BLASTX nr result

ID: Chrysanthemum21_contig00020684 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00020684
         (370 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88052.1| Peptidase C19, ubiquitin carboxyl-terminal hydrol...   149   3e-39
ref|XP_022021178.1| ubiquitin carboxyl-terminal hydrolase 16-lik...    86   6e-17
gb|KVI06756.1| Peptidase C19, ubiquitin carboxyl-terminal hydrol...    78   3e-14

>gb|KVH88052.1| Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Cynara
           cardunculus var. scolymus]
          Length = 1015

 Score =  149 bits (376), Expect = 3e-39
 Identities = 78/120 (65%), Positives = 90/120 (75%)
 Frame = -1

Query: 361 PATLLSEDLHHKGDVGVESYARQHATSSTSEVNTPVSYEGHSNFSTPTKWPAGVTLESFE 182
           PA    E+ HHK DVGVES A +  T+STSE N P+SYEGHS FS PTK  AGVT E+ E
Sbjct: 175 PAERFPENSHHKDDVGVESLAHRQGTNSTSESNPPLSYEGHSLFSPPTKVSAGVTFENSE 234

Query: 181 TEKSAHQTVVSSARKSTVLGNNSRTKYNLTDEDTQSVTSSSSFWTADGSNESSLSEPATN 2
           T K A +T+VSSARKSTVLG N++    L+DED Q  TSSSSFWT DGSN+SSLSEP+TN
Sbjct: 235 TVKPAFRTLVSSARKSTVLGKNNKKISTLSDEDAQLGTSSSSFWTDDGSNQSSLSEPSTN 294


>ref|XP_022021178.1| ubiquitin carboxyl-terminal hydrolase 16-like [Helianthus annuus]
 gb|OTG34592.1| putative zinc finger, MYND-type, Ubiquitin specific protease domain
           protein [Helianthus annuus]
          Length = 1172

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 51/111 (45%), Positives = 66/111 (59%), Gaps = 22/111 (19%)
 Frame = -1

Query: 286 TSSTSEVNTPVSYEGHSNFSTPTKWPAGVTLESFETEKSAHQTVVSSARKSTVL------ 125
           T++ +E  +P+SYEG   FSTPT +  GVT E+ ET KSAH   +S ARKST L      
Sbjct: 169 TATPAEPKSPLSYEGPFVFSTPTNFSTGVTFENLETVKSAHGIPLSPARKSTGLSDNNKK 228

Query: 124 ----------------GNNSRTKYNLTDEDTQSVTSSSSFWTADGSNESSL 20
                           G+N++    L+DEDT+S TS+SSFWT +GSNESSL
Sbjct: 229 TSILSDEDNSSFWTDNGSNNQKTSILSDEDTRSGTSNSSFWTDEGSNESSL 279


>gb|KVI06756.1| Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Cynara
           cardunculus var. scolymus]
          Length = 1105

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 53/138 (38%), Positives = 68/138 (49%), Gaps = 19/138 (13%)
 Frame = -1

Query: 361 PATLLSEDLHHKGDVGVESYARQHATSSTSEVNTPVSYEGHSNFSTPTKWPAGVTLESFE 182
           P     E +HHK D G++S+A +  T S  +  +  S E  S FSTP K     + +S  
Sbjct: 183 PGENFHEGMHHKDDAGIQSHAHRPETRSIFQSASESSCEEFSTFSTPNKSSTEASSDSSG 242

Query: 181 -------------------TEKSAHQTVVSSARKSTVLGNNSRTKYNLTDEDTQSVTSSS 59
                              T KS HQ++VS  RKST     ++ K NL+DEDTQS  SSS
Sbjct: 243 DSDRMDAHQFVDAVSGNSVTVKSGHQSLVSPGRKSTGSRKINQNKSNLSDEDTQSRVSSS 302

Query: 58  SFWTADGSNESSLSEPAT 5
           S     GSN SS SEP+T
Sbjct: 303 SSRGDGGSNGSSFSEPST 320


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