BLASTX nr result

ID: Chrysanthemum21_contig00019500 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00019500
         (355 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97060.1| DNA repair protein Sae2/CtIP, partial [Cynara car...    47   3e-09
gb|OTF92227.1| putative gamma response protein [Helianthus annuus]     45   5e-09
ref|XP_022016954.1| protein gamma response 1 [Helianthus annuus]       45   5e-09
ref|XP_023738834.1| protein gamma response 1 [Lactuca sativa] >g...    50   6e-07

>gb|KVH97060.1| DNA repair protein Sae2/CtIP, partial [Cynara cardunculus var.
           scolymus]
          Length = 764

 Score = 47.0 bits (110), Expect(2) = 3e-09
 Identities = 23/38 (60%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
 Frame = -3

Query: 152 ISKKAERADLKGISYKYSNKFYDALLP-GGDDNQNQNL 42
           + KKAERA+LKG+  K   KFYDA+LP G  DN  QNL
Sbjct: 652 VRKKAERANLKGVECKQCKKFYDAVLPDGSGDNNKQNL 689



 Score = 41.6 bits (96), Expect(2) = 3e-09
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = -2

Query: 282 IKEDFKNGILEKEIHHLSCPTSKDLTFDSYDNE 184
           IKED K G  E+EIHHL     KD+ FDS D+E
Sbjct: 595 IKEDLKKGAKEEEIHHLPGTVPKDMNFDSSDDE 627


>gb|OTF92227.1| putative gamma response protein [Helianthus annuus]
          Length = 619

 Score = 44.7 bits (104), Expect(3) = 5e-09
 Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = -3

Query: 152 ISKKAERADLKGISYKYSNKFYDALLPG-GDDNQNQ 48
           + KKAERA+LKG+  K   KFYDA+LP  G+DN N+
Sbjct: 548 VRKKAERANLKGVECKQCRKFYDAVLPADGNDNNNK 583



 Score = 38.5 bits (88), Expect(3) = 5e-09
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = -2

Query: 282 IKEDFKNGILEKEIHHLSCPTSKDLTFDSYDNE 184
           IKED K G+ E+ IH L  P  KD+  DS D+E
Sbjct: 492 IKEDLKKGVKEEAIHQLPGPVPKDMNIDSSDDE 524



 Score = 24.3 bits (51), Expect(3) = 5e-09
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 40  CDHCRGLSSHRYR 2
           C+H  G+S HRYR
Sbjct: 588 CEHHEGVSRHRYR 600


>ref|XP_022016954.1| protein gamma response 1 [Helianthus annuus]
          Length = 612

 Score = 44.7 bits (104), Expect(3) = 5e-09
 Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = -3

Query: 152 ISKKAERADLKGISYKYSNKFYDALLPG-GDDNQNQ 48
           + KKAERA+LKG+  K   KFYDA+LP  G+DN N+
Sbjct: 541 VRKKAERANLKGVECKQCRKFYDAVLPADGNDNNNK 576



 Score = 38.5 bits (88), Expect(3) = 5e-09
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = -2

Query: 282 IKEDFKNGILEKEIHHLSCPTSKDLTFDSYDNE 184
           IKED K G+ E+ IH L  P  KD+  DS D+E
Sbjct: 485 IKEDLKKGVKEEAIHQLPGPVPKDMNIDSSDDE 517



 Score = 24.3 bits (51), Expect(3) = 5e-09
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 40  CDHCRGLSSHRYR 2
           C+H  G+S HRYR
Sbjct: 581 CEHHEGVSRHRYR 593


>ref|XP_023738834.1| protein gamma response 1 [Lactuca sativa]
 ref|XP_023738835.1| protein gamma response 1 [Lactuca sativa]
 ref|XP_023738836.1| protein gamma response 1 [Lactuca sativa]
 gb|PLY69897.1| hypothetical protein LSAT_4X46080 [Lactuca sativa]
          Length = 595

 Score = 50.4 bits (119), Expect(2) = 6e-07
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = -3

Query: 152 ISKKAERADLKGISYKYSNKFYDALLPGGDDNQNQNL 42
           + KKA+RA+LKGI  K   KFYDA+LP G DN  QNL
Sbjct: 526 VRKKADRANLKGIECKQCKKFYDAVLPEGSDNSKQNL 562



 Score = 30.4 bits (67), Expect(2) = 6e-07
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = -2

Query: 282 IKEDFKNGILEKE----IHHLSCPTSKDLTFDSYDNE 184
           IK+D K    EKE    IHHL     KD+ F+S D+E
Sbjct: 471 IKQDLKKVSKEKEEEEVIHHLPDRVPKDMNFESSDDE 507


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