BLASTX nr result

ID: Chrysanthemum21_contig00018987 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00018987
         (410 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ALF46583.1| GRAS protein, partial [Chrysanthemum x morifolium]     137   5e-35
ref|XP_021970463.1| scarecrow-like protein 33 [Helianthus annuus...    60   6e-08
gb|KVI11946.1| Transcription factor GRAS [Cynara cardunculus var...    57   1e-06
ref|XP_023732535.1| scarecrow-like protein 34 [Lactuca sativa] >...    57   1e-06

>gb|ALF46583.1| GRAS protein, partial [Chrysanthemum x morifolium]
          Length = 725

 Score =  137 bits (346), Expect = 5e-35
 Identities = 68/81 (83%), Positives = 68/81 (83%)
 Frame = -1

Query: 245 MVMESGIHEYADYSNGFSWDNENISPGFDQFSSYANNGYRFRDEXXXXXXXXXXXXXPNQ 66
           MVMESGIHEYADYSNGFSWDNENISPGFDQFSSYANNGYRFRDE             PNQ
Sbjct: 1   MVMESGIHEYADYSNGFSWDNENISPGFDQFSSYANNGYRFRDEPLDISFLDPPLSVPNQ 60

Query: 65  DAGTVTSVISQINLPEEYEDS 3
           DAGTVTSVISQINLPEEYEDS
Sbjct: 61  DAGTVTSVISQINLPEEYEDS 81


>ref|XP_021970463.1| scarecrow-like protein 33 [Helianthus annuus]
 gb|OTG23125.1| putative GRAS family transcription factor [Helianthus annuus]
          Length = 736

 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
 Frame = -1

Query: 245 MVMESGIHEYADYSNGFSWDNENISPGFDQFSSYANNGYRFRDE----XXXXXXXXXXXX 78
           MVMES   EY D+ NGFS D+EN SP FDQ+  +  NGYRFRDE                
Sbjct: 1   MVMESSFQEYTDFINGFSLDDENTSPVFDQYPGHV-NGYRFRDEPLDLSFLDVPSPSPTP 59

Query: 77  XPNQDAGTVTSVISQINLPEEYED 6
             +  +  +  V  Q++ P+EY D
Sbjct: 60  ANDPASANLLPVALQVDSPDEYTD 83


>gb|KVI11946.1| Transcription factor GRAS [Cynara cardunculus var. scolymus]
          Length = 654

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = -1

Query: 245 MVMESGIHEYADYSNGFSWDNENISPGFDQFSSYANNGYRFRDEXXXXXXXXXXXXXPNQ 66
           MVMES  H ++DY+NGF+ D+ENI P FD   S A  GYRFRDE             PN 
Sbjct: 1   MVMESRFHGFSDYTNGFALDDENILPTFDHSPSLA-TGYRFRDEPLDLSFLDLPSPAPNH 59

Query: 65  DAGTVTS---VISQINLPEEYED 6
           D  T+ +   +  Q++  +E+ D
Sbjct: 60  DPVTLNAFPGMPPQVHSTDEFAD 82


>ref|XP_023732535.1| scarecrow-like protein 34 [Lactuca sativa]
 gb|PLY74845.1| hypothetical protein LSAT_8X73841 [Lactuca sativa]
          Length = 720

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 36/80 (45%), Positives = 43/80 (53%)
 Frame = -1

Query: 245 MVMESGIHEYADYSNGFSWDNENISPGFDQFSSYANNGYRFRDEXXXXXXXXXXXXXPNQ 66
           MVMES  HE  DY +GFS D+EN  P FDQF+++   GYRFRDE              N 
Sbjct: 1   MVMESRFHENLDYISGFSLDDENTLPNFDQFTNH-TTGYRFRDE-PLDLSFLDVPPALNN 58

Query: 65  DAGTVTSVISQINLPEEYED 6
           D  TV S  SQ + P+   D
Sbjct: 59  DLATVNS-SSQQDSPDVVTD 77


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