BLASTX nr result

ID: Chrysanthemum21_contig00019217 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00019217
         (431 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI00075.1| No apical meristem (NAM) protein [Cynara carduncu...    75   6e-13
ref|XP_021983493.1| NAC domain-containing protein 92-like [Helia...    66   9e-10
gb|KVH90701.1| No apical meristem (NAM) protein [Cynara carduncu...    55   7e-06

>gb|KVI00075.1| No apical meristem (NAM) protein [Cynara cardunculus var. scolymus]
          Length = 352

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
 Frame = -3

Query: 414 HQYASKEIVPYASGSTLYWSN---KGHEEDNVVGQCKERYISTPSVSHDTGVSNDMXXXX 244
           +QY SK +   AS S LYWSN   K  ++ + +G  K       SVS DTGVSN+M    
Sbjct: 260 NQYVSKNLPYLASTSALYWSNTDFKKEKDQHCIGSEKT------SVSRDTGVSNEMTATT 313

Query: 243 XXXXXSILLTHE-LRMKDYDPDDDIGPSTFSELDTLLEY 130
                + LL+ + LR  +YDPDD +G STFSELD+LLEY
Sbjct: 314 TETSFTSLLSKDGLRHTEYDPDDHVGTSTFSELDSLLEY 352


>ref|XP_021983493.1| NAC domain-containing protein 92-like [Helianthus annuus]
 gb|OTG37995.1| putative NAC domain-containing protein [Helianthus annuus]
          Length = 364

 Score = 65.9 bits (159), Expect = 9e-10
 Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
 Frame = -3

Query: 423 MNEHQYASKEIVPYASGSTLYWSNKGH--EEDNVVGQCKERYISTP-------SVSHDTG 271
           M+EHQY  +      SGSTLY  N G   E++N  G+ K  ++          +VS+D  
Sbjct: 257 MSEHQYVGENAKCLPSGSTLYLPNNGVKIEKNNAFGKRKMEHLIPTFNQVRKINVSNDVK 316

Query: 270 VSNDMXXXXXXXXXSILLTHELRMKDY--DPDDDIGPSTFSELDTLLEY 130
           +SNDM          +L  H LR ++Y  D DDD  PSTFSELD+LL+Y
Sbjct: 317 ISNDMTNNETSSTS-MLSEHNLRTREYYNDDDDDNDPSTFSELDSLLQY 364


>gb|KVH90701.1| No apical meristem (NAM) protein [Cynara cardunculus var. scolymus]
          Length = 407

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
 Frame = -3

Query: 429 PYMNEHQYASK--------EIVPYAS--GSTLYW---SNKGHEEDNVVGQCK-ERYISTP 292
           P++++HQ ++            PY S  GST Y    S    E + V GQCK E Y+++ 
Sbjct: 291 PFISDHQLSTHPNFASTLANNFPYLSSPGSTRYMDQASGLEGEAEKVGGQCKVEPYVTST 350

Query: 291 S-------VSHDTGVSNDMXXXXXXXXXSILLTHELRMKDYD-PDDDIGPSTFSELDTLL 136
           +        S DTGVSND+              H++ M+ YD PDD   PS  SELD+LL
Sbjct: 351 NQSSKISVTSQDTGVSNDITTEISSSSK-----HDMSMRPYDHPDDQTTPSVLSELDSLL 405

Query: 135 EY 130
           EY
Sbjct: 406 EY 407


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