BLASTX nr result
ID: Chrysanthemum21_contig00019172
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00019172
(1043 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_021972912.1| U1 small nuclear ribonucleoprotein 70 kDa-li... 57 2e-08
ref|XP_022009678.1| U1 small nuclear ribonucleoprotein 70 kDa-li... 56 4e-08
gb|PLY92491.1| hypothetical protein LSAT_2X76601 [Lactuca sativa] 54 2e-07
ref|XP_023754529.1| U1 small nuclear ribonucleoprotein 70 kDa [L... 54 2e-07
gb|OVA04517.1| RNA recognition motif domain [Macleaya cordata] 56 2e-07
gb|KVH99828.1| U1 small nuclear ribonucleoprotein of 70kDa N-ter... 52 2e-07
gb|KVI08840.1| Nucleotide-binding, alpha-beta plait [Cynara card... 52 8e-07
ref|XP_015890205.1| PREDICTED: U1 small nuclear ribonucleoprotei... 50 5e-06
ref|XP_015890206.1| PREDICTED: U1 small nuclear ribonucleoprotei... 50 5e-06
gb|PIN24139.1| U1 small nuclear ribonucleoprotein (RRM superfami... 52 5e-06
ref|XP_011099600.1| LOW QUALITY PROTEIN: U1 small nuclear ribonu... 52 6e-06
>ref|XP_021972912.1| U1 small nuclear ribonucleoprotein 70 kDa-like [Helianthus annuus]
gb|OTG20415.1| putative U1 small nuclear ribonucleoprotein-70K [Helianthus annuus]
Length = 481
Score = 57.0 bits (136), Expect(2) = 2e-08
Identities = 27/37 (72%), Positives = 27/37 (72%)
Frame = +1
Query: 781 PEKTKFLQYTSMV*FVSKFVEPTDPEYASPIVKGETP 891
PEK K YT M FVS F EPTDPEYA PIVKGETP
Sbjct: 62 PEKRKCPPYTGMAQFVSNFAEPTDPEYAPPIVKGETP 98
Score = 31.2 bits (69), Expect(2) = 2e-08
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 698 IGRSYSMGLMNKN*VFFEPCSLLEYKHPPKRQ 793
IG+S+ GL N FEP LEYK PP+++
Sbjct: 34 IGQSHPTGLTNNLLKLFEPRPPLEYKPPPEKR 65
>ref|XP_022009678.1| U1 small nuclear ribonucleoprotein 70 kDa-like [Helianthus annuus]
gb|OTF98036.1| putative nucleotide-binding alpha-beta plait domain-containing
protein [Helianthus annuus]
Length = 477
Score = 55.8 bits (133), Expect(2) = 4e-08
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = +1
Query: 781 PEKTKFLQYTSMV*FVSKFVEPTDPEYASPIVKGETP 891
PEK K YT M FVS FVEPTDPEYA P+ KGETP
Sbjct: 62 PEKRKCPPYTGMAQFVSSFVEPTDPEYAPPVEKGETP 98
Score = 31.2 bits (69), Expect(2) = 4e-08
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 698 IGRSYSMGLMNKN*VFFEPCSLLEYKHPPKRQ 793
IG+S+ GL N FEP LEYK PP+++
Sbjct: 34 IGQSHPTGLTNNLLKLFEPRPPLEYKPPPEKR 65
>gb|PLY92491.1| hypothetical protein LSAT_2X76601 [Lactuca sativa]
Length = 505
Score = 53.9 bits (128), Expect(2) = 2e-07
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +1
Query: 781 PEKTKFLQYTSMV*FVSKFVEPTDPEYASPIVKGETP 891
PEK K YT M FVS F EPTDPEYA P+ KGETP
Sbjct: 62 PEKRKCPPYTGMAQFVSHFAEPTDPEYAPPVEKGETP 98
Score = 31.2 bits (69), Expect(2) = 2e-07
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 698 IGRSYSMGLMNKN*VFFEPCSLLEYKHPPKRQ 793
IG+S+ GL N FEP LEYK PP+++
Sbjct: 34 IGQSHPTGLTNNLLKLFEPRPPLEYKPPPEKR 65
>ref|XP_023754529.1| U1 small nuclear ribonucleoprotein 70 kDa [Lactuca sativa]
Length = 487
Score = 53.9 bits (128), Expect(2) = 2e-07
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +1
Query: 781 PEKTKFLQYTSMV*FVSKFVEPTDPEYASPIVKGETP 891
PEK K YT M FVS F EPTDPEYA P+ KGETP
Sbjct: 62 PEKRKCPPYTGMAQFVSHFAEPTDPEYAPPVEKGETP 98
Score = 31.2 bits (69), Expect(2) = 2e-07
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 698 IGRSYSMGLMNKN*VFFEPCSLLEYKHPPKRQ 793
IG+S+ GL N FEP LEYK PP+++
Sbjct: 34 IGQSHPTGLTNNLLKLFEPRPPLEYKPPPEKR 65
>gb|OVA04517.1| RNA recognition motif domain [Macleaya cordata]
Length = 495
Score = 55.8 bits (133), Expect(2) = 2e-07
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +1
Query: 781 PEKTKFLQYTSMV*FVSKFVEPTDPEYASPIVKGETPVR 897
PEK K L YT M +VSKFVEP DP+YA P+ KGETP +
Sbjct: 62 PEKRKCLPYTGMAQYVSKFVEPGDPQYAPPVQKGETPAQ 100
Score = 28.9 bits (63), Expect(2) = 2e-07
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 698 IGRSYSMGLMNKN*VFFEPCSLLEYKHPPKRQ 793
IG+S+ GL FEP LEYK PP+++
Sbjct: 34 IGQSHPTGLTTNLLKLFEPRPPLEYKPPPEKR 65
>gb|KVH99828.1| U1 small nuclear ribonucleoprotein of 70kDa N-terminal [Cynara
cardunculus var. scolymus]
Length = 105
Score = 51.6 bits (122), Expect(2) = 2e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +1
Query: 781 PEKTKFLQYTSMV*FVSKFVEPTDPEYASPIVKGETP 891
PEK K YT MV FVS+F E TDP+YA P+ KGETP
Sbjct: 67 PEKRKCPPYTGMVQFVSQFAESTDPKYAPPVQKGETP 103
Score = 33.1 bits (74), Expect(2) = 2e-07
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 695 EIGRSYSMGLMNKN*VFFEPCSLLEYKHPPKRQ 793
EIG+S+ GL N FEP LEYK PP+++
Sbjct: 38 EIGQSHPTGLTNNLLKLFEPRPPLEYKPPPEKR 70
>gb|KVI08840.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 484
Score = 51.6 bits (122), Expect(2) = 8e-07
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +1
Query: 781 PEKTKFLQYTSMV*FVSKFVEPTDPEYASPIVKGETP 891
PEK K YT M FVS+F E TDPEYA P+ KGETP
Sbjct: 62 PEKRKCPPYTGMAQFVSQFAESTDPEYAPPVQKGETP 98
Score = 31.2 bits (69), Expect(2) = 8e-07
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 698 IGRSYSMGLMNKN*VFFEPCSLLEYKHPPKRQ 793
IG+S+ GL N FEP LEYK PP+++
Sbjct: 34 IGQSHPTGLTNNLLKLFEPRPPLEYKPPPEKR 65
>ref|XP_015890205.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform X1
[Ziziphus jujuba]
Length = 496
Score = 50.4 bits (119), Expect(2) = 5e-06
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +1
Query: 781 PEKTKFLQYTSMV*FVSKFVEPTDPEYASPIVKGETPV 894
PEK K T + FVSKF EP DPEYA P+ KGETPV
Sbjct: 62 PEKRKCPPLTGVAQFVSKFAEPGDPEYAPPVQKGETPV 99
Score = 29.6 bits (65), Expect(2) = 5e-06
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 698 IGRSYSMGLMNKN*VFFEPCSLLEYKHPPKRQ 793
IG+S+ GL N FEP LE+K PP+++
Sbjct: 34 IGQSHPTGLTNNLLKLFEPRPPLEFKPPPEKR 65
>ref|XP_015890206.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform X2
[Ziziphus jujuba]
Length = 492
Score = 50.4 bits (119), Expect(2) = 5e-06
Identities = 24/38 (63%), Positives = 26/38 (68%)
Frame = +1
Query: 781 PEKTKFLQYTSMV*FVSKFVEPTDPEYASPIVKGETPV 894
PEK K T + FVSKF EP DPEYA P+ KGETPV
Sbjct: 62 PEKRKCPPLTGVAQFVSKFAEPGDPEYAPPVQKGETPV 99
Score = 29.6 bits (65), Expect(2) = 5e-06
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 698 IGRSYSMGLMNKN*VFFEPCSLLEYKHPPKRQ 793
IG+S+ GL N FEP LE+K PP+++
Sbjct: 34 IGQSHPTGLTNNLLKLFEPRPPLEFKPPPEKR 65
>gb|PIN24139.1| U1 small nuclear ribonucleoprotein (RRM superfamily) [Handroanthus
impetiginosus]
Length = 491
Score = 52.0 bits (123), Expect(2) = 5e-06
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +1
Query: 781 PEKTKFLQYTSMV*FVSKFVEPTDPEYASPIVKGETP 891
PEK K L YT M FVS F EP DPEYA P+ K ETP
Sbjct: 62 PEKRKCLPYTGMAQFVSNFAEPGDPEYAPPVQKAETP 98
Score = 28.1 bits (61), Expect(2) = 5e-06
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 698 IGRSYSMGLMNKN*VFFEPCSLLEYKHPPKRQ 793
IG+S+ GL FEP LEYK PP+++
Sbjct: 34 IGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 65
>ref|XP_011099600.1| LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein 70 kDa
[Sesamum indicum]
Length = 507
Score = 51.6 bits (122), Expect(2) = 6e-06
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +1
Query: 781 PEKTKFLQYTSMV*FVSKFVEPTDPEYASPIVKGETP 891
PEK K YT M FVS F EP DPEYA P+ KGETP
Sbjct: 62 PEKRKCPPYTGMAQFVSNFAEPGDPEYAPPVQKGETP 98
Score = 28.1 bits (61), Expect(2) = 6e-06
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 698 IGRSYSMGLMNKN*VFFEPCSLLEYKHPPKRQ 793
IG+S+ GL FEP LEYK PP+++
Sbjct: 34 IGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 65