BLASTX nr result

ID: Chrysanthemum21_contig00020896 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00020896
         (494 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVE12558.1| hypothetical protein Ccrd_024060 [Cynara carduncu...   131   2e-34
ref|XP_023760807.1| ubiquitin carboxyl-terminal hydrolase 23 [La...    86   2e-16
ref|XP_021990099.1| ubiquitin carboxyl-terminal hydrolase 23 [He...    65   4e-09

>gb|KVE12558.1| hypothetical protein Ccrd_024060 [Cynara cardunculus var. scolymus]
          Length = 303

 Score =  131 bits (330), Expect = 2e-34
 Identities = 83/165 (50%), Positives = 99/165 (60%), Gaps = 12/165 (7%)
 Frame = +1

Query: 10  KETQMNTTSSNGLPNGHNSSATVGTLSNGLANGALEQTVKKEGLVPKSISETILESSSNS 189
           KE Q+NT+ SNG  NGH SSATVGT+ NG +  A EQ  KKEG VPKSISE+  ESS   
Sbjct: 32  KEAQINTSFSNGSLNGHKSSATVGTMRNGFSVAAPEQIQKKEGSVPKSISESHSESSQKC 91

Query: 190 KNEDIS---------AQP-AIPEDAASKTEKN--VKENGGGESFVGNSSSDGQKVVVAAT 333
           KN D S         ++P A   D  SK EK    KE GG ESF  N   DGQ+ VV A+
Sbjct: 92  KNGDFSIPISTMVSCSKPLATLGDNTSKMEKGDPAKEIGGNESFGANGRGDGQEGVVIAS 151

Query: 334 TDIVELLKVDGSSVMKALRGKPHKKVKNHLRCKAISMKVSSKILM 468
            +I +L K+  S   +AL  K HKK KN L+CK +SMK SS + M
Sbjct: 152 AEISDLPKMGSSMEKEALGWKKHKKSKNVLKCKVLSMKFSSNVFM 196


>ref|XP_023760807.1| ubiquitin carboxyl-terminal hydrolase 23 [Lactuca sativa]
 gb|PLY87749.1| hypothetical protein LSAT_5X91020 [Lactuca sativa]
          Length = 858

 Score = 86.3 bits (212), Expect = 2e-16
 Identities = 75/183 (40%), Positives = 91/183 (49%), Gaps = 26/183 (14%)
 Frame = +1

Query: 1   VESKETQMNTTSSNGLPNGHNSSATVGTLSNGLANGALEQTVKKEGLVPKSISETILESS 180
           +  KETQMN   SNG      SS T          GA EQ  KKE LVPKS      ESS
Sbjct: 505 IVQKETQMNVILSNG------SSVT----------GATEQKAKKEDLVPKSS-----ESS 543

Query: 181 SNSKNEDISAQPAIPEDAASKTEKN--VKENGGGESFVG-NSSSDGQK--VVVAATTDIV 345
            NSKN D S       +A SKT+K   +KENG GE  VG NS  DG+K   +V  T D+ 
Sbjct: 544 VNSKNGDFSVPNVNLGNAESKTDKGETLKENGRGELVVGSNSGGDGEKGAAMVVDTPDLP 603

Query: 346 E--------------------LLKVDGSSVMKALRGKPHKKVKNHLRCKAI-SMKVSSKI 462
           +                    L ++   +  K +  KP+KKVKN L+CK I SMKVS+ +
Sbjct: 604 KMESLTNKEPHDQKVHKKAKNLPEMGSLTKKKDVDRKPNKKVKNFLKCKKIVSMKVSANV 663

Query: 463 LMG 471
           LMG
Sbjct: 664 LMG 666


>ref|XP_021990099.1| ubiquitin carboxyl-terminal hydrolase 23 [Helianthus annuus]
 gb|OTG12810.1| putative ubiquitin specific protease domain protein [Helianthus
            annuus]
          Length = 977

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 54/157 (34%), Positives = 70/157 (44%)
 Frame = +1

Query: 1    VESKETQMNTTSSNGLPNGHNSSATVGTLSNGLANGALEQTVKKEGLVPKSISETILESS 180
            V  KE QM T  S+G  N   S A VG   NGL   A  +T    GL   S+ +  + + 
Sbjct: 646  VSPKEAQMKTGPSDGSLNSQKSLAAVGNEGNGLGPVAPIETQTNSGLSNDSLHDRKISAV 705

Query: 181  SNSKNEDISAQPAIPEDAASKTEKNVKENGGGESFVGNSSSDGQKVVVAATTDIVELLKV 360
            + +     SA  + PE   +        NG   + V  S S+  K          E  K 
Sbjct: 706  AGTVINGFSAGASEPEQTQT--------NG---TSVPKSISEPSKT---------EDRKK 745

Query: 361  DGSSVMKALRGKPHKKVKNHLRCKAISMKVSSKILMG 471
            + S   KA+ GKP KK KN L+CK ISMK SS I +G
Sbjct: 746  ESSMENKAIVGKPRKKAKNFLKCKLISMKFSSNIRLG 782


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