110 (2%)
 Frame = +2

Query: 1274 WLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYVP 1453
            W+ D GA+D MTYD + F+  S+P  +++  A+GE   V   G+I I+PTL+L N LYVP
Sbjct: 120  WIIDSGASDHMTYDKTYFTELSSPPVSYVTNANGEAFPVLGTGSIRITPTLQLHNVLYVP 179

Query: 1454 SLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVDEV------- 1612
             LSH L+S+  +  E  C++  +P + I QD+ T  +IGRG  R  L+++D+        
Sbjct: 180  DLSHHLISVPQLNTESQCSITFYPMYVIFQDLLTRELIGRGYLRGRLFHLDQTYAGEKPG 239

Query: 1613 TQQGTVMLAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLF--PSNKPINCETCVLAKSHR 1786
             Q  T + ++     E WLWHRRLGHPS   +    P LF   +   + CETCVLAKSHR
Sbjct: 240  AQSRTALTSNSDKLSEVWLWHRRLGHPSFSLMKKSMPTLFIGVNESVLRCETCVLAKSHR 299

Query: 1787 STFKPN-NTKVESPFSLIHSDIWGPA--PVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSE 1957
            +T+ P+ + K   PF LIHSD+WGP+  P + G   RYF+LF+DDCTR++W+  LR K E
Sbjct: 300  ATYPPSFSNKTVIPFELIHSDVWGPSREPTVSGM--RYFVLFIDDCTRLSWVALLRTKDE 357

Query: 1958 VFEKFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGV 2137
            VF  F  F  ++QTQ+  +I++LRSDNG E+VN+  K FFQ  G++HQT+C  TPEQNGV
Sbjct: 358  VFPAFQTFRTLVQTQYNSTIRVLRSDNGGEYVNHFFKDFFQTHGIVHQTTCPQTPEQNGV 417

Query: 2138 VERKNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKI 2317
             ERKNR LL++ RA+L  + +PK  W +AV  +++LINRLP+  L+ K P + L+    +
Sbjct: 418  SERKNRHLLDMARAILFSAHMPKYLWGDAVQASSHLINRLPSSVLQGKIPFEVLASHVSL 477

Query: 2318 PPTLTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTM 2497
            P    L  RVFGC  FVH+PK +R KL   A KCVF+GYG  QKGY+CY+P  R  + TM
Sbjct: 478  PSFHNLPARVFGCVAFVHVPKNQRSKLDARAIKCVFVGYGGYQKGYKCYHPPTRKYYVTM 537

Query: 2498 NCDFLETQ-YFYTKHTG-QGDKDY---------DTLSWLKWMPSSEEVNHSTQDESPQPF 2644
            +  F E   YF +  T  QG+  Y         + L   + +  + +++ S  D  P P 
Sbjct: 538  DVTFFEDMSYFSSSDTVLQGENSYFEDLYHFEGEELERGEEVTQAGDISASLVD-IPYP- 595

Query: 2645 TQFEDPNISATQDAPPNLTSKVSNSQTQECDNSSDSVTNYEEHEHVETIELLEDE----S 2812
                  N    +   P++ + VS ++ +  D +  SV        +  IE+   E    +
Sbjct: 596  -----SNPEVVEAEAPSIQAPVSITENESEDTTVPSVVAPTPEPQLPGIEVHSSEVCSPT 650

Query: 2813 EQESPPVEPDRYVLPPRSNRGVPPKRYSPEKEARNSRYPMAN-VAAGNLSPEAKAFATSL 2989
            +  S      +YVLP RS RG PPK Y P   A+ S+YP+AN ++   LS    +F   +
Sbjct: 651  DTNSSESNVGQYVLPNRSTRGQPPKSYEPTVHAK-SKYPVANYMSTRRLSKSYASFVNQI 709

Query: 2990 CSEEIPTTVEQALESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFTIKYKPD 3169
             +  +P  V+ AL   +WR+AME EM+AL KNDTW+    P GKK VGCRWVFT+K+  D
Sbjct: 710  SAVSVPNKVQDALGDPKWRKAMEEEMEALQKNDTWQLVPPPQGKKAVGCRWVFTVKHNAD 769

Query: 3170 GTIERYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFDVKNAFL 3349
            G++ RYKARLVAKG+TQTYGIDY ETF+PVAK++TIRVL S AAN  WPL QFDVKNAFL
Sbjct: 770  GSVNRYKARLVAKGFTQTYGIDYDETFAPVAKMNTIRVLLSCAANLNWPLRQFDVKNAFL 829

Query: 3350 HGELKEEVYMEVPPGLMKDPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNS 3529
            +GEL EEVYM +PPG +       VC+L+KSLYGLKQSPRAWFGRFT  MRK+G++QS+S
Sbjct: 830  YGELAEEVYMSLPPGYVTASPGDFVCKLRKSLYGLKQSPRAWFGRFTQFMRKFGYRQSHS 889

Query: 3530 DHTLFLKKRNGLVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFLGIEV 3709
            DHTLFLK + G VT LIIYVDDM+ITG+D  EM  L+  L  EFEMKDLG LKYFLGIEV
Sbjct: 890  DHTLFLKHQQGNVTALIIYVDDMVITGNDTMEMDILQRQLASEFEMKDLGELKYFLGIEV 949

Query: 3710 MRSRQGIFICQKKYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQRIVGK 3889
             R R+GI++CQ+KYILDLL ETGM+DCKP+ TP+  N  L    +    D+ +YQR+VG+
Sbjct: 950  ARGREGIYLCQRKYILDLLTETGMLDCKPIDTPIEQNHCLAEYPDQVSTDRARYQRLVGR 1009

Query: 3890 LIYLSHTRPDIAYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLF-KTNGHLETH 4066
            LIYL+HTRPD+AYAV VVSQFMH P  +HM AV RI+RYLK  PG GV+F K N  LE  
Sbjct: 1010 LIYLAHTRPDVAYAVSVVSQFMHNPSESHMDAVVRILRYLKSAPGRGVMFSKHNNILEVC 1069

Query: 4067 VYTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAEILW 4246
             +TDADWAG+  +RRSTSGYFT VGGNLVTW+SKKQKVVA SSAEAE+RG+A G+ E+LW
Sbjct: 1070 GFTDADWAGNITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMAHGVCELLW 1129

Query: 4247 VRKLLTEIGYSPTQSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEAGIIELP 4426
            +R LL ++G+    + ++ CDN+AAI IS+NPVQHDRTKH+EVDRHFIKEKL+A ++  P
Sbjct: 1130 LRNLLHDLGFKLRSTMQLYCDNRAAIDISQNPVQHDRTKHVEVDRHFIKEKLDAKLVSFP 1189

Query: 4427 FVRSENQLADILTKAVSEKIFNHCLGKLSI 4516
            FV +E QLADILTK +S   F   L KL +
Sbjct: 1190 FVPTEEQLADILTKGISRNAFYDSLSKLGM 1219


>dbj|GAU31450.1| hypothetical protein TSUD_72310 [Trifolium subterraneum]
          Length = 1433

 Score = 1101 bits (2848), Expect = 0.0
 Identities = 572/1108 (51%), Positives = 755/1108 (68%), Gaps = 22/1108 (1%)
 Frame = +2

Query: 1265 DKQWLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCL 1444
            D  W+ D GATD MT+D    S      +  I TA+G    +   G++ ++  L L + L
Sbjct: 333  DSLWIIDSGATDHMTFDSKQISHLRPSSQKSISTANGSEASIVGEGSLSLTKNLNLDSVL 392

Query: 1445 YVPSLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVDEVTQQG 1624
             VPSL H LLSIS +T+ L+C V+  P  C+ +DIRT   IG G +R  LYY+D +T +G
Sbjct: 393  VVPSLDHNLLSISQITESLSCVVIFWPNSCVFKDIRTKQTIGYGIKRGKLYYLD-LTSKG 451

Query: 1625 TVMLAHGT---------TRREAWLWHRRLGHPSTRYLHLLFPKLFPS--NKPINCETCVL 1771
              +L             T+ E WLWHRR+GH S  Y+  LFP LF +  +    C+ C L
Sbjct: 452  CNLLCQALKVENSKQNKTKAEVWLWHRRMGHASFDYIKRLFPSLFENIDSSIFCCDVCEL 511

Query: 1772 AKSHRSTFKPNNTKVESPFSLIHSDIWGPAPV--IGGQNFRYFLLFVDDCTRMTWIYFLR 1945
            AKSHR++F+    K   PF +IHSD+WGP+ +  +GG   R+F+ F+DDCTRMTW++ ++
Sbjct: 512  AKSHRTSFRSTLNKSPIPFMVIHSDVWGPSKIQTLGGS--RWFVTFIDDCTRMTWLWLMK 569

Query: 1946 HKSEVFEKFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPE 2125
             KSEV   F  F+ MI+TQ+   IQ+LRSDNG E+ ++ ++QFF+E+G+I+QT+C+ TP+
Sbjct: 570  SKSEVNLLFQKFHKMIKTQYNAQIQVLRSDNGGEYQSSELQQFFEEEGIINQTTCSNTPQ 629

Query: 2126 QNGVVERKNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSE 2305
            QNGVVERKNR LLE+ RA+LI++ +P S+W EA+A A Y INR P+ ++ ++TPL+ LS+
Sbjct: 630  QNGVVERKNRHLLEVVRAILIEANMPLSYWGEALAFAVYSINRTPSRSIAYQTPLKALSD 689

Query: 2306 FTKIPPTLTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHM 2485
                P    L   +FGC VFVH+ K +R KL P A +CVFLGY +++KGYRCY+P  + M
Sbjct: 690  VIIAPSVPNLPLHIFGCVVFVHLHKHQRSKLAPRALRCVFLGYAMHKKGYRCYHPPTQRM 749

Query: 2486 FTTMNCDF-LETQYFYTKHTGQG--DKDYDTLSWLKWMPSSEEVNHSTQDESPQPFTQFE 2656
            F T++  F  E  YF +K   QG   K+YD ++    +  +  +N      S       E
Sbjct: 750  FITIDVVFHEELMYFSSKAELQGKYHKEYDPITCFD-VHDTSVINVDLDINS-----HLE 803

Query: 2657 DPNISATQDAPPNL-TSKVSNSQTQECDNSSDSVTNYEEHEHVETIELLEDESEQESPPV 2833
            D N+   Q   P++   +VS  Q        +   ++EE E +  I      S ++ P +
Sbjct: 804  DENVIDQQSPSPSIEDEEVSGPQIHSPSFEGNKNPSFEEIELLANIPY--QSSTEDVPVL 861

Query: 2834 EPD--RYVLPPRSNRGVPPKRYSPEKEARNSRYPMAN-VAAGNLSPEAKAFATSLCSEEI 3004
            +P+  +  LP R NRG+P  RY PE  ++  +YPM++ V+  NLS   K+FA  L    I
Sbjct: 862  DPEFPKKQLPERHNRGIPKSRYEPEISSK-VKYPMSHYVSNQNLSESNKSFANQLSIISI 920

Query: 3005 PTTVEQALESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFTIKYKPDGTIER 3184
            P +V+ AL   +W+ AM  EM++L KN+TW+    P GKKPVGCRWV+T+KYKPDG IER
Sbjct: 921  PNSVQDALADPKWKAAMNEEMNSLQKNETWDLVDCPKGKKPVGCRWVYTVKYKPDGEIER 980

Query: 3185 YKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFDVKNAFLHGELK 3364
            +KARLVAKGYTQ YGIDY+ETF+PVAKI+T+RVL S+AAN +WPL QFDVKNAFLH EL 
Sbjct: 981  FKARLVAKGYTQAYGIDYTETFAPVAKINTVRVLLSLAANLDWPLQQFDVKNAFLHRELL 1040

Query: 3365 EEVYMEVPPGLMK-DPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNSDHTL 3541
            EEVYM++PPG  K + + ++VC+LKKSLYGLKQSPRAWFGRFT +M  +G+ QSNSDHTL
Sbjct: 1041 EEVYMDLPPGCDKLERHAQKVCKLKKSLYGLKQSPRAWFGRFTKSMIAFGYVQSNSDHTL 1100

Query: 3542 FLKKRNGLVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFLGIEVMRSR 3721
            FLKK+ G +T LIIYVDDM++TG+D EE   L+  L REFEMKDLG LKYFLGIEV RS+
Sbjct: 1101 FLKKQQGKITALIIYVDDMVVTGNDPEERKALQEYLSREFEMKDLGSLKYFLGIEVSRSK 1160

Query: 3722 QGIFICQKKYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQRIVGKLIYL 3901
            +GIF+ Q+KY LDLL ETGM  C+P  +PM    KL+   +    DK +YQR+VGKL+YL
Sbjct: 1161 KGIFLSQRKYALDLLQETGMSACQPAASPMEEGLKLHNITDQVSCDKRRYQRLVGKLMYL 1220

Query: 3902 SHTRPDIAYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLF-KTNGHLETHVYTD 4078
            +HTRPD+AYA+ +VSQFMH P   HM AV  I+RYLK  PG G+LF K   H +  VYTD
Sbjct: 1221 AHTRPDLAYALSIVSQFMHNPSEQHMNAVMHILRYLKFAPGKGILFTKNEKHEDIEVYTD 1280

Query: 4079 ADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAEILWVRKL 4258
            ADWAG   +RRSTSGYF+ VGGNLVTWRSKKQ VVA SSAEAEFRG++ GL E LW++ L
Sbjct: 1281 ADWAGALDDRRSTSGYFSFVGGNLVTWRSKKQNVVARSSAEAEFRGMSLGLCEALWLKHL 1340

Query: 4259 LTEIGYSPTQSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEAGIIELPFVRS 4438
            L ++GY   Q   + CDNKAA  I+ NPVQHDRTKH+EVDR FIKEKL+A I+ELP +RS
Sbjct: 1341 LEDLGYPQRQPIHLYCDNKAACDIAHNPVQHDRTKHVEVDRFFIKEKLDAKILELPKIRS 1400

Query: 4439 ENQLADILTKAVSEKIFNHCLGKLSIEN 4522
            E+QLAD+LTKAVS K+F   L KL +++
Sbjct: 1401 EDQLADMLTKAVSSKVFLKYLHKLGMDD 1428


>gb|PRQ17544.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1226

 Score = 1100 bits (2846), Expect = 0.0
 Identities = 569/1110 (51%), Positives = 742/1110 (66%), Gaps = 29/1110 (2%)
 Frame = +2

Query: 1274 WLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYVP 1453
            W+ D GA+D MTYD + F+  S+P  +++  A+GE   V   G+I I+PTL+L N LYV 
Sbjct: 120  WIIDSGASDHMTYDKTYFTELSSPPVSYVTNANGEAFPVLGTGSIRITPTLQLHNVLYVT 179

Query: 1454 SLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVDEV------- 1612
             LSH L+S+  +  E  C++  +P + I QD+ T  +IGRG  R  L+++D+        
Sbjct: 180  DLSHHLISVPQLNTESQCSITFYPMYVIFQDLLTRELIGRGYLRGRLFHLDQTYAGEKPG 239

Query: 1613 TQQGTVMLAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLF--PSNKPINCETCVLAKSHR 1786
             Q  T + ++     E WLWHRRLGHPS   +    P LF   +   + CETCVLAKSHR
Sbjct: 240  AQSRTALTSNSDKLSEVWLWHRRLGHPSFSLMKKYMPTLFIGVNESVLRCETCVLAKSHR 299

Query: 1787 STFKPN-NTKVESPFSLIHSDIWGPA--PVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSE 1957
            +T+ P+ + K   PF LIHSD+WGP+  P + G   RYF+LF+DDCTR++W+  LR K E
Sbjct: 300  ATYPPSFSNKSVIPFELIHSDVWGPSREPTVSGM--RYFVLFIDDCTRLSWVALLRTKDE 357

Query: 1958 VFEKFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGV 2137
            VF  F  F  ++QTQ+  +I++LRSDNG E+VN+  K FFQ  G++HQT+C  TPEQNGV
Sbjct: 358  VFPAFQTFRTLVQTQYNSTIRVLRSDNGGEYVNHFFKDFFQTHGIVHQTTCPQTPEQNGV 417

Query: 2138 VERKNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKI 2317
             ERKNR LL++ RA+L  + +PK  W +AV  +++LINRLP+  L+ K P + L+    +
Sbjct: 418  SERKNRHLLDMARAILFSAHMPKYLWGDAVQASSHLINRLPSSVLQGKIPFEVLASHVSL 477

Query: 2318 PPTLTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTM 2497
            P    L  RVFGC  FVH+PK +R KL   A KCVF+GYG  QKGY+CY+P  R  + TM
Sbjct: 478  PSFHNLPARVFGCVAFVHVPKNQRSKLDARAIKCVFVGYGGYQKGYKCYHPPTRKYYVTM 537

Query: 2498 NCDFLETQ-YFYTKHTG-QGDKDY---------DTLSWLKWMPSSEEVNHSTQDESPQPF 2644
            +  F E   YF +  T  QG+  Y         + L   + +  + +++ S  D  P P 
Sbjct: 538  DVTFFEDMSYFSSSDTVLQGENSYFEDLYHFEGEELERGEEVTQAGDISASLVD-IPYP- 595

Query: 2645 TQFEDPNISATQDAPPNLTSKVSNSQTQECDNSSDSVTNYEEHEHVETIELLEDE----S 2812
                  N    +   P++ + VS ++ +  D +  SV        +  IE+   E    +
Sbjct: 596  -----SNPEVVEAEAPSIQAPVSITENESEDTTVPSVVAPTPEPQLPGIEVHSSEVCSPT 650

Query: 2813 EQESPPVEPDRYVLPPRSNRGVPPKRYSPEKEARNSRYPMAN-VAAGNLSPEAKAFATSL 2989
            +  S      +YVLP RS RG PPKRY P   A+ S+YP+AN ++   LS    +F   +
Sbjct: 651  DTNSSESNVGQYVLPNRSTRGQPPKRYEPTVHAK-SKYPVANYMSTRRLSKSYASFVNQI 709

Query: 2990 CSEEIPTTVEQALESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFTIKYKPD 3169
             +  +P  V+ AL   +WR+AME EM+AL KNDTW+    P  KK VGCRWVFT+K+  D
Sbjct: 710  SAVSVPNKVQDALGDPKWRKAMEEEMEALQKNDTWQLVPPPQDKKAVGCRWVFTVKHNAD 769

Query: 3170 GTIERYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFDVKNAFL 3349
            G++ RYKARLVAKG+TQTYGIDY ETF+PVAK++TIRVL S AAN  WPL QFDVKNAFL
Sbjct: 770  GSVNRYKARLVAKGFTQTYGIDYDETFAPVAKMNTIRVLLSCAANLNWPLRQFDVKNAFL 829

Query: 3350 HGELKEEVYMEVPPGLMKDPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNS 3529
            +GEL EEVYM +PPG +       VC+L+KSLYGLKQSPRAWFGRFT  MRK+G++QS+S
Sbjct: 830  YGELAEEVYMSLPPGYVTASPGDFVCKLRKSLYGLKQSPRAWFGRFTQFMRKFGYRQSHS 889

Query: 3530 DHTLFLKKRNGLVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFLGIEV 3709
            DHTLFLK + G VT LIIYVDDM+ITG+D  EM  L+  L  EFEMKDLG LKYFLGIEV
Sbjct: 890  DHTLFLKHQQGNVTALIIYVDDMVITGNDTMEMDILQRQLASEFEMKDLGELKYFLGIEV 949

Query: 3710 MRSRQGIFICQKKYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQRIVGK 3889
             R R+GI++CQ+KYILDLL ETGM+DCKP+ TP+  N  L    +    D+ +YQR+VG+
Sbjct: 950  ARGREGIYLCQRKYILDLLTETGMLDCKPIDTPIEQNHCLAEYPDQVSTDRARYQRLVGR 1009

Query: 3890 LIYLSHTRPDIAYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLF-KTNGHLETH 4066
            LIYL+HTRPD+AYAV VVSQFMH P  +HM AV RI+RYLK  PG GV+F K N  LE  
Sbjct: 1010 LIYLAHTRPDVAYAVSVVSQFMHNPSESHMDAVVRILRYLKSAPGRGVMFSKHNNILEVC 1069

Query: 4067 VYTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAEILW 4246
             +TDADWAG+  +RRSTSGYFT VGGNLVTW+SKKQKVVA SSAEAE+RG+A G+ E+LW
Sbjct: 1070 GFTDADWAGNITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMAHGVCELLW 1129

Query: 4247 VRKLLTEIGYSPTQSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEAGIIELP 4426
            +R LL ++G+    + ++ CDN+AAI IS+NPVQHDRTKH+EVDRHFIKEKL+A ++  P
Sbjct: 1130 LRNLLHDLGFKLRSTMQLYCDNRAAIDISQNPVQHDRTKHVEVDRHFIKEKLDAKLVSFP 1189

Query: 4427 FVRSENQLADILTKAVSEKIFNHCLGKLSI 4516
            FV +E QLADILTK +S   F   L KL +
Sbjct: 1190 FVPTEEQLADILTKGISRNAFYDSLSKLGM 1219


>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score = 1092 bits (2824), Expect = 0.0
 Identities = 565/1134 (49%), Positives = 749/1134 (66%), Gaps = 53/1134 (4%)
 Frame = +2

Query: 1274 WLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYVP 1453
            W+ D GA+D MTYD S F S S+P  +H+  A+G    V   G+I+++P++ L + LYVP
Sbjct: 44   WIIDSGASDHMTYDKSFFVSMSSPSISHVSNANGVSFPVLGIGSIQVTPSIVLHDVLYVP 103

Query: 1454 SLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVD-------EV 1612
            SLSH LLS+S +  +  C+V  +P + + Q++   +IIG+G  R  L+++D       + 
Sbjct: 104  SLSHHLLSVSQLNSQNKCSVTFYPMYVVFQNLCNRMIIGKGDLRGRLFHLDCMYAGQIQA 163

Query: 1613 TQQGTVMLAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLFP--SNKPINCETCVLAKSHR 1786
             +Q   +        E WLWHRRLGHPS R +    P LF   S+  ++CETC LAKSHR
Sbjct: 164  PEQPLTLTLSSDRLSEVWLWHRRLGHPSFRVMKKSMPSLFLGISDSSLHCETCALAKSHR 223

Query: 1787 STFKPNNTKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSEVFE 1966
            S++  +      PF LIHSD+WGP+        RYF+LF+DD TR++W+  L+ K  VF 
Sbjct: 224  SSYPSSFHSSTMPFELIHSDVWGPSKHSTLSGMRYFVLFIDDFTRLSWVVLLKSKDSVFS 283

Query: 1967 KFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGVVER 2146
             F  F+++++TQ+   +++ RSDNG EFVN+S  ++FQ  G+IHQTSC  TPEQNGV ER
Sbjct: 284  AFRAFHSLVRTQYDAHVKVFRSDNGGEFVNHSFHEYFQHHGIIHQTSCPQTPEQNGVSER 343

Query: 2147 KNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKIPPT 2326
            KNR LL++ R+LL+ + +PK  W EAV  A++LINRLP+  L+ + PL+ LS +  IP +
Sbjct: 344  KNRHLLDMARSLLLSANMPKYLWGEAVLCASHLINRLPSAPLQGRVPLEVLSNYVSIPSS 403

Query: 2327 LTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTMNCD 2506
             TL  RVFGC  +VH+ K +R KL   A KCVF+GYG +QKGY+CY+P  +  + TM+  
Sbjct: 404  NTLPARVFGCVAYVHLYKNQRSKLDARALKCVFVGYGSHQKGYKCYHPQSQKFYVTMDVS 463

Query: 2507 FLE----------------TQYFYTKHTGQGDKDYDTLSWLKWMPSS-EEVNHSTQDESP 2635
            F E                + Y+     GQ +      S L+ + +  E    ++ D S 
Sbjct: 464  FSEDACYFLPPVTPRQGERSYYYEDLFNGQDESLESEFSRLECLGTELENEGRNSTDLSS 523

Query: 2636 QPFTQFEDPNISATQDAPPNLTSKVSNSQTQECDNSSDSVTNYEEHEHV--ETIELLEDE 2809
            +  T+  +      ++A  N+   +   Q  + D S+  + +    ++V   +  +L + 
Sbjct: 524  ELETENRENMDLVGEEALGNV---LPTGQPDQSDQSAGEIVSDPVSDNVLQSSDGVLNNS 580

Query: 2810 S----------EQESPPVEPD--------------RYVLPPRSNRGVPPKRYSPEKEARN 2917
            S           Q SP V P+                +LP RS RG PPK Y P   A+ 
Sbjct: 581  SVSPSHSAVSPAQSSPEVCPNLSLSNSSSVSGSVPTKILPSRSTRGQPPKHYEPTLSAK- 639

Query: 2918 SRYPMAN-VAAGNLSPEAKAFATSLCSEEIPTTVEQALESKEWREAMEVEMDALNKNDTW 3094
            ++YP+A  V+   LS    AF   L S  +P+ V+ A++ ++W +AM VEMDAL KN TW
Sbjct: 640  AKYPVAKYVSTHRLSKPYAAFVNQLSSVSLPSKVQDAMKDEKWMKAMTVEMDALEKNCTW 699

Query: 3095 ERCTLPPGKKPVGCRWVFTIKYKPDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKIDT 3274
            E  +LP GKK VGCRWV+T+K+  DG+++RYKARLVAKGYTQ YG+DY ETF+PVAKI+T
Sbjct: 700  ELVSLPQGKKTVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQKYGVDYDETFAPVAKINT 759

Query: 3275 IRVLFSIAANKEWPLLQFDVKNAFLHGELKEEVYMEVPPGLMKDPNTREVCRLKKSLYGL 3454
            IRVL S+AAN +WPL QFDVKNAFLHG+L EEVYM++PPG       + VC+LKKSLYGL
Sbjct: 760  IRVLLSLAANLDWPLQQFDVKNAFLHGDLHEEVYMDLPPGYGTSTGEQVVCKLKKSLYGL 819

Query: 3455 KQSPRAWFGRFTLAMRKYGFKQSNSDHTLFLKKRNGLVTCLIIYVDDMIITGDDKEEMSK 3634
            KQSPRAWFGRFT  M+K G++QSNSDHTLFLK R G VT LIIYVDDM++TGDD EE+ +
Sbjct: 820  KQSPRAWFGRFTKFMKKIGYRQSNSDHTLFLKHRCGKVTALIIYVDDMVVTGDDIEEIQR 879

Query: 3635 LKVNLFREFEMKDLGRLKYFLGIEVMRSRQGIFICQKKYILDLLAETGMIDCKPMGTPML 3814
            L+  L  EFEMKDLG LKYFLGIEV R +  I + Q+KY+LDLLAETGM+DCKP+ TP+ 
Sbjct: 880  LQGQLSSEFEMKDLGNLKYFLGIEVARGKDCIVLSQRKYVLDLLAETGMLDCKPVATPIE 939

Query: 3815 PNQKLYMEENAKLADKGKYQRIVGKLIYLSHTRPDIAYAVGVVSQFMHQPQVTHMKAVWR 3994
             N +L    +    +KG+YQR+VG+LIYLSHTRPD+AYAV VVSQFMH P   HM AV+R
Sbjct: 940  QNHQLAEYLDQVPTNKGRYQRLVGRLIYLSHTRPDLAYAVSVVSQFMHNPSEAHMDAVFR 999

Query: 3995 IIRYLKGTPGHGVLFKTNGHLETHVYTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQ 4174
            I++YLK  PG G++F    HL+   YTDADWAG   +RRSTSGYFT VGGNLVTW+SKKQ
Sbjct: 1000 ILQYLKSAPGKGLIFSKYSHLDVSGYTDADWAGSITDRRSTSGYFTFVGGNLVTWKSKKQ 1059

Query: 4175 KVVALSSAEAEFRGIARGLAEILWVRKLLTEIGYSPTQSSKILCDNKAAIQISENPVQHD 4354
            KVVA SSAEAE+RG+ARGL E+LW+R LL ++G+   ++  + CDNKAAI+I+ NPVQHD
Sbjct: 1060 KVVARSSAEAEYRGMARGLCEMLWLRNLLNDLGFRQKKAMPLYCDNKAAIEIAHNPVQHD 1119

Query: 4355 RTKHIEVDRHFIKEKLEAGIIELPFVRSENQLADILTKAVSEKIFNHCLGKLSI 4516
            RTKH+EVDRHFIKEKL+  II  PFV +E QLADILTKA+S K F   L KL I
Sbjct: 1120 RTKHVEVDRHFIKEKLDGQIILFPFVPTEEQLADILTKALSTKAFYDSLDKLGI 1173


>emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]
          Length = 1409

 Score = 1089 bits (2816), Expect = 0.0
 Identities = 563/1096 (51%), Positives = 727/1096 (66%), Gaps = 13/1096 (1%)
 Frame = +2

Query: 1274 WLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYVP 1453
            W+ D GATD MT+D  DFS  + P                                    
Sbjct: 381  WIIDFGATDHMTFDPCDFSKATQP------------------------------------ 404

Query: 1454 SLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVDEVTQ-QGTV 1630
                K + I+      N   + +P      DI T  IIGRGT+R+GLYY+D+ +  +   
Sbjct: 405  ----KRICIA------NANGVTYP------DILTKEIIGRGTKREGLYYMDDFSYGRANN 448

Query: 1631 MLAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLFP--SNKPINCETCVLAKSHRSTFKPN 1804
            M + G   R+ WLWH RLGHPS RYL  LF  LF   +     CE C+ AKSH+  +  +
Sbjct: 449  MHSAGVKERQIWLWHNRLGHPSFRYLRCLFLDLFTKFNESDFKCEACIQAKSHQVPYSIS 508

Query: 1805 NTKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSEVFEKFTWFY 1984
              K ++ F ++HSD+WGPAP+    + R+F+ FVDDCTRMTW+Y +++K EVFE F  F+
Sbjct: 509  LNKCDTXFLIVHSDVWGPAPITISSSVRWFVTFVDDCTRMTWLYVMKNKHEVFEIFRSFH 568

Query: 1985 AMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGVVERKNRILL 2164
             MI+TQF   +QILRSDNG E+ N    ++FQE G+ H+TSC+ TP+QNGV ERKN  +L
Sbjct: 569  NMIRTQFXAKLQILRSDNGGEYDNAQFHRYFQEHGLHHETSCSQTPQQNGVAERKNXHIL 628

Query: 2165 EITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKIPPTLTLKPR 2344
            EITRALL  + VPK FWP+AV TA YL+NRL +  L +KTPLQ L++   +P  L L PR
Sbjct: 629  EITRALLTAAYVPKRFWPBAVMTAVYLMNRLXSRVLHYKTPLQVLAQHVTLPSVLMLPPR 688

Query: 2345 VFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTMNCDFLETQY 2524
             FGC  +VH+ K +R KL PCA  CVFLGY  ++KGYRCY+P  R ++TTM+        
Sbjct: 689  KFGCVTYVHLHKNQRTKLDPCAVXCVFLGYATHKKGYRCYDPATRRLYTTMD-------- 740

Query: 2525 FYTKHTGQGDKDYDTLSWLKWMPSSEEVNHSTQDESP-QPFTQFEDPNISATQDAPPNLT 2701
                    G+   +  +W  W P  EE ++  ++  P +P     D       +   ++ 
Sbjct: 741  --------GEMXSEEQNWENW-PGFEETSNDIREVXPREPMAILIDQX--GEVENVEHVE 789

Query: 2702 SKVSNSQTQECDNSSDSVTNYEEHEHVETIELLEDESEQESPPVEP--------DRYVLP 2857
            +++    T+   N        E+  H  T+  L D+S +  P V+           Y LP
Sbjct: 790  AEIEQQPTRVYQNGEVXEIESEQPFHDLTVPQL-DQSPENIPEVQVLNSPHNIFSGYKLP 848

Query: 2858 PRSNRGVPPKRYSPEKEARNSRYPMAN-VAAGNLSPEAKAFATSLCSEEIPTTVEQALES 3034
             R NRG PP RYSP+     S+YP+AN ++   LS   KA    L ++ +P TV +A+ +
Sbjct: 849  FRHNRGQPPNRYSPDHGTSKSKYPIANHISTQKLSEPLKALVHKLSADXVPDTVSEAMNN 908

Query: 3035 KEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFTIKYKPDGTIERYKARLVAKGY 3214
             +W + +E EM AL KNDTW    LP GKK VGCRWVF+ K+K DG++ERYKARLVAKGY
Sbjct: 909  PKWIQXIEEEMKALQKNDTWALVPLPXGKKTVGCRWVFSXKHKXDGSVERYKARLVAKGY 968

Query: 3215 TQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFDVKNAFLHGELKEEVYMEVPPG 3394
            TQTYG+DY ETFSP AK++T+RVL S+AAN +WPL QFDVKNAFLHG+L+EEVYM++PPG
Sbjct: 969  TQTYGVDYQETFSPXAKLNTVRVLISLAANLDWPLHQFDVKNAFLHGDLEEEVYMDIPPG 1028

Query: 3395 LMKDPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNSDHTLFLKKRNGLVTC 3574
             +     +EVC+L+K+LYGLKQSPRAWFGRF+LAMRK+GFKQSN DHTLFLK + G VT 
Sbjct: 1029 FVSSTQGKEVCKLQKALYGLKQSPRAWFGRFSLAMRKHGFKQSNXDHTLFLKHQRGKVTA 1088

Query: 3575 LIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFLGIEVMRSRQGIFICQKKYI 3754
            LIIYVDDMIITG+D+EE+SKL+ +L  EFEMK+LG LKYFLGIEV RS++GIF+ Q+KY+
Sbjct: 1089 LIIYVDDMIITGNDEEEISKLQEHLAXEFEMKNLGGLKYFLGIEVARSKRGIFLSQRKYV 1148

Query: 3755 LDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQRIVGKLIYLSHTRPDIAYAV 3934
            LDLL+E GM+DC+P  TP++ N  L    N    +K +YQR+VGKLIYLSHTRPDIAYAV
Sbjct: 1149 LDLLSEIGMLDCRPADTPVVQNHGLGEFPNQTPTNKERYQRLVGKLIYLSHTRPDIAYAV 1208

Query: 3935 GVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLFKTNGHLETHVYTDADWAGDKGNRRS 4114
             +VSQFMH P   HM AV RI+RYLK +P  G++F  N HL    YTDADWA +  +R+S
Sbjct: 1209 SLVSQFMHCPSEDHMSAVVRILRYLKSSPRRGLMFTKNQHLHIDGYTDADWAWNITDRKS 1268

Query: 4115 TSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAEILWVRKLLTEIGYSPTQSS 4294
            TSGYFT VGGNLVTWRSKK KVVALSSAEAEFRG+ +GL E+LW+++LL EI  S   + 
Sbjct: 1269 TSGYFTFVGGNLVTWRSKKHKVVALSSAEAEFRGMTKGLCELLWLKRLLEEIKCSSQNTM 1328

Query: 4295 KILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEAGIIELPFVRSENQLADILTKAV 4474
             + CDNKAAI I+ NPVQHDRTKH+EVDRHFIK+KLE  +I+ PFV+SE+QLA+ILTKAV
Sbjct: 1329 NLFCDNKAAIAIAHNPVQHDRTKHVEVDRHFIKQKLEDKVIQFPFVKSEDQLANILTKAV 1388

Query: 4475 SEKIFNHCLGKLSIEN 4522
            S KIF++ L KL I++
Sbjct: 1389 SSKIFHNSLDKLGIDD 1404


>gb|PRQ41835.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1245

 Score = 1085 bits (2806), Expect = 0.0
 Identities = 560/1116 (50%), Positives = 731/1116 (65%), Gaps = 35/1116 (3%)
 Frame = +2

Query: 1274 WLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYVP 1453
            W+ D GA+D MT D     S     +  I TA G    V   G++ +SP+L L   L VP
Sbjct: 125  WIIDTGASDHMTNDPDLLQSIKPSAQAIISTADGSPSSVIGEGSVILSPSLTLDTVLVVP 184

Query: 1454 SLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVDEVTQQGTVM 1633
            SL++ LLS+S +T  L+C V+  P FCI QDI T  I+G G  R  LYY+D +T +G   
Sbjct: 185  SLAYNLLSVSQITAALSCLVIFWPAFCIFQDILTRKILGYGVRRGNLYYLD-LTDKGNQK 243

Query: 1634 LAHG-------TTRREAWLWHRRLGHPSTRYLHLLFPKLFP--SNKPINCETCVLAKSHR 1786
            L            +   WLWHRRLGH S  YL  L P LF   S+    C  C LAKSHR
Sbjct: 244  LGQAHKAGGVEDAKAAVWLWHRRLGHLSFGYLRKLKPHLFSGVSDSDFKCHVCELAKSHR 303

Query: 1787 STFKPNNTKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSEVFE 1966
             ++ P+  K   PF  +HSD+WGPA        +YF+ F+D+CTRMTW+  +++K E+ +
Sbjct: 304  ISYSPSFNKSSIPFMTVHSDVWGPAKYSTMSGAKYFVTFIDECTRMTWVMLMKNKWELCQ 363

Query: 1967 KFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGVVER 2146
             F  F+ M+ +Q+++ IQ+L+SDNG E+ +N+M +F Q +G+ HQTSCAYTP+QNG+ ER
Sbjct: 364  AFQAFHKMVSSQYQRKIQVLQSDNGGEYTSNAMAEFCQSQGIHHQTSCAYTPQQNGLAER 423

Query: 2147 KNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKIPPT 2326
            KNR LLE+ RA L    VP+ +W EA+ +ATYLINR P+  + F+TP Q L      P  
Sbjct: 424  KNRQLLEVIRASLFGMNVPREYWGEALKSATYLINRTPSSVIDFETPQQKLCRLVSAPTL 483

Query: 2327 LTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTMNCD 2506
              L+PRVFGC  +VHIPK  R+KL PCA++C+F+GY   +KGYRCY+P  + +  +++  
Sbjct: 484  PNLEPRVFGCVAYVHIPKPLRNKLDPCAKRCIFVGYAEFKKGYRCYDPQTKTLHVSLDVS 543

Query: 2507 FLETQYFYT----KHTGQGDKDYDTLSWLKWMPSSEEV----------NHSTQDESPQPF 2644
            F E + ++T    + + QG+K Y   +        EEV          N S +  +    
Sbjct: 544  FHEGEAYFTGKAQEPSLQGEKRYMEENSQDIFSEIEEVEERLLQQVLFNPSNEGTTSSNS 603

Query: 2645 TQFEDPNISATQDAPP--NLTSKVSNSQTQECD-------NSSDSVTNYEEHEHVETIEL 2797
            T     +     D P   N + ++     +E D       +   S   + +  H + + L
Sbjct: 604  TPAAPADSEGFLDPPNCLNQSDRLMEQTEEEADLPPSTPLHEDTSRETHPQVNHCQEVSL 663

Query: 2798 LED-ESEQESPPVEPDRYVLPPRSNRGVPPKRYSPEKEARNSRYPMAN-VAAGNLSPEAK 2971
                ES   S P+       P RSN+G+P K+Y PE  A+  +YP+AN V+   LS    
Sbjct: 664  YNPIESNHSSVPIRHVEPRYPQRSNKGIPRKQYEPELRAK-VKYPIANHVSTHRLSESYA 722

Query: 2972 AFATSLCSEEIPTTVEQALESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFT 3151
                 L +  IP TV++AL+  +WR AM  EM+AL KN TWE   LP GKK VGCRW++T
Sbjct: 723  LTINQLSTVAIPRTVQEALDDPKWRTAMNEEMEALQKNATWEIVPLPQGKKTVGCRWIYT 782

Query: 3152 IKYKPDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFD 3331
            +K K DG I+RYKARLVAKGYTQ YG+DY ETF+PVAKI+TIR+L S+AA  +WPL Q+D
Sbjct: 783  VKLKADGGIDRYKARLVAKGYTQKYGVDYQETFAPVAKINTIRILMSLAATYDWPLQQYD 842

Query: 3332 VKNAFLHGELKEEVYMEVPPGLM-KDPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRKY 3508
            VKNAFLHG+L+EEVYM++PPG   +     +VCRLKKSLYGLKQSPRAWFGRFT AM+ +
Sbjct: 843  VKNAFLHGDLEEEVYMDMPPGSQCRLSEVGKVCRLKKSLYGLKQSPRAWFGRFTKAMKAF 902

Query: 3509 GFKQSNSDHTLFLKKRNGLVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLK 3688
            G++QSNSDHTLF++++ G +T LI+YVDDM++TGDD  E   L+  L  EFEMKDLG+LK
Sbjct: 903  GYRQSNSDHTLFIRRKAGKLTVLIVYVDDMVVTGDDPVERKALQDYLATEFEMKDLGKLK 962

Query: 3689 YFLGIEVMRSRQGIFICQKKYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGK 3868
            YFLGIEV RS++GI + Q+KY+LDLL +TGM+DC+P  TPM  N +L   ++   A+K +
Sbjct: 963  YFLGIEVARSKEGISLSQRKYVLDLLTDTGMLDCQPADTPMEMNHRLGEWKDQVPANKSR 1022

Query: 3869 YQRIVGKLIYLSHTRPDIAYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLFKTN 4048
            YQ +VG+LIYLSHTRPDIAYAV VVSQFMH P   HM AV+RI+RYLK  PG G+LF   
Sbjct: 1023 YQCLVGRLIYLSHTRPDIAYAVSVVSQFMHAPSEDHMNAVYRILRYLKAAPGKGLLFAKK 1082

Query: 4049 GHLETHVYTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARG 4228
              L    YTDADWAG K +RRSTSGYFT VGGNLVTWR KKQKVVA SSAEAEFRG+A G
Sbjct: 1083 DKLIVEGYTDADWAGSKVDRRSTSGYFTFVGGNLVTWRCKKQKVVARSSAEAEFRGMAHG 1142

Query: 4229 LAEILWVRKLLTEIGYSPTQSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEA 4408
            + E+LW+R LL ++G+   +S  + CDNKAAI+I+ NPVQHDRTKH+EVDRHFIKE L+ 
Sbjct: 1143 VCELLWIRHLLKDLGFKSRKSMDLHCDNKAAIEIAHNPVQHDRTKHVEVDRHFIKENLDR 1202

Query: 4409 GIIELPFVRSENQLADILTKAVSEKIFNHCLGKLSI 4516
             II  PFV+SE QLADILTKAVS K+FN  L KL +
Sbjct: 1203 KIIRFPFVQSEEQLADILTKAVSGKVFNSSLDKLGM 1238


>gb|KYP39692.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1082

 Score = 1085 bits (2805), Expect = 0.0
 Identities = 551/1098 (50%), Positives = 719/1098 (65%), Gaps = 27/1098 (2%)
 Frame = +2

Query: 1304 MTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYVPSLSHKLLSIS 1483
            M +D S         ++ I TA+G    +   GTI +S TL L + L VPSL   LLS+S
Sbjct: 1    MIHDASTLKHCFPCSKSTITTANGGSASITGQGTITLSKTLTLHSVLVVPSLDFNLLSVS 60

Query: 1484 HVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVDEVTQQGTVMLAHGTT-RRE 1660
             +T +LNC+V+  PTFC+ QDI+T VI+G G  R  LY++D         ++ G +    
Sbjct: 61   RLTSQLNCSVIFWPTFCVFQDIQTKVILGYGVRRGNLYFLD---------VSEGDSFHSA 111

Query: 1661 AWLWHRRLGHPSTRYLHLLFPKLFPSNKP--INCETCVLAKSHRSTFKPNNTKVESPFSL 1834
            AWLWH+RLGH S  YL  LFP LF +  P    C TC +AKSHR  F P+  K   PF +
Sbjct: 112  AWLWHKRLGHLSFGYLQKLFPHLFSNCHPSKFQCSTCEMAKSHRIPFYPSLNKSCIPFQV 171

Query: 1835 IHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSEVFEKFTWFYAMIQTQFKKS 2014
            IHSDIWGPA V    +  Y++ F+D+CTRM WI  L+HK++VF  F  F+ M+QTQF  S
Sbjct: 172  IHSDIWGPAKVPSFSHSYYYVSFIDECTRMVWISLLKHKNDVFPVFQKFHNMVQTQFNTS 231

Query: 2015 IQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGVVERKNRILLEITRALLIDS 2194
            IQI ++DNG E+ N    +F   KG+ HQTSC YTP+QNG+ ERKNR LLE+ RA L D 
Sbjct: 232  IQIFQTDNGLEYKNGPFSEFLTSKGIKHQTSCTYTPQQNGLAERKNRQLLEVVRASLFDM 291

Query: 2195 QVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKIPPTLTLKPRVFGCSVFVHI 2374
             VP  +W EAV +A YLINR P+  L F TP Q L  F  IP  + L+PRVFGC+ +VH+
Sbjct: 292  NVPSHYWGEAVLSAAYLINRTPSSVLGFLTPQQKLETFFSIPHVMNLEPRVFGCTAYVHV 351

Query: 2375 PKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTMNCDFLETQYFYTKHTGQGD 2554
            PK  R KL PCA+KC+F+GY   QKGYRC++P    M  T+   F E++ FY+       
Sbjct: 352  PKKLRSKLDPCAKKCIFVGYSDVQKGYRCFDPQTHKMHVTLEVSFRESEPFYSGGVTPSS 411

Query: 2555 KDYDTLSWLKWMPSSEEVNHSTQDESPQPFTQFEDPNISATQDAPPNLTSK---VSNSQT 2725
                         S  E++H  ++E   P      P    T D+PPN        +N   
Sbjct: 412  -------------SQGEIHHIREEEFCLPLPMTPTPTSPLTMDSPPNQNPSPEVFTNLPG 458

Query: 2726 QECDNSSDSVTN------YEEHEHV---------ETIELLEDESEQESPPVEPDRYVLP- 2857
             +  N+S    N      Y    HV          T E+        S P   + + +  
Sbjct: 459  TDLVNASHPPQNETPSLPYIPESHVMDSSETHLEPTTEVTSVPVVNSSTPTSSNTHNIQI 518

Query: 2858 ---PRSNRGVPPKRYSPEKEARNSRYPMANVAAGNLSPEAKAFATSLCS-EEIPTTVEQA 3025
                R N+G+P   Y P+   +  +YP+++  + +   E+ A      S   IP +V++A
Sbjct: 519  RRSERQNKGIPKPVYEPDPRVK-VKYPISSYVSSHRLSESYALTVDQLSIVSIPNSVQEA 577

Query: 3026 LESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFTIKYKPDGTIERYKARLVA 3205
            LE   W++AM +EM+AL KN+TW+  +LP GKK +GC+WV+T+K K DG+I++YKARLVA
Sbjct: 578  LEDPRWKQAMNIEMEALQKNETWKLTSLPSGKKTIGCKWVYTVKLKADGSIDKYKARLVA 637

Query: 3206 KGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFDVKNAFLHGELKEEVYMEV 3385
            KGYTQ YG+DY +TF+PVAK++TIR+L SIAAN++WPL QFDVKNAFL+G+L+EEVYMEV
Sbjct: 638  KGYTQKYGVDYQDTFAPVAKLNTIRILISIAANRDWPLKQFDVKNAFLNGDLEEEVYMEV 697

Query: 3386 PPGLMKDPNTREV-CRLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNSDHTLFLKKRNG 3562
            PPG+   P+   V C+LKK+LYGLKQSPRAWFGR TLAM+K+G+KQSNSDHTLF+K   G
Sbjct: 698  PPGVQLAPSKESVVCKLKKALYGLKQSPRAWFGRLTLAMKKFGYKQSNSDHTLFIKHTKG 757

Query: 3563 LVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFLGIEVMRSRQGIFICQ 3742
             V  LI+YVDDM++TGDD EEM  L+  L  EFEMKDLG+LKYFLGIE+ RS QGI + Q
Sbjct: 758  KVAILIVYVDDMVLTGDDVEEMKLLEKRLAAEFEMKDLGQLKYFLGIEIARSEQGISLSQ 817

Query: 3743 KKYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQRIVGKLIYLSHTRPDI 3922
            +KY+LDLL+ETGM+ CKP  TP+  N  L +  +    DK +YQR+VGKLIYLSHTRPDI
Sbjct: 818  RKYVLDLLSETGMLACKPADTPIEMNHSLAIYPDQIETDKHRYQRLVGKLIYLSHTRPDI 877

Query: 3923 AYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLFKTNGHLETHVYTDADWAGDKG 4102
            AY+V +VS+FMH P   HM  V+RI++YLKG+PG G+LF  N       YTD+DWAGDK 
Sbjct: 878  AYSVSIVSRFMHSPSEEHMTTVYRILKYLKGSPGKGLLFSKNDRACIKGYTDSDWAGDKT 937

Query: 4103 NRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAEILWVRKLLTEIGYSP 4282
             R+STSGYFT V GNLVTWRSKKQKVVA SSA+AEFRG+A G+ E+LW+R +L ++G   
Sbjct: 938  TRQSTSGYFTFVEGNLVTWRSKKQKVVARSSAKAEFRGMAYGICELLWIRSILADLGIKY 997

Query: 4283 TQSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEAGIIELPFVRSENQLADIL 4462
             Q   + CDNKA ++I+ NPVQHDRTKH+EVDRHFIKEKL+  +I+ P+VRSE+QL D+L
Sbjct: 998  EQPMNLFCDNKAVVEIAHNPVQHDRTKHVEVDRHFIKEKLDNHVIQTPYVRSEDQLVDVL 1057

Query: 4463 TKAVSEKIFNHCLGKLSI 4516
            TKAVS ++F   + KL +
Sbjct: 1058 TKAVSGRVFEEVINKLGM 1075


>gb|PRQ55789.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1127

 Score = 1082 bits (2797), Expect = 0.0
 Identities = 560/1126 (49%), Positives = 744/1126 (66%), Gaps = 53/1126 (4%)
 Frame = +2

Query: 1304 MTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYVPSLSHKLLSIS 1483
            MTYD S F S S+P  + +  A+G    V   G+I+++P++ L + LYVPSLSH LLS+S
Sbjct: 1    MTYDKSFFVSMSSPSISRVSNANGASFPVLGIGSIQVTPSMVLHDVLYVPSLSHHLLSVS 60

Query: 1484 HVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVD-------EVTQQGTVMLAH 1642
             +  +  C+V  +P + + Q++   VIIG+G  R  L+++D       +  +Q   +   
Sbjct: 61   QLNSQNKCSVTFYPMYVVFQNLCNRVIIGKGDLRGRLFHLDCMYAGQTQAPEQPLALTLS 120

Query: 1643 GTTRREAWLWHRRLGHPSTRYLHLLFPKLFP--SNKPINCETCVLAKSHRSTFKPNNTKV 1816
                 E WLWHRRLGHPS R +    P LF   S+  ++CETC LAKSHRS++  +    
Sbjct: 121  SDRLSEVWLWHRRLGHPSFRVMKKSMPSLFLGISDSSLHCETCALAKSHRSSYPSSFHSS 180

Query: 1817 ESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSEVFEKFTWFYAMIQ 1996
              PF LIHSD+WGP+        RYF+LF+DD TR++W+  L+ K  VF  F  F+++++
Sbjct: 181  TMPFELIHSDVWGPSKHSTLSGMRYFVLFIDDFTRLSWVVLLKSKDSVFSAFRAFHSLVR 240

Query: 1997 TQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGVVERKNRILLEITR 2176
            TQ+   +++ RSDNG EFVN+S  ++FQ  G+IHQTSC  TPEQNGV ERKNR LL++ R
Sbjct: 241  TQYDAHVKVFRSDNGGEFVNHSFHEYFQHHGIIHQTSCPQTPEQNGVSERKNRHLLDMAR 300

Query: 2177 ALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKIPPTLTLKPRVFGC 2356
            +LL+ + +PK  W EAV  A++LINRLP+  L+ + PL+ LS +  IP + TL  RVFGC
Sbjct: 301  SLLLSANMPKYLWGEAVLCASHLINRLPSAPLQGRVPLEVLSNYVSIPSSNTLPARVFGC 360

Query: 2357 SVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTMNCDFLE------- 2515
              +VH+ K +R KL   A KCVF+GYG +QKGY+CY+P  +  + TM+  F E       
Sbjct: 361  VAYVHLYKNQRSKLDARALKCVFVGYGSHQKGYKCYHPQSQKFYVTMDVSFREDACYFLP 420

Query: 2516 ---------TQYFYTKHTGQGDKDYDTLSWLKWMPSS-EEVNHSTQDESPQPFTQFEDPN 2665
                     + Y+     GQ +      S L+ + +  E+   S+ D S +  T+  +  
Sbjct: 421  PVTPRQGERSYYYEDLFNGQDESLESEFSRLECLGTELEKEGRSSTDPSSELETENRENM 480

Query: 2666 ISATQDAPPNLTSKVSNSQTQECDNSSDSVTNYEEHEHV--ETIELLEDES--------- 2812
                ++A  N+   +   Q  + D S+  + +    ++V   +  +L + S         
Sbjct: 481  DLVGEEALGNV---LPTGQPDQSDQSAGEIVSDPVSDNVLQSSDGVLNNSSFSPSPSAVS 537

Query: 2813 -EQESPPVEPD--------------RYVLPPRSNRGVPPKRYSPEKEARNSRYPMAN-VA 2944
              Q SP V P+                +LP RS RG PPK Y P   A+ ++YP+A  V+
Sbjct: 538  PAQSSPEVCPNLSLSNSSSVSGSVPTKILPSRSTRGQPPKHYEPTLSAK-AKYPVAKYVS 596

Query: 2945 AGNLSPEAKAFATSLCSEEIPTTVEQALESKEWREAMEVEMDALNKNDTWERCTLPPGKK 3124
               LS    AF   L S  +P+ V+ A++ ++W +AM VEMDAL KN TWE  +LPPGKK
Sbjct: 597  THRLSKPYAAFVNQLSSVSLPSKVQDAMKDEKWMKAMTVEMDALEKNCTWELVSLPPGKK 656

Query: 3125 PVGCRWVFTIKYKPDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAAN 3304
             VGCRWV+T+K+  DG+++RYKARLVAKGYTQ YG+DY ETF+PVAKI+TIRVL S+AAN
Sbjct: 657  TVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQKYGVDYDETFAPVAKINTIRVLLSLAAN 716

Query: 3305 KEWPLLQFDVKNAFLHGELKEEVYMEVPPGLMKDPNTREVCRLKKSLYGLKQSPRAWFGR 3484
             +WPL QFDVKNAFLHG+L EEVYM++PPG       + VC+LKKSLYGLKQSPRAWFGR
Sbjct: 717  LDWPLQQFDVKNAFLHGDLHEEVYMDLPPGYGTSTGEQVVCKLKKSLYGLKQSPRAWFGR 776

Query: 3485 FTLAMRKYGFKQSNSDHTLFLKKRNGLVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFE 3664
            FT  M+K G++QSNSDHTLFLK R G VT LIIYVDDM++TGDD EE+ +L+  L  EFE
Sbjct: 777  FTKFMKKIGYRQSNSDHTLFLKHRCGKVTALIIYVDDMVVTGDDIEEIQRLQGQLSSEFE 836

Query: 3665 MKDLGRLKYFLGIEVMRSRQGIFICQKKYILDLLAETGMIDCKPMGTPMLPNQKLYMEEN 3844
            MKDLG LKYFLGIEV R +  I + Q+KY+LDLLAETGM+DCKP+ TP+  N +L    +
Sbjct: 837  MKDLGNLKYFLGIEVARGKDCIVLSQRKYVLDLLAETGMLDCKPVATPIEQNHQLAEYLD 896

Query: 3845 AKLADKGKYQRIVGKLIYLSHTRPDIAYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPG 4024
                +KG+YQR+VG+LIYLSHTRPD+AYAV VVSQFMH P   HM AV+RI++YLK  PG
Sbjct: 897  QVPTNKGRYQRLVGRLIYLSHTRPDLAYAVSVVSQFMHNPSEAHMDAVFRILQYLKSAPG 956

Query: 4025 HGVLFKTNGHLETHVYTDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEA 4204
             G++F    HL+   YTDADWAG+  +RRSTSGYFT +GGNLVTW+SKKQKVVA SSAEA
Sbjct: 957  KGLIFSKYSHLDVSGYTDADWAGNITDRRSTSGYFTFLGGNLVTWKSKKQKVVARSSAEA 1016

Query: 4205 EFRGIARGLAEILWVRKLLTEIGYSPTQSSKILCDNKAAIQISENPVQHDRTKHIEVDRH 4384
            E+RG+ RGL E+LW+R LL ++G+   ++  + CDNKAAI+I+ NPVQHDRTKH+EVDRH
Sbjct: 1017 EYRGMGRGLCEMLWLRNLLNDLGFRQKKAMSLYCDNKAAIEIAHNPVQHDRTKHVEVDRH 1076

Query: 4385 FIKEKLEAGIIELPFVRSENQLADILTKAVSEKIFNHCLGKLSIEN 4522
            FIKEKL+  II  PFV +E QLADILTKA+S K F   L KL I +
Sbjct: 1077 FIKEKLDGQIILFPFVPTEEQLADILTKALSTKAFYDSLDKLGIRD 1122


>gb|PNX92788.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1503

 Score = 1072 bits (2772), Expect = 0.0
 Identities = 556/1141 (48%), Positives = 738/1141 (64%), Gaps = 53/1141 (4%)
 Frame = +2

Query: 1253 SEKQDKQWLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKL 1432
            S   +  W+ D GATD MT+D           +  + TA+G    V   G++ ++ TL L
Sbjct: 357  SHVSNSAWIIDSGATDHMTFDSRHVLPLKPSSKKFVSTANGTSAPVIGKGSLPLNDTLNL 416

Query: 1433 SNCLYVPSLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVD-- 1606
             + L VP+L + LLS+S +T  L C V+  P +C+ +DI+T   IG GT R  LYY+D  
Sbjct: 417  DSVLVVPTLDYNLLSVSQITTALFCVVIFWPEYCVFKDIQTRKTIGCGTRRGALYYLDLE 476

Query: 1607 -----EVTQQGTVMLAHGTTRRE-AWLWHRRLGHPSTRYLHLLFPKLFPSN--KPINCET 1762
                 ++ Q  T+    G+ ++   WLWHRRLGH S  YL  LFP LF +       C+ 
Sbjct: 477  SKSSDKLRQALTINSYEGSKKKSNIWLWHRRLGHASFGYLKKLFPSLFVTVDVSSFQCDV 536

Query: 1763 CVLAKSHRSTFKPNNTKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFL 1942
            C LAKSHR++F     K   PF +IHSD+WGP+ V      R+F+ F+DDCTRMTW+  +
Sbjct: 537  CELAKSHRASFPLILNKSPIPFMVIHSDVWGPSKVSSLGGSRWFVTFIDDCTRMTWVCLM 596

Query: 1943 RHKSEVFEKFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTP 2122
            + KSEV   F  FY MI TQ+   +Q+LRSDNG E++++  +Q+ +  G++HQT+C+YTP
Sbjct: 597  KSKSEVSFLFKKFYKMICTQYNAQVQVLRSDNGGEYLSSEFQQYLETHGIVHQTTCSYTP 656

Query: 2123 EQNGVVERKNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLS 2302
            +QNGV ERKNR LLE+ RALLI++ +P S+W EA+ +A YLINR+P+  + F+TP QTL 
Sbjct: 657  QQNGVAERKNRHLLEVVRALLIEAHMPLSYWGEALTSAAYLINRVPSSTIDFRTPSQTLI 716

Query: 2303 EFTKIPPTLTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRH 2482
            E    P    L PRVFGC  FVH+ K + +KL P A +CVF+GY  ++KGYRCY+P  + 
Sbjct: 717  EAVVSPVVPNLPPRVFGCVAFVHLHKHQSNKLTPRALRCVFVGYAAHKKGYRCYHPPTQK 776

Query: 2483 MFTTMNCDFLETQYFYTKHTGQGDKDYDTLSWLKWMPSSEEVNHSTQDESPQPFTQ--FE 2656
            +F T++  F E   +++      ++  D +  L +   + E    T++  P    +   E
Sbjct: 777  IFVTIDVIFHEGSMYFSSEPKHQEEYQDDVLTLDYDACTSEERKLTREREPFKHGEELVE 836

Query: 2657 DPNISATQDAPPNLTSKVSNSQTQECDNSSDSVTNYEEHEHVETIELL----EDESEQE- 2821
              + + T D   +++   ++ +T E      S  N    E   + E L    +D SE + 
Sbjct: 837  HDHDNDTSDNNQDMSELDTSGETLERSGDEHSENNQNMSELDTSGETLQRSGDDHSENDA 896

Query: 2822 --------SPP-------------------------VEPDRYVLPPRSNRGVPPKRYSPE 2902
                    +PP                          EP R  LPPR  RG+P   Y PE
Sbjct: 897  EQTGTTILTPPPFDVLVPQATDLPNQSIVEDVPNLDYEPSRKQLPPRRTRGIPKPTYEPE 956

Query: 2903 KEARNSRYPMA-NVAAGNLSPEAKAFATSLCSEEIPTTVEQALESKEWREAMEVEMDALN 3079
              +   +YPM+  V+   LS   ++F   L    IP  V++AL    W++AM  EM +L 
Sbjct: 957  L-SNKVKYPMSCYVSNHRLSKLNQSFVNQLSIVSIPNNVQEALADPRWKDAMNEEMKSLM 1015

Query: 3080 KNDTWERCTLPPGKKPVGCRWVFTIKYKPDGTIERYKARLVAKGYTQTYGIDYSETFSPV 3259
            +N TWE    P GKKPVGCRWV+T+KY+ DG IER+KARLVAKGYTQTYGIDY+ETF+PV
Sbjct: 1016 ENKTWELVECPSGKKPVGCRWVYTVKYQADGQIERFKARLVAKGYTQTYGIDYTETFAPV 1075

Query: 3260 AKIDTIRVLFSIAANKEWPLLQFDVKNAFLHGELKEEVYMEVPPG-LMKDPNTREVCRLK 3436
            AKI+T+RVL S+AAN +WPL QFDVKNAFLHG+L EEVYM++PPG  + + +  +VCRLK
Sbjct: 1076 AKINTVRVLLSLAANLDWPLQQFDVKNAFLHGDLFEEVYMDLPPGCAIPETHRNKVCRLK 1135

Query: 3437 KSLYGLKQSPRAWFGRFTLAMRKYGFKQSNSDHTLFLKKRNGLVTCLIIYVDDMIITGDD 3616
            KSLYGLKQSPRAWFGRFT +M+ +G+ QSN+DHTLFLKK++G +T LI+YVDDM++TG+D
Sbjct: 1136 KSLYGLKQSPRAWFGRFTKSMKNFGYCQSNADHTLFLKKQHGKITALIVYVDDMVVTGND 1195

Query: 3617 KEEMSKLKVNLFREFEMKDLGRLKYFLGIEVMRSRQGIFICQKKYILDLLAETGMIDCKP 3796
              E   L+  L +EFEMKDLG LKYFLGIEV RS +GIF+CQ+KY LDLL ETGM  C+P
Sbjct: 1196 PVERKALQSYLSKEFEMKDLGPLKYFLGIEVSRSNKGIFLCQRKYTLDLLQETGMSACQP 1255

Query: 3797 MGTPMLPNQKLYMEENAKLADKGKYQRIVGKLIYLSHTRPDIAYAVGVVSQFMHQPQVTH 3976
            +  P+    KL +E N   ADK +YQR+VG+L+YL+HTRPD+AYA+ VVSQFMH P   H
Sbjct: 1256 VDVPIKEGLKLCVEPNQVPADKVRYQRLVGRLMYLAHTRPDLAYALSVVSQFMHNPGEQH 1315

Query: 3977 MKAVWRIIRYLKGTPGHGVLF-KTNGHLETHVYTDADWAGDKGNRRSTSGYFTLVGGNLV 4153
            M AV  I+RYLK  PG G+LF K   H     YTDADWAG   +RRSTSGYFT VGGNLV
Sbjct: 1316 MNAVMHILRYLKSAPGKGILFHKNEDHQRVDAYTDADWAGAVDDRRSTSGYFTFVGGNLV 1375

Query: 4154 TWRSKKQKVVALSSAEAEFRGIARGLAEILWVRKLLTEIGYSPTQSSKILCDNKAAIQIS 4333
            TWRSKKQ VVA SSAEAEFRG+A  + E LW++ L+ ++GY P Q  ++ CDNKAA  I+
Sbjct: 1376 TWRSKKQNVVARSSAEAEFRGMALAVCETLWLKLLMIDLGYPPNQPIRVYCDNKAACDIA 1435

Query: 4334 ENPVQHDRTKHIEVDRHFIKEKLEAGIIELPFVRSENQLADILTKAVSEKIFNHCLGKLS 4513
             NPVQHDRTKH+EVDR FIKEKL+  ++ELP +RSE+QLADILTKAVS ++F+  L KL 
Sbjct: 1436 HNPVQHDRTKHVEVDRFFIKEKLDEKVLELPKIRSEDQLADILTKAVSSRVFSKFLNKLG 1495

Query: 4514 I 4516
            +
Sbjct: 1496 M 1496


>emb|CAN60930.1| hypothetical protein VITISV_012765 [Vitis vinifera]
          Length = 1201

 Score = 1066 bits (2757), Expect = 0.0
 Identities = 550/1108 (49%), Positives = 730/1108 (65%), Gaps = 18/1108 (1%)
 Frame = +2

Query: 1247 TWSEKQDKQWLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTL 1426
            T++   +  W+ D GATD MT+D    S      +  + TA+G    V    ++ ++ TL
Sbjct: 121  TFTPVINSAWIIDSGATDHMTFDSRQVSPLRPSSQKIVSTANGNTTPVIGEXSLTLTDTL 180

Query: 1427 KLSNCLYVPSLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVD 1606
             L + L VPSL + LLS+S +T  L+C V+  P FC+++DI+T   IG G +R  LYY+D
Sbjct: 181  NLDSVLVVPSLDYNLLSVSQITAALSCIVIFWPEFCVIKDIQTRQTIGCGIKRGKLYYLD 240

Query: 1607 EVTQQGT----VMLAHGTT----RREAWLWHRRLGHPSTRYLHLLFPKLFPSN--KPINC 1756
              ++        + A G+     + E WLWHRRL H S  YL  LFP  F  +      C
Sbjct: 241  LQSKDSNKLQQALXADGSEGEKKKSEIWLWHRRLXHASFGYLKKLFPSXFAKSDISGFRC 300

Query: 1757 ETCVLAKSHRSTFKPNNTKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIY 1936
            + C LAKSH  +F     K   PF +IHSD+WGP+ V      R+F+ F+DDCTRMTW+ 
Sbjct: 301  DICELAKSHXVSFPLILNKSPFPFMVIHSDVWGPSKVPTLSGSRWFVTFIDDCTRMTWLC 360

Query: 1937 FLRHKSEVFEKFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAY 2116
             ++ K EV   F  F+ MI+TQ+   +++LRSDNG E+ ++ ++++ +   +IHQT+C+ 
Sbjct: 361  LMKTKDEVNLLFQXFHKMIETQYNAKVRVLRSDNGGEYQSSDLQKYLEGXDIIHQTTCSN 420

Query: 2117 TPEQNGVVERKNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQT 2296
            TP+QNGV ERKNR LLE+ RA LI ++ P S+W EA+ +A YLINR+P+ ++ F+TPLQ 
Sbjct: 421  TPQQNGVAERKNRHLLEVVRASLIAAKTPISYWGEAITSAAYLINRVPSSSINFQTPLQA 480

Query: 2297 LSEFTKIPPTLTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNR 2476
            L+     P    L PRVFGC  FVH+ K +R KL   A +CVF+GY +++KGYRCY+P  
Sbjct: 481  LTNVVVAPTVPNLPPRVFGCVAFVHLHKHQRTKLTSHALQCVFVGYALHKKGYRCYHPPT 540

Query: 2477 RHMFTTMNCDFLETQYFYTKHT---GQGDKDYDTLSWLKWMPSSEEVNHSTQDESPQPFT 2647
            R M+ TM+  F E   +++  +   G+  K+  TL +        + + S ++ES Q   
Sbjct: 541  RQMYITMDVVFHEDSMYFSSESELQGEYHKEIQTLDY--------DYHISKENESGQ--- 589

Query: 2648 QFEDPNISATQDAPPNLTSKVSNSQTQECDNSSDSVTNYEEHEHVETIELLEDESEQESP 2827
                              S++ N +  E D S     + +    +      +  S +   
Sbjct: 590  ------------------SELVNQEAGELDMSGQQFGSEDVFTEIPN----QSSSVEGVL 627

Query: 2828 PVEPDRYV--LPPRSNRGVPPKRYSPEKEARNSRYPMANVAAGN-LSPEAKAFATSLCSE 2998
             +EPD ++  LP R NRG+P   Y PE   +  +YPM+N  + + LS   K+F   L + 
Sbjct: 628  NLEPDXFMKRLPHRHNRGIPKPTYEPELSTK-VKYPMSNYVSNHRLSESNKSFVNQLSTV 686

Query: 2999 EIPTTVEQALESKEWREAMEVEMDALNKNDTWERCTLPPGKKPVGCRWVFTIKYKPDGTI 3178
             IP +V++AL    W+  M  EM +L KN+TWE    PPGKKPVGCRW++T+KYK DG I
Sbjct: 687  AIPNSVQEALADXRWKAXMNEEMKSLQKNETWELVECPPGKKPVGCRWIYTVKYKADGXI 746

Query: 3179 ERYKARLVAKGYTQTYGIDYSETFSPVAKIDTIRVLFSIAANKEWPLLQFDVKNAFLHGE 3358
            ER+KARLVAKGYTQTYGIDY+ TF+PVAKI+T+RVL S+AAN +WPL QFDVKN FLHGE
Sbjct: 747  ERFKARLVAKGYTQTYGIDYTXTFAPVAKINTVRVLLSLAANLDWPLQQFDVKNXFLHGE 806

Query: 3359 LKEEVYMEVPPGLM-KDPNTREVCRLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNSDH 3535
            L EEVYM++PPG M  +   ++VC+LKKSLYGLKQSPRAWFGRFT +MR +G++QSNSDH
Sbjct: 807  LSEEVYMDLPPGCMVSEKQCQKVCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDH 866

Query: 3536 TLFLKKRNGLVTCLIIYVDDMIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFLGIEVMR 3715
            TLFLKK++G +T LI+YVDDM++TG+D EE   L+  L REFEMKDLG LKYFLGIEV R
Sbjct: 867  TLFLKKQHGKITALIVYVDDMVVTGNDPEERKALQNYLSREFEMKDLGPLKYFLGIEVSR 926

Query: 3716 SRQGIFICQKKYILDLLAETGMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQRIVGKLI 3895
            S +GIF+ Q+KY LDLL ETGM  C+P+ TP+    KL +E N    DKG+YQR+VG+L+
Sbjct: 927  SSEGIFLSQRKYALDLLQETGMSGCQPVNTPIEEGLKLCVEPNQVSTDKGRYQRLVGRLM 986

Query: 3896 YLSHTRPDIAYAVGVVSQFMHQPQVTHMKAVWRIIRYLKGTPGHGVLFKTN-GHLETHVY 4072
            YL+HTRPD+AYA+ VVSQ+MH P   HM AV RI+RYLK  PG G+LF  N  H    VY
Sbjct: 987  YLAHTRPDLAYALSVVSQYMHNPGEQHMNAVMRILRYLKNAPGKGILFAKNVNHQSIEVY 1046

Query: 4073 TDADWAGDKGNRRSTSGYFTLVGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAEILWVR 4252
            TDADW G   +RRSTSGYFT VGGNLVTW+SKKQ VVA SSAEAEFRG+A GL E LW+R
Sbjct: 1047 TDADWXGAVDDRRSTSGYFTFVGGNLVTWKSKKQNVVARSSAEAEFRGMALGLCEALWLR 1106

Query: 4253 KLLTEIGYSPTQSSKILCDNKAAIQISENPVQHDRTKHIEVDRHFIKEKLEAGIIELPFV 4432
             LL ++GY   Q  ++ CDNKAA  I+ N VQHDRTKH+EVDR FIKEKL+  I+ELP +
Sbjct: 1107 LLLXDLGYLSRQPIRLFCDNKAACDIAHNXVQHDRTKHVEVDRFFIKEKLDDKIVELPKI 1166

Query: 4433 RSENQLADILTKAVSEKIFNHCLGKLSI 4516
            RSE+QLADILTKAVS ++F+  L KL +
Sbjct: 1167 RSEDQLADILTKAVSSQVFSKFLDKLGM 1194


>gb|PRQ37607.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1149

 Score = 1048 bits (2710), Expect = 0.0
 Identities = 558/1147 (48%), Positives = 743/1147 (64%), Gaps = 66/1147 (5%)
 Frame = +2

Query: 1274 WLFDCGATDTMTYDLSDFSSFSNPRRNHIQTASGEIVDVKRGGTIEISPTLKLSNCLYVP 1453
            W+ D GA+D MT D S   +     +N + TA G    V   G+I +S TL L + L VP
Sbjct: 11   WIIDTGASDHMTNDPSLVKNLRRSSQNIVSTADGTPTPVTGEGSIVVSDTLTLESVLVVP 70

Query: 1454 SLSHKLLSISHVTKELNCTVLMHPTFCILQDIRTGVIIGRGTERQGLYYVD--------- 1606
            SL++ LLS+  +   L C V  +P+FC+ QDI T  I+G G  R  LYY+D         
Sbjct: 71   SLAYNLLSVGQIILALACIVTFYPSFCVFQDILTRRILGYGVRRGKLYYLDLTETGENHK 130

Query: 1607 EVTQQGTVMLAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLFP--SNKPINCETCVLAKS 1780
             +  Q   +      +   WLWHRRLGH S  YL  L P LF   S+   +C+ C LAKS
Sbjct: 131  HLLGQANQINGVENAKEAVWLWHRRLGHLSFSYLKKLQPHLFSVVSDLDFHCDICELAKS 190

Query: 1781 HRSTFKPNNTKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFLRHKSEV 1960
            HR ++ P+  K   PF  IHSD+WGPA +      RYF+ F+DDCTRMTW+ FL++KS+V
Sbjct: 191  HRISYSPSLHKSPVPFMKIHSDVWGPAKIPSLSGARYFVTFIDDCTRMTWVSFLKNKSDV 250

Query: 1961 FEKFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTPEQNGVV 2140
            F  F  F+ M+ TQ+ +SI++ +SDNG EFVN  M +F +  G+ HQTS +YTP+QNG+ 
Sbjct: 251  FGMFIEFHKMVATQYLQSIRVFQSDNGGEFVNGPMIEFCRSHGIRHQTSNSYTPQQNGLA 310

Query: 2141 ERKNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKFKTPLQTLSEFTKIP 2320
            ERKNR L+E+ RA L    VP+S+W EAV +A YLINR P+  ++F+ P Q L  F  IP
Sbjct: 311  ERKNRQLMEVVRASLFGMNVPRSYWGEAVKSAAYLINRTPSRVIEFQNPHQKLHTFLTIP 370

Query: 2321 PTLTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGYRCYNPNRRHMFTTMN 2500
                L+PRVFGC+ +VHIPK +R+KL P A KC+F+GY   QKGYRCY+P    +  +++
Sbjct: 371  SMPNLEPRVFGCTAYVHIPKPQRNKLDPRARKCIFVGYADFQKGYRCYDPLTGTLHVSLD 430

Query: 2501 CDFLETQYFY----TKHTGQGDK----------DYDTLSWLKWMPSSEEVNHSTQDE--- 2629
              F E++ +Y    ++ + QG++          D+D    L+ +  + E   + + E   
Sbjct: 431  VAFRESEPYYSGGASQSSLQGERGCEGNPRSIIDFDVFKDLENLEDTFEGRKNLETENAV 490

Query: 2630 SPQPFTQFEDPNISATQDAPPNLT------SKVSNSQTQECDNSSDSVTNYEEHE--HVE 2785
            + Q     E  N +A +    + T        V NS+T+    +  SV N E  E   ++
Sbjct: 491  AEQSIVNSEIDNATAERSVANSETENATAEQSVVNSETENV-TAEQSVVNSETEETTFLD 549

Query: 2786 TIELLEDESE-----------------QESPPVEPDRY--------VLPPRSNR---GVP 2881
            ++   +D SE                 Q  PP  P  +        V P +S R   G+P
Sbjct: 550  SLNQNQDVSEAHTQDIPPSTSPTEDPGQNDPPQVPLNFNESSGLESVEPRKSQRVAKGIP 609

Query: 2882 PKRYSPEKEARNSRYPMANVAAGN-LSPEAKAFATSLCSEEIPTTVEQALESKEWREAME 3058
             K+Y P+ +A+ ++YP+AN  + + +S         L +  IP+ V+ AL + +W +AM 
Sbjct: 610  KKQYEPDIKAK-AKYPIANFMSNHRISGSHALVIDQLSTVSIPSNVQDALTNPKWTKAMN 668

Query: 3059 VEMDALNKNDTWERCTLPPGKKPVGCRWVFTIKYKPDGTIERYKARLVAKGYTQTYGIDY 3238
             E++AL KN TWE   +P GKK VGCRWVFT+K   DGTI RYKARLVAKGYTQ YGIDY
Sbjct: 669  EELEALQKNATWELVPMPVGKKTVGCRWVFTVKLNADGTINRYKARLVAKGYTQRYGIDY 728

Query: 3239 SETFSPVAKIDTIRVLFSIAANKEWPLLQFDVKNAFLHGELKEEVYMEVPPGLMKDPN-T 3415
             ETF+PVAKI+T+R+L S+AANK+WPL QFDVKNAFL+G L+EEVYM+VPPG+   P+  
Sbjct: 729  EETFAPVAKINTVRILISLAANKDWPLHQFDVKNAFLNGNLEEEVYMDVPPGVKNYPSEV 788

Query: 3416 REVCRLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNSDHTLFLKKRNGLVTCLIIYVDD 3595
             +VC+LKKSLYGLKQSPRAWFGRF+ +MR +G++QSNSDHTLF+K++NG +T LI+YVDD
Sbjct: 789  GKVCKLKKSLYGLKQSPRAWFGRFSKSMRAFGYRQSNSDHTLFIKRKNGKITALIVYVDD 848

Query: 3596 MIITGDDKEEMSKLKVNLFREFEMKDLGRLKYFLGIEVMRSRQGIFICQKKYILDLLAET 3775
            MI+TGDD +EM++L+  L +EFEMKDLG+LKYFLGIEV RS++GI + Q+KY+LDLL ET
Sbjct: 849  MIVTGDDPKEMNELQKYLSKEFEMKDLGQLKYFLGIEVARSKKGISLSQRKYVLDLLTET 908

Query: 3776 GMIDCKPMGTPMLPNQKLYMEENAKLADKGKYQRIVGKLIYLSHTRPDIAYAVGVVSQFM 3955
            GM+DC P+ TP+  N +L +  +    DKG+YQR+VG+LIYLSHTRPDIAYA  +  QF 
Sbjct: 909  GMLDCSPIETPIEMNHRLAIYPDQIPTDKGRYQRLVGRLIYLSHTRPDIAYA-NIWMQF- 966

Query: 3956 HQPQVTHMKAVWRIIRYLKGTPGHGVLFKTNGHLETHVYTDADWAGDKGNRRSTSGYFTL 4135
                       +RI+RYLK  PG G+LF+    LE   YT ADWAGDK +RRSTSGYFT 
Sbjct: 967  -----------FRILRYLKMAPGKGLLFEKKDELEVGGYTYADWAGDKTDRRSTSGYFTF 1015

Query: 4136 VGGNLVTWRSKKQKVVALSSAEAEFRGIARGLAEILWVRKLLTEIGYSPTQSSKILCDNK 4315
            VGGNLVTWRSKKQKVVA SSAEAEFRG+A G+ E+LW+R +L ++GY   Q   + CDNK
Sbjct: 1016 VGGNLVTWRSKKQKVVARSSAEAEFRGMAHGVCEMLWIRNVLKDLGYKLRQPMDLHCDNK 1075

Query: 4316 AAIQISENPVQHDRTKHIEVDRHFIKEKLEAGIIELPFVRSENQLADILTKAVSEKIFNH 4495
            AAI+I+ NPVQHDRTKH+EVDRHFIKE L+  +I  PFV S+ QLAD+LTK V  KIF+ 
Sbjct: 1076 AAIEIAHNPVQHDRTKHVEVDRHFIKENLDRKVIRFPFVNSKEQLADVLTKGVCRKIFDS 1135

Query: 4496 CLGKLSI 4516
             + KL +
Sbjct: 1136 SVDKLGM 1142


>gb|PRQ60115.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1014

 Score = 1037 bits (2682), Expect = 0.0
 Identities = 528/1025 (51%), Positives = 694/1025 (67%), Gaps = 47/1025 (4%)
 Frame = +2

Query: 1589 GLYYVDEVTQQGTVMLAHGTTRREAWLWHRRLGHPSTRYLHLLFPKLFPSNKP--INCET 1762
            G + V EV Q   +     T   + WLWH+RLGHPS  YL  LFP LF  NKP    C+T
Sbjct: 7    GNHRVSEVHQ---IQKGTSTNEEQIWLWHKRLGHPSFGYLQTLFPLLFQHNKPSAFKCDT 63

Query: 1763 CVLAKSHRSTFKPNNTKVESPFSLIHSDIWGPAPVIGGQNFRYFLLFVDDCTRMTWIYFL 1942
            C+L KSHR ++  ++TK  +PF L+HSD+WGP P       ++F+LFVDDCTRM+WIY L
Sbjct: 64   CILGKSHRVSYPLSSTKSIAPFDLVHSDVWGPCPPTPS-GMKWFVLFVDDCTRMSWIYLL 122

Query: 1943 RHKSEVFEKFTWFYAMIQTQFKKSIQILRSDNGSEFVNNSMKQFFQEKGMIHQTSCAYTP 2122
            ++KS+VF  F  F+AMI+TQF+  I++LRSDNG E+VN+   Q+    G+IHQT+C  TP
Sbjct: 123  KNKSDVFPVFQTFHAMIRTQFQTPIKVLRSDNGGEYVNHLFHQYLATHGIIHQTTCPQTP 182

Query: 2123 EQNGVVERKNRILLEITRALLIDSQVPKSFWPEAVATATYLINRLPTHALKF-------- 2278
            +QNGV ERKNR +LE+ R++LI + +P+SFW +A+ T  YLINRLPT AL+         
Sbjct: 183  QQNGVAERKNRHILEVARSMLIGAHMPESFWGDAILTTVYLINRLPTQALQSTSKETSPP 242

Query: 2279 -KTPLQTLSEFTKIPPTLTLKPRVFGCSVFVHIPKTERDKLGPCAEKCVFLGYGVNQKGY 2455
             +TP+Q L+    +PPT  L P++FGC  +VHI + +R KL  CAEKC+F+GY   QKGY
Sbjct: 243  PQTPIQALASHLPLPPTHALDPKIFGCVAYVHIHRNQRTKLDACAEKCIFIGYASTQKGY 302

Query: 2456 RCYNPNRRHMFTTMNCDFLETQ-YFYTKHTGQGDKD------------------------ 2560
            RCY+P  +  + +M+  F E   +F  K T QG+ D                        
Sbjct: 303  RCYSPTTKRTYVSMDVTFHEHDLHFSPKATLQGENDIEEEQSSGDCLCPPLEPMDIQEHG 362

Query: 2561 --------YDTLSWLKWMPSSE-EVNHSTQDESPQPFTQ-FEDPNISATQDAPPNLTSKV 2710
                    +        +P+SE  V H  Q  +P+   +    P+ + +    P    +V
Sbjct: 363  NTGEIRIEHGNTERSNQLPTSEMAVEHGNQLPTPESAVRDISSPSTTPSTPMLPEDDPEV 422

Query: 2711 SNSQTQECDNSSDSVTNYEEHEHVETIELLEDESEQESPPVEPDRYVLPPRSNRGVPPKR 2890
             N+   EC ++ +S+ N E    +E+ +++               + LP R NRG P  +
Sbjct: 423  INNHVFECHDNVNSMPNTE----IESSDII-------------GVHKLPFRKNRGQPKVQ 465

Query: 2891 YSPEKEARNSRYPMAN-VAAGNLSPEAKAFATSLCSEEIPTTVEQALESKEWREAMEVEM 3067
            Y P+ +A+ ++YP++N +++  LS    +F   L +  IP  V+ AL + +W +AME EM
Sbjct: 466  YEPDPKAK-AKYPISNYMSSHRLSKSYASFVFHLSAIIIPNKVQDALANPKWTKAMEDEM 524

Query: 3068 DALNKNDTWERCTLPPGKKPVGCRWVFTIKYKPDGTIERYKARLVAKGYTQTYGIDYSET 3247
            +AL KNDTWE    P GK+ VGCRW++T+KY  DGT++RYKARLVAKGYTQTYGIDY ET
Sbjct: 525  EALQKNDTWELVPKPAGKRAVGCRWIYTLKYAADGTLDRYKARLVAKGYTQTYGIDYQET 584

Query: 3248 FSPVAKIDTIRVLFSIAANKEWPLLQFDVKNAFLHGELKEEVYMEVPPGLMKDPNTREVC 3427
            F+PVAK++T+RVL S+AAN +WPL QFDVKNAFLHG+LKEEVYM++PPG         VC
Sbjct: 585  FAPVAKMNTVRVLLSLAANLDWPLKQFDVKNAFLHGDLKEEVYMDLPPGYSLPSQAGMVC 644

Query: 3428 RLKKSLYGLKQSPRAWFGRFTLAMRKYGFKQSNSDHTLFLKKRNGLVTCLIIYVDDMIIT 3607
            +LKKSLYGLKQSPRAWFGRF+ +M+++G+KQSNSDHTLFLK R   +T LIIYVDDMI+T
Sbjct: 645  KLKKSLYGLKQSPRAWFGRFSQSMKQFGYKQSNSDHTLFLKHRKDKLTALIIYVDDMIVT 704

Query: 3608 GDDKEEMSKLKVNLFREFEMKDLGRLKYFLGIEVMRSRQGIFICQKKYILDLLAETGMID 3787
            G+D EE+ KL+ +L   FEMKDLG LKYFLGIEV RS++GI + Q+KY++DLL ETG++ 
Sbjct: 705  GNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVARSKEGIALSQRKYVVDLLIETGLLA 764

Query: 3788 CKPMGTPMLPNQKLYMEENAKLADKGKYQRIVGKLIYLSHTRPDIAYAVGVVSQFMHQPQ 3967
            C+P  TPM  N KL    +    +K +YQR+VGKLIYLSHTRPDIAYAV VVSQFMH P 
Sbjct: 765  CRPADTPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYLSHTRPDIAYAVSVVSQFMHAPS 824

Query: 3968 VTHMKAVWRIIRYLKGTPGHGVLFKTNGHLETHVYTDADWAGDKGNRRSTSGYFTLVGGN 4147
              HM+AV RI+RYLK  PG G++F  N H +   YTDADWAG   +RRSTSGYFT VGGN
Sbjct: 825  EDHMEAVHRILRYLKTNPGKGIMFSKNNHTDIAGYTDADWAGSITDRRSTSGYFTFVGGN 884

Query: 4148 LVTWRSKKQKVVALSSAEAEFRGIARGLAEILWVRKLLTEIGYSPTQSSKILCDNKAAIQ 4327
            LVTWRSKKQKVVA SSAEAE+RG+A G+ E+LW+R L+ ++G+ P  +  + CDNKAAI 
Sbjct: 885  LVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRHLMKDLGFKPKYAMNLYCDNKAAID 944

Query: 4328 ISENPVQHDRTKHIEVDRHFIKEKLEAGIIELPFVRSENQLADILTKAVSEKIFNHCLGK 4507
            I+ NPVQHDRTKH+EVDRHFIKEKLE+  I +P VR+E+QLADILTKAVS K+F+  L K
Sbjct: 945  IAHNPVQHDRTKHVEVDRHFIKEKLESETINMPHVRTEDQLADILTKAVSGKVFHSSLDK 1004

Query: 4508 LSIEN 4522
            L + +
Sbjct: 1005 LGMRD 1009