BLASTX nr result

ID: Chrysanthemum21_contig00020789 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00020789
         (381 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH89501.1| protein of unknown function DUF1605 [Cynara cardu...    56   2e-06
ref|XP_022035359.1| probable pre-mRNA-splicing factor ATP-depend...    55   3e-06

>gb|KVH89501.1| protein of unknown function DUF1605 [Cynara cardunculus var.
           scolymus]
          Length = 430

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 23/26 (88%), Positives = 23/26 (88%)
 Frame = -1

Query: 381 ISIDPSWLREAAPHFYQQQPFNPNRH 304
           ISIDPSWLREAAPHFYQQQP NP  H
Sbjct: 405 ISIDPSWLREAAPHFYQQQPMNPTHH 430


>ref|XP_022035359.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
           [Helianthus annuus]
 gb|OTG28972.1| putative RNA helicase family protein [Helianthus annuus]
          Length = 695

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = -1

Query: 381 ISIDPSWLREAAPHFYQQQPFNPNRH 304
           ISI+PSWLREAAPHFYQQQP N NRH
Sbjct: 670 ISIEPSWLREAAPHFYQQQPMNANRH 695


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