BLASTX nr result

ID: Chrysanthemum21_contig00020553 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00020553
         (386 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88656.1| Ankyrin repeat-containing protein [Cynara cardunc...    40   1e-05

>gb|KVH88656.1| Ankyrin repeat-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 798

 Score = 39.7 bits (91), Expect(3) = 1e-05
 Identities = 18/34 (52%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
 Frame = -1

Query: 101 HLAVRKGKNNFIKELLNFVGNG-EIENKNSEGHT 3
           HLAV  G+N+F+K+LL+F+ +G EIE +N +G T
Sbjct: 193 HLAVELGQNDFVKKLLDFIDDGNEIEKQNLDGRT 226



 Score = 29.6 bits (65), Expect(3) = 1e-05
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 210 ELQDATIEGHWWKKNPYLKTTKV 142
           +L+ AT+EG WW+    LK  K+
Sbjct: 156 QLRKATVEGRWWRAEAILKNAKM 178



 Score = 26.6 bits (57), Expect(3) = 1e-05
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -2

Query: 169 KSLLKNNKGAAKLVISDDGDTLLTWRLE 86
           +++LKN K AA   IS+DG+T+L   +E
Sbjct: 170 EAILKNAKMAATEAISNDGNTMLHLAVE 197


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