BLASTX nr result

ID: Chrysanthemum21_contig00020761 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00020761
         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI01163.1| hypothetical protein Ccrd_020584 [Cynara carduncu...    98   5e-21
ref|XP_023756638.1| protein trichome birefringence-like 14 [Lact...    94   2e-19
ref|XP_023744355.1| protein trichome birefringence-like 16 [Lact...    58   7e-07

>gb|KVI01163.1| hypothetical protein Ccrd_020584 [Cynara cardunculus var. scolymus]
          Length = 575

 Score = 98.2 bits (243), Expect = 5e-21
 Identities = 69/129 (53%), Positives = 81/129 (62%), Gaps = 20/129 (15%)
 Frame = -3

Query: 335 SLFIAVVIVFSIVLVWYWEKAPLLTTLFPSHAQLLNLFPAGDVKVKQLATDLRQAQGVVN 156
           SLF   V++ +IV VWYWEK PLLTTL PSH Q+L LFPAG+VKVKQ+  DL +A GVVN
Sbjct: 18  SLFFIGVVLTTIV-VWYWEKTPLLTTLLPSHGQVLQLFPAGEVKVKQV-DDLTEADGVVN 75

Query: 155 -ISPPFS------NITSNKGVLDLVSPA----PPSFDI-----STTA----HENTTDNVK 36
            +SPP S      +I  N GV+D VSP      PS DI     S TA    HENTT  V 
Sbjct: 76  LVSPPSSRNKPPLDIRGN-GVVDSVSPLSSINTPSSDIRGDKYSMTAQEKHHENTTSRVG 134

Query: 35  QSVPSQVSE 9
           + V  +VSE
Sbjct: 135 KPVSGEVSE 143


>ref|XP_023756638.1| protein trichome birefringence-like 14 [Lactuca sativa]
 ref|XP_023756647.1| protein trichome birefringence-like 14 [Lactuca sativa]
 ref|XP_023756653.1| protein trichome birefringence-like 14 [Lactuca sativa]
 gb|PLY98943.1| hypothetical protein LSAT_7X35180 [Lactuca sativa]
          Length = 521

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 58/132 (43%), Positives = 85/132 (64%), Gaps = 23/132 (17%)
 Frame = -3

Query: 335 SLFIAVVIVFSIVLVWYWEKAPLLTTLFPSHAQLLNLFPAGDVKVK---QLATDLRQAQG 165
           SLF  + +VF+ ++VW WEK PLLTTL PSH+Q++ LFPAG VKVK   Q   D R+A+ 
Sbjct: 15  SLFF-IGVVFTTIVVWSWEKTPLLTTLLPSHSQVMQLFPAGGVKVKQGTQSKDDFREAEV 73

Query: 164 VVNISPPFSNITS-----NKGVLDLVSPA------PPSFDI-----STTA----HENTTD 45
           V N++ P S+I +      +G++DL+SP+       PS DI     S+T+    HE+TT+
Sbjct: 74  VPNVTYPISSINAPSILGEEGLVDLISPSTLSPINTPSLDIHGGESSSTSQENHHESTTN 133

Query: 44  NVKQSVPSQVSE 9
            +++ V S+VSE
Sbjct: 134 IIEKPVSSEVSE 145


>ref|XP_023744355.1| protein trichome birefringence-like 16 [Lactuca sativa]
 gb|PLY65736.1| hypothetical protein LSAT_5X139981 [Lactuca sativa]
          Length = 498

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
 Frame = -3

Query: 335 SLFIAVVIVFSIVLVWYWEKAPLLTTLFPSHAQLLNLFPAGDVK-----VKQLATDLRQA 171
           SLF  V +  SIV VW WEK P LTTL P H Q L++FP  ++K     V ++  D ++ 
Sbjct: 17  SLFFIVFVCASIV-VWNWEKTPRLTTLLPPHDQTLHIFP-DELKREREHVTEVKQDFKED 74

Query: 170 QGVVNISPPFSNITSNKGVLDLVSPAPPSFDISTTAHEN 54
           + VVNI PP  ++++N   L+         D S T HEN
Sbjct: 75  KPVVNILPP--SLSTNTASLNTRQ------DESPTTHEN 105


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