BLASTX nr result

ID: Chrysanthemum21_contig00020895 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00020895
         (391 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021990099.1| ubiquitin carboxyl-terminal hydrolase 23 [He...    91   1e-18
gb|KVH93639.1| Peptidase C19, ubiquitin carboxyl-terminal hydrol...    85   2e-16
ref|XP_023760807.1| ubiquitin carboxyl-terminal hydrolase 23 [La...    69   8e-11

>ref|XP_021990099.1| ubiquitin carboxyl-terminal hydrolase 23 [Helianthus annuus]
 gb|OTG12810.1| putative ubiquitin specific protease domain protein [Helianthus
           annuus]
          Length = 977

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 61/143 (42%), Positives = 70/143 (48%), Gaps = 36/143 (25%)
 Frame = +3

Query: 3   KVFEQKAYMLFYFKDRKNIPVKKTTDAAQQKEKIVMNGTPNGSSTPAEAQRKTN---GTV 173
           KVFEQKAYMLFYFKDRKN P KKT D    KEKIV+NG PNG     EAQ KT     ++
Sbjct: 402 KVFEQKAYMLFYFKDRKNYPSKKTRD-VHHKEKIVINGAPNGPGASREAQTKTGLSIPSL 460

Query: 174 NGQKSLSTV--------------------AQKETQMKTKFGSGLSNGHKS---------- 263
           N Q+SL                       A +E QMKT   +   N   S          
Sbjct: 461 NAQRSLKKTPDVAQQKENIVMNGTPNGPGAPREVQMKTGLSNPSLNAQMSSKRTADVAQQ 520

Query: 264 ---LAANSTVNGPDAQKEAQIKT 323
              +  N T NGP A +EAQ+KT
Sbjct: 521 KENIVMNGTPNGPGAPREAQMKT 543



 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 53/116 (45%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
 Frame = +3

Query: 63  VKKTTDAAQQKEKIVMNGTPNGSSTPAEAQRK---TNGTVNGQKSLSTV-------AQKE 212
           +KKT D AQ KE IVMNG PNG   P EAQ     TNG++N QKSL +V       A KE
Sbjct: 556 LKKTADVAQPKENIVMNGAPNGPGAPREAQTNTILTNGSLNEQKSLVSVNTLDCSGAPKE 615

Query: 213 TQMKTKFGSGLSNGHKSLAA---NSTVNGPDAQKEAQIKTXXXXXXXXXQKSFSPV 371
            QMKT       +  KSLAA        GP + KEAQ+KT         QKS + V
Sbjct: 616 AQMKTGPSDEACSVQKSLAAVGNEGNELGPVSPKEAQMKTGPSDGSLNSQKSLAAV 671


>gb|KVH93639.1| Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Cynara
           cardunculus var. scolymus]
          Length = 651

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 52/108 (48%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   KVFEQKAYMLFYFKDRKNIPVKKTTDAAQQKEKIVMNGTPNGSSTPAEAQRKTNGTVNGQ 182
           KVFEQKAYMLFYF+DRK+ P KK  D   QKEKIVMNGT NGSS                
Sbjct: 469 KVFEQKAYMLFYFRDRKSFPSKKPADVVHQKEKIVMNGTLNGSS---------------- 512

Query: 183 KSLSTVAQKETQMKTKFGSGLSNGHKSLA---ANSTVNGPDAQKEAQI 317
                 A+KETQM     +   N HKSLA   A     GP+  KE Q+
Sbjct: 513 ------ARKETQMNAGLSNRSLNAHKSLATVGAERNGFGPNVPKETQM 554


>ref|XP_023760807.1| ubiquitin carboxyl-terminal hydrolase 23 [Lactuca sativa]
 gb|PLY87749.1| hypothetical protein LSAT_5X91020 [Lactuca sativa]
          Length = 858

 Score = 68.6 bits (166), Expect = 8e-11
 Identities = 44/108 (40%), Positives = 55/108 (50%), Gaps = 26/108 (24%)
 Frame = +3

Query: 3   KVFEQKAYMLFYFKDRKNIPVKKTTDAAQQKEKIVMNG------------TPNGSSTPAE 146
           KVFEQKAYMLFYF+D+K+ P KKTTD   QKEKI MN               NG +   E
Sbjct: 414 KVFEQKAYMLFYFRDQKSFPSKKTTDVVHQKEKIPMNNGLSVSKETQKIPMSNGLNVSKE 473

Query: 147 AQR--KTNGT------------VNGQKSLSTVAQKETQMKTKFGSGLS 248
            Q+    NG+            V  +  +S++ QKETQM     +G S
Sbjct: 474 TQKIPMRNGSSVVPKDTPIPLNVPKETQISSIVQKETQMNVILSNGSS 521


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