BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00018634
         (1599 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023761916.1| DNA-directed RNA polymerase I subunit rpa49 ...   549   0.0  
ref|XP_021989965.1| DNA-directed RNA polymerase I subunit rpa49 ...   545   0.0  
gb|KVH92979.1| RNA polymerase I associated factor, A49-like prot...   459   e-155
ref|XP_019247027.1| PREDICTED: DNA-directed RNA polymerase I sub...   418   e-139
ref|XP_009769327.1| PREDICTED: DNA-directed RNA polymerase I sub...   414   e-137
ref|XP_016464019.1| PREDICTED: DNA-directed RNA polymerase I sub...   413   e-137
ref|XP_009620774.1| PREDICTED: DNA-directed RNA polymerase I sub...   412   e-137
ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   406   e-134
ref|XP_022868853.1| DNA-directed RNA polymerase I subunit rpa49-...   407   e-134
ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I sub...   404   e-134
gb|PHT45393.1| hypothetical protein CQW23_14551 [Capsicum baccatum]   403   e-133
gb|PHU14311.1| hypothetical protein BC332_15516 [Capsicum chinense]   403   e-133
ref|XP_022842785.1| DNA-directed RNA polymerase I subunit rpa49-...   402   e-133
ref|XP_016575329.1| PREDICTED: DNA-directed RNA polymerase I sub...   402   e-132
ref|XP_006350715.1| PREDICTED: DNA-directed RNA polymerase I sub...   400   e-132
gb|PIN22299.1| RNA polymerase I 49 kDa subunit [Handroanthus imp...   401   e-132
ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I sub...   397   e-131
ref|XP_004240985.1| PREDICTED: DNA-directed RNA polymerase I sub...   394   e-130
emb|CBI35920.3| unnamed protein product, partial [Vitis vinifera]     392   e-129
ref|XP_015077190.1| PREDICTED: DNA-directed RNA polymerase I sub...   393   e-129

>ref|XP_023761916.1| DNA-directed RNA polymerase I subunit rpa49 [Lactuca sativa]
 gb|PLY87172.1| hypothetical protein LSAT_5X135221 [Lactuca sativa]
          Length = 434

 Score =  549 bits (1415), Expect = 0.0
 Identities = 278/397 (70%), Positives = 328/397 (82%), Gaps = 4/397 (1%)
 Frame = +2

Query: 92   RKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYSES-KTDVKVMKHVKRSNRMQLV 268
            RK+ +   VKIET+N + DKSLP+IGYF SGYDP+K   + K  V+++K+VKRSNR+QLV
Sbjct: 40   RKRDETIEVKIETINGSSDKSLPLIGYFPSGYDPEKRQRTEKPKVRILKNVKRSNRLQLV 99

Query: 269  VTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECNKIFR 448
            V+ N           ++ F+GTNYSGE A  QVCSY+LGVLDK+T  LKIV IE NKIFR
Sbjct: 100  VSPNQSS--------QMNFIGTNYSGEGAVPQVCSYALGVLDKQTQTLKIVQIEANKIFR 151

Query: 449  LEPRFGDEVDPADEISKADEAE---EKKERTFQFSTKKSEQTAKKEKALRANRDPNAQAD 619
            LEP+F ++ +P DE  K DE +   E  E  + FSTKKSE+ AKKE+ALRANRDP AQ D
Sbjct: 152  LEPKFDNQENPVDETVKEDENKVTAEDTEAKYNFSTKKSERAAKKERALRANRDPEAQED 211

Query: 620  LNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKGEWRYLLDIA 799
            LN+KMA+AKVN +ALEV A T +SARNIPPHD+SAT P++AYPL+KIIFKGEWRYLLDI 
Sbjct: 212  LNNKMAEAKVNKEALEVGA-TVTSARNIPPHDMSATTPQQAYPLQKIIFKGEWRYLLDIM 270

Query: 800  EILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFKDKHSMDGFS 979
            E+LQ+G  +T + +PVF+C+RIHKI+EVK EE +E+LACI+SYINHLIKFKDKHSMDGFS
Sbjct: 271  ELLQQGVDITTQGFPVFICSRIHKIEEVKDEEAKESLACIFSYINHLIKFKDKHSMDGFS 330

Query: 980  SAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKTEFSDIAKDL 1159
            SAK HKLPNIL+QKFNDMFAN ESKRLADDKRDLLISYVLVLTLF D+FKTEFSDIAKDL
Sbjct: 331  SAKDHKLPNILSQKFNDMFANQESKRLADDKRDLLISYVLVLTLFADNFKTEFSDIAKDL 390

Query: 1160 RMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKFPE 1270
            RMS+G LR +FEFLGCKF REN+IMLATLPAPLKFPE
Sbjct: 391  RMSTGDLRRHFEFLGCKFIRENSIMLATLPAPLKFPE 427


>ref|XP_021989965.1| DNA-directed RNA polymerase I subunit rpa49 [Helianthus annuus]
 gb|OTG12685.1| putative DNA binding,DNA-directed RNA polymerase [Helianthus annuus]
          Length = 435

 Score =  545 bits (1403), Expect = 0.0
 Identities = 285/426 (66%), Positives = 330/426 (77%), Gaps = 5/426 (1%)
 Frame = +2

Query: 8    QNAKKHKHDTTLTXXXXXXXXXXXXSSKRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGY 187
            Q+ KKHKH                    RK+ +   VKIET+  + DKSLP+IGYF SGY
Sbjct: 28   QSKKKHKHKKI-----------------RKREEKIEVKIETVKASSDKSLPLIGYFPSGY 70

Query: 188  DPDKYSE-SKTDVKVMKHVKRSNRMQLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQ 364
            DP+K     +  V+V+K +KRS+R+Q+VV+ N            V FVGTNYSGEA   Q
Sbjct: 71   DPEKRQRVEEPTVRVLKSLKRSHRLQVVVSPNQSSP--------VNFVGTNYSGEAVVPQ 122

Query: 365  VCSYSLGVLDKETGVLKIVPIECNKIFRLEPRFGDEVDPADEISKADEAE---EKKERTF 535
            +CSY+LGVLDK+T  LKIV IE NKIFRLEPRFGD    ADE SK  E E   E  +  F
Sbjct: 123  MCSYALGVLDKQTQTLKIVQIESNKIFRLEPRFGDHDKAADEASKKVENEATVEDSKTKF 182

Query: 536  QFSTKKSEQTAKKEKALRANRDPNAQADLNSKMADAKVNAKALEVSAATTS-SARNIPPH 712
             FSTKKSE+TAKKEKALRA RDP AQ DLN KMA+A V+ +A+E+SA T+S +ARNIPPH
Sbjct: 183  NFSTKKSERTAKKEKALRAYRDPEAQEDLNDKMAEAAVDTEAIEISAQTSSITARNIPPH 242

Query: 713  DLSATIPKEAYPLEKIIFKGEWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGE 892
            D+SAT P++AYPLEKII KGEWRYL DIAE+LQEGK++   SYP+FVCNRIHKI+EVK E
Sbjct: 243  DISATRPQQAYPLEKIILKGEWRYLSDIAELLQEGKTINSASYPLFVCNRIHKIEEVKDE 302

Query: 893  EERENLACIYSYINHLIKFKDKHSMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDK 1072
            E +E+L CI+SYINHLIKFKDKHSMDG+SSAKHHKLPNIL QKFNDMFAN ESKRLADDK
Sbjct: 303  EVKESLTCIFSYINHLIKFKDKHSMDGYSSAKHHKLPNILNQKFNDMFANTESKRLADDK 362

Query: 1073 RDLLISYVLVLTLFVDDFKTEFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPA 1252
            RDLLISYVLVLTLFVD+FKTEFSDIAKDLRM++GALRP+FE+LGCKF RE+NI LA LPA
Sbjct: 363  RDLLISYVLVLTLFVDNFKTEFSDIAKDLRMTTGALRPHFEYLGCKFVREHNITLAMLPA 422

Query: 1253 PLKFPE 1270
            PLKFPE
Sbjct: 423  PLKFPE 428


>gb|KVH92979.1| RNA polymerase I associated factor, A49-like protein, partial [Cynara
            cardunculus var. scolymus]
          Length = 407

 Score =  459 bits (1181), Expect = e-155
 Identities = 247/394 (62%), Positives = 288/394 (73%), Gaps = 1/394 (0%)
 Frame = +2

Query: 92   RKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYS-ESKTDVKVMKHVKRSNRMQLV 268
            RK+ +   VKIET++ + DKSLP+IGYF SGYDP+K   + +  V+V+K++KR++R QLV
Sbjct: 79   RKREERIEVKIETVHGSSDKSLPLIGYFPSGYDPEKRQRDEEPRVRVLKNMKRNHRYQLV 138

Query: 269  VTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECNKIFR 448
            V+ N   +        V+FVGTNYSGEAAA Q+CSY+LGVLDK++  LKIV IE NK   
Sbjct: 139  VSPNQSST--------VEFVGTNYSGEAAAPQICSYALGVLDKQSQTLKIVQIEANK--- 187

Query: 449  LEPRFGDEVDPADEISKADEAEEKKERTFQFSTKKSEQTAKKEKALRANRDPNAQADLNS 628
                                                   AKKE+ALRANRDP AQ DLN 
Sbjct: 188  ---------------------------------------AKKERALRANRDPEAQEDLNK 208

Query: 629  KMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKGEWRYLLDIAEIL 808
            KMADAKVN +ALEVSAATTSSARNIPPHD+SAT+P++AYPLEKII KGEWRYLLDIAE+L
Sbjct: 209  KMADAKVNTEALEVSAATTSSARNIPPHDISATMPQQAYPLEKIILKGEWRYLLDIAELL 268

Query: 809  QEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFKDKHSMDGFSSAK 988
            QEGK +TP +YPVFVCNR+HKIDE                      FKDK+SMDGFS+AK
Sbjct: 269  QEGKDITPAAYPVFVCNRVHKIDE----------------------FKDKNSMDGFSAAK 306

Query: 989  HHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKTEFSDIAKDLRMS 1168
            +HKLPNILTQKFNDMFAN +SKRLADDKRDLLISYVLVLTL+VD+FKTEFSDIAKDLRMS
Sbjct: 307  NHKLPNILTQKFNDMFANPDSKRLADDKRDLLISYVLVLTLYVDNFKTEFSDIAKDLRMS 366

Query: 1169 SGALRPYFEFLGCKFTRENNIMLATLPAPLKFPE 1270
            +GALR +FE LGCKF REN+IMLATLPAPLKFPE
Sbjct: 367  TGALRRHFEHLGCKFIRENSIMLATLPAPLKFPE 400


>ref|XP_019247027.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nicotiana
            attenuata]
 gb|OIT01790.1| hypothetical protein A4A49_25030 [Nicotiana attenuata]
          Length = 444

 Score =  418 bits (1075), Expect = e-139
 Identities = 218/400 (54%), Positives = 289/400 (72%), Gaps = 8/400 (2%)
 Frame = +2

Query: 89   KRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYSESKTDVKVMKHVKRSNRMQLV 268
            K+KK K   V IET+   P+K+ PI+GYFSSGYDP + ++S  + ++ ++VKR+NR+QLV
Sbjct: 49   KKKKEKQLAVTIETIAENPNKTSPIVGYFSSGYDPLRNNDS--NAQLYRNVKRNNRLQLV 106

Query: 269  VTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECNKIFR 448
            V+ N  +         V FVGTNYSGEA + Q+C+YSLGVLDKET  LKIVPI  NKI R
Sbjct: 107  VSPNGAQ---------VDFVGTNYSGEATSAQLCTYSLGVLDKETQTLKIVPIAANKIIR 157

Query: 449  LEPRF-GDEV----DP---ADEISKADEAEEKKERTFQFSTKKSEQTAKKEKALRANRDP 604
            LEPR  G +V    DP     E++  +  ++ +E T  +S+KKS + A+K  +LR   D 
Sbjct: 158  LEPRIRGSDVPENEDPDTVKQELTAEERTDKMRELTQMYSSKKSIRQARKLDSLRQQEDT 217

Query: 605  NAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKGEWRY 784
              Q + +  +A A +N +ALEV A TT +ARNIPPHDL+AT+P+ AYPL +II +GEW Y
Sbjct: 218  GTQEEFDRNIAGA-INKEALEV-AVTTDNARNIPPHDLAATVPQLAYPLNRIILEGEWDY 275

Query: 785  LLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFKDKHS 964
            LLD+ ++ + G    P+ YP FVCNR +K++ ++ EEE+  LA I SYI HL+KFKDKHS
Sbjct: 276  LLDVLKLTEAGAETKPDLYPSFVCNRSYKLEHIQNEEEKRRLAGILSYITHLVKFKDKHS 335

Query: 965  MDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKTEFSD 1144
            MDG SSAKHHK+P +L QKF+ MFA  +SKRL D+K+ LLI+YVLVLTLFVDDF+++ SD
Sbjct: 336  MDGVSSAKHHKIPGMLFQKFSSMFAVPDSKRLPDEKKALLINYVLVLTLFVDDFRSDLSD 395

Query: 1145 IAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKF 1264
            IAKDLRM  GALRP++E+LGCK  RE +++LATLP PLKF
Sbjct: 396  IAKDLRMDIGALRPHYEYLGCKLVREKHVLLATLPVPLKF 435


>ref|XP_009769327.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like isoform
            X1 [Nicotiana sylvestris]
 ref|XP_016440475.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like isoform
            X1 [Nicotiana tabacum]
          Length = 446

 Score =  414 bits (1064), Expect = e-137
 Identities = 216/421 (51%), Positives = 292/421 (69%), Gaps = 8/421 (1%)
 Frame = +2

Query: 26   KHDTTLTXXXXXXXXXXXXSSKRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYS 205
            ++DT  +            + K+KK K   V IET+  +P+K+ PI+GYFSSGYDP + +
Sbjct: 30   RNDTQYSQHQEIDKVKSDNTKKKKKEKQLAVTIETIAESPNKTSPIVGYFSSGYDPLRNN 89

Query: 206  ESKTDVKVMKHVKRSNRMQLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLG 385
            +S  + ++ ++VKR+NR+QLVV+ N            V FVGTNYSGEA + Q+C+YSLG
Sbjct: 90   DS--NAQLYRNVKRNNRLQLVVSPNGAP---------VDFVGTNYSGEATSAQLCTYSLG 138

Query: 386  VLDKETGVLKIVPIECNKIFRLEPRFGDEVDPADE--------ISKADEAEEKKERTFQF 541
            VLDKET  LKIVPI  NKI RLEPR      P +E        ++  +  ++ +E T  +
Sbjct: 139  VLDKETQTLKIVPIAANKIIRLEPRVRGSDAPENEDPDTVKQELTAEERTDKMRELTQMY 198

Query: 542  STKKSEQTAKKEKALRANRDPNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLS 721
            S+KKS + A+K  +LR   D   Q + +  +A A +N +ALEV A TT +ARNIPPHDL+
Sbjct: 199  SSKKSIRQARKLDSLRQQEDTGNQEEFDRNIAGA-INKEALEV-AVTTDNARNIPPHDLA 256

Query: 722  ATIPKEAYPLEKIIFKGEWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEER 901
            AT P+ AYPL +II +GEW YLLD+ ++ + G  + P+ YP FVCNR +K++ ++ EEE+
Sbjct: 257  ATAPELAYPLNRIILEGEWDYLLDVLKLTEAGAEMKPDLYPSFVCNRSYKLEHIQNEEEK 316

Query: 902  ENLACIYSYINHLIKFKDKHSMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDL 1081
              LA I SYI HL+KFKDKHSMDG SSAKHHK+P +L QKF+ MFA  +SKR+ D+K+ L
Sbjct: 317  RRLAGILSYITHLVKFKDKHSMDGVSSAKHHKIPGMLFQKFSSMFAVPDSKRIPDEKKAL 376

Query: 1082 LISYVLVLTLFVDDFKTEFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLK 1261
            LI+YVLVLTLFVDDF+++ SDIAKDLRM  GALRP++E+LGCK  RE +++LATLP PLK
Sbjct: 377  LINYVLVLTLFVDDFRSDLSDIAKDLRMDIGALRPHYEYLGCKLVREKHVLLATLPVPLK 436

Query: 1262 F 1264
            F
Sbjct: 437  F 437


>ref|XP_016464019.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like
            [Nicotiana tabacum]
          Length = 442

 Score =  413 bits (1062), Expect = e-137
 Identities = 216/400 (54%), Positives = 288/400 (72%), Gaps = 8/400 (2%)
 Frame = +2

Query: 89   KRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYSESKTDVKVMKHVKRSNRMQLV 268
            K+KK K   V IET+   P+K+ PI+GYFSSGYDP + + S    ++ ++VKR+NR+QLV
Sbjct: 47   KKKKEKQLAVTIETIAENPNKTSPIVGYFSSGYDPLRNNNSSA--QLYRNVKRNNRLQLV 104

Query: 269  VTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECNKIFR 448
            V+ N  +         V FVGTNYSGEA + Q+C+YSLGVLDKET  LKIVPI  NKI R
Sbjct: 105  VSPNGAQ---------VDFVGTNYSGEATSAQLCTYSLGVLDKETQTLKIVPIAANKIIR 155

Query: 449  LEPRF-GDEV----DP---ADEISKADEAEEKKERTFQFSTKKSEQTAKKEKALRANRDP 604
            LEPR  G +V    DP     E++  +  ++ +E T  +S+KKS + A+K  +LR   D 
Sbjct: 156  LEPRVRGSDVPENEDPDTVKQELTAEERNDKMRELTQMYSSKKSIRQARKLDSLRQQEDT 215

Query: 605  NAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKGEWRY 784
              Q + +  +A A +N +ALEV A TT +ARNIPPHDL+AT+P+ AYPL +II +GEW Y
Sbjct: 216  GNQEEFDRNIAGA-INKEALEV-AITTDNARNIPPHDLAATVPQLAYPLNRIILEGEWDY 273

Query: 785  LLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFKDKHS 964
            LLD+ ++ + G  + P+ YP FVCNR +K++ ++ EEE+  LA I SYI HL+KFKDKHS
Sbjct: 274  LLDVLKLTEAGAEMKPDLYPSFVCNRSYKLEHIQNEEEKRRLAGILSYITHLVKFKDKHS 333

Query: 965  MDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKTEFSD 1144
            MDG SSAKHHK+P +L QKF+ MFA  +SKRL ++K+ LLI+YVLVLTLFVDDF+++ SD
Sbjct: 334  MDGVSSAKHHKIPGMLFQKFSSMFAVPDSKRLPEEKKSLLINYVLVLTLFVDDFRSDLSD 393

Query: 1145 IAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKF 1264
            IAKDLRM+ G LRP++E+LGCK  RE +++LATLP PLKF
Sbjct: 394  IAKDLRMNIGTLRPHYEYLGCKLVREKHVLLATLPVPLKF 433


>ref|XP_009620774.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nicotiana
            tomentosiformis]
          Length = 442

 Score =  412 bits (1060), Expect = e-137
 Identities = 215/400 (53%), Positives = 287/400 (71%), Gaps = 8/400 (2%)
 Frame = +2

Query: 89   KRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYSESKTDVKVMKHVKRSNRMQLV 268
            K+KK K   V IET+   P+K+ PI+GYFSSGYDP +   +    ++ ++VKR+NR+QLV
Sbjct: 47   KKKKEKQLAVTIETIAENPNKTSPIVGYFSSGYDPLR--NNNNSAQLYRNVKRNNRLQLV 104

Query: 269  VTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECNKIFR 448
            V+ N  +         V FVGTNYSGEA + Q+C+YSLGVLDKET  LKIVPI  NKI R
Sbjct: 105  VSPNGAQ---------VDFVGTNYSGEATSAQLCTYSLGVLDKETQTLKIVPIAANKIIR 155

Query: 449  LEPRF-GDEV----DP---ADEISKADEAEEKKERTFQFSTKKSEQTAKKEKALRANRDP 604
            LEPR  G +V    DP     E++  +  ++ +E T  +S+KKS + A+K  +LR   D 
Sbjct: 156  LEPRVRGSDVPENEDPDTVKQELTAEERNDKMRELTQMYSSKKSIRQARKLDSLRQQEDT 215

Query: 605  NAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKGEWRY 784
              Q + +  +A A +N +ALEV A TT +ARNIPPHDL+AT+P+ AYPL +II +GEW Y
Sbjct: 216  GNQEEFDRNIAGA-INKEALEV-AITTDNARNIPPHDLAATVPQLAYPLNRIILEGEWDY 273

Query: 785  LLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFKDKHS 964
            LLD+ ++ + G  + P+ YP FVCNR +K++ ++ EEE+  LA I SYI HL+KFKDKHS
Sbjct: 274  LLDVLKLTEAGAEMKPDLYPSFVCNRSYKLEHIQNEEEKRRLAGILSYITHLVKFKDKHS 333

Query: 965  MDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKTEFSD 1144
            MDG SSAKHHK+P +L QKF+ MFA  +SKRL ++K+ LLI+YVLVLTLFVDDF+++ SD
Sbjct: 334  MDGVSSAKHHKIPGMLFQKFSSMFAVPDSKRLPEEKKSLLINYVLVLTLFVDDFRSDLSD 393

Query: 1145 IAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKF 1264
            IAKDLRM+ G LRP++E+LGCK  RE +++LATLP PLKF
Sbjct: 394  IAKDLRMNIGTLRPHYEYLGCKLVREKHVLLATLPVPLKF 433


>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Vitis
            vinifera]
          Length = 421

 Score =  406 bits (1044), Expect = e-134
 Identities = 218/408 (53%), Positives = 289/408 (70%), Gaps = 13/408 (3%)
 Frame = +2

Query: 83   SSKRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYSESKTD----VKVMKHVKRS 250
            + KRKK K  NVK+E ++  P+K  P++GYF SG+DP K  + ++D    VKV ++  R+
Sbjct: 18   TKKRKKKKHVNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARA 77

Query: 251  NRMQLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIE 430
            NR+QLVV+ N+          KV FVGT+YSGEAA+ QVC+Y+LGVLDKET  LKIVPI 
Sbjct: 78   NRLQLVVSPNDS---------KVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIA 128

Query: 431  CNKIFRLEPRFGDE---VDPADEISKADEAEEKK-----ERTFQFSTKKSEQTAKKEKAL 586
             NKIFRLEPR G     VD    + K ++  E+K     + T  + TKKS   AKK +AL
Sbjct: 129  SNKIFRLEPRVGGSDASVDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQAL 188

Query: 587  RANRDPNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIF 766
                DP +Q DL+ K+ +  +N +ALE ++A   SARNIPP+D +AT P+EAY L+KIIF
Sbjct: 189  NQKDDPRSQKDLDRKLKEVVINKEALESTSA--HSARNIPPYDDTATTPQEAYRLDKIIF 246

Query: 767  KGEWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIK 946
            KGEW YLLDI ++LQ G  V   +Y  FVCNRI K+ E++ E E+  LACI+SYINHL+K
Sbjct: 247  KGEWDYLLDILDLLQAGVEVESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLK 306

Query: 947  FKDKHSMDGFSSAKHHKLPNILTQKFNDMFA-NAESKRLADDKRDLLISYVLVLTLFVDD 1123
            +KD++SMD  SSAKHHK+P IL QKF+ MFA +++S+RL ++K+DLLISYVLVLTL+ D+
Sbjct: 307  YKDRNSMDA-SSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADE 365

Query: 1124 FKTEFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKFP 1267
            F+T+ SDIA+DLRMS+  LR +FE LGCK   +N + +ATLP PL FP
Sbjct: 366  FRTDPSDIARDLRMSAVKLRAHFEHLGCKLVSQNKVTMATLPVPLTFP 413


>ref|XP_022868853.1| DNA-directed RNA polymerase I subunit rpa49-like [Olea europaea var.
            sylvestris]
          Length = 465

 Score =  407 bits (1047), Expect = e-134
 Identities = 211/401 (52%), Positives = 285/401 (71%), Gaps = 9/401 (2%)
 Frame = +2

Query: 89   KRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDK-YSESKTDVKVMKHVKRSNRMQL 265
            K+KK +  +VKI+T+    DK  P+IGYF SGYDP K + E +  VKV ++VK+SNR+Q+
Sbjct: 66   KKKKKEQIDVKIQTIAEKKDKISPVIGYFPSGYDPLKNHGEPEASVKVYRNVKKSNRLQI 125

Query: 266  VVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECNKIF 445
            VV+ +  +         V FVGTNYSGEA A Q+C Y+LGVLDK+T  L+IVP+E NKIF
Sbjct: 126  VVSPHGSQ---------VDFVGTNYSGEATAPQLCKYALGVLDKDTQTLRIVPVESNKIF 176

Query: 446  RLEPRFGDEVDPADEI----SKADEAEEK----KERTFQFSTKKSEQTAKKEKALRANRD 601
            RL P+ G+   P +EI    ++ D AE+K    K+ T  +STKK+ +   K  ALR   D
Sbjct: 177  RLAPKIGEADQPENEILDEANEEDAAEKKASELKKLTLMYSTKKNIRQDVKRDALRQTGD 236

Query: 602  PNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKGEWR 781
            P    DL+ K+ + +   +ALE +A +T ++ NIPP++LSAT P  AYPL+KII KGEW 
Sbjct: 237  PGVHQDLDLKLQEVETIKEALE-AATSTDNSLNIPPYNLSATSPDMAYPLDKIILKGEWD 295

Query: 782  YLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFKDKH 961
            YLLDI EI   G  VT   YP FVCNR+HK+++++ + ++  LA I+SYI HLIKFKDKH
Sbjct: 296  YLLDIFEISCTGGEVTSSIYPRFVCNRVHKLEDIEDDAKKRKLAGIFSYITHLIKFKDKH 355

Query: 962  SMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKTEFS 1141
            SMDG  SAKHHK P+I +QKF+ +FA +   R+ D+K+ LLISYVLVLT+FVD+FK++ S
Sbjct: 356  SMDGVLSAKHHKFPSIFSQKFSSLFATSNDSRIPDEKKKLLISYVLVLTMFVDEFKSDPS 415

Query: 1142 DIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKF 1264
            DIA+DLRM+  ALRP++E+LGCKF REN +++ATLP PL+F
Sbjct: 416  DIAEDLRMTPVALRPHYEYLGCKFRRENQVLVATLPVPLEF 456


>ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nelumbo
            nucifera]
          Length = 406

 Score =  404 bits (1039), Expect = e-134
 Identities = 215/406 (52%), Positives = 286/406 (70%), Gaps = 10/406 (2%)
 Frame = +2

Query: 83   SSKRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYSES-KTDVKVMKHVKRSNRM 259
            S K KK K  +VK+E  +  PDK  P++GYF SG++P +  E   T V+V  +  R NR+
Sbjct: 4    SKKNKKRKRLDVKMEIFHQHPDKIPPLVGYFPSGFNPKRSEEEDSTKVRVYSNKNRPNRL 63

Query: 260  QLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECNK 439
            QLVV+ N+          KV+FVGT+YS EAAA QVC+Y+LGVLDKET  LKIVPI  NK
Sbjct: 64   QLVVSPNSS---------KVEFVGTSYSSEAAAAQVCTYALGVLDKETQTLKIVPIASNK 114

Query: 440  IFRLEPRF-GDEV---DPADEISKADEAEEKK-----ERTFQFSTKKSEQTAKKEKALRA 592
            IFRLEPR  G EV   +P  E+ + D   E+K     + T  + TKKS   AKK ++L+ 
Sbjct: 115  IFRLEPRVRGSEVSDKEPRGELQEEDLTAEQKADKIRDLTNLYGTKKSISRAKKMESLKQ 174

Query: 593  NRDPNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKG 772
              DP +Q  ++ K+    +N  ALE +A  T  ARN+PPHD +AT P +AYPL KIIFKG
Sbjct: 175  KEDPISQDAVDKKIEGFVINKDALETAAVYT--ARNVPPHDPTATTPDKAYPLNKIIFKG 232

Query: 773  EWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFK 952
            EW YLLD+ E+LQ G +++ ++YP FVCNRI+K++E++ E E++ LACI SYI HLIKFK
Sbjct: 233  EWDYLLDVLELLQSGATISSDAYPSFVCNRIYKLEEIQDEMEKKRLACILSYITHLIKFK 292

Query: 953  DKHSMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKT 1132
            D+ S+DG SSAK+HK P I+ QKF  +FAN+E+ RLADDK+DLLISYVLVLTLF+D F T
Sbjct: 293  DQRSVDGASSAKYHKFPPIILQKFLTLFANSETYRLADDKQDLLISYVLVLTLFIDKFST 352

Query: 1133 EFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKFPE 1270
            + SDIAKDLRM+  +LR +++ LGCK +R + +++ TLP PL+FP+
Sbjct: 353  DMSDIAKDLRMTPVSLRLHYQNLGCKLSRVDKLLMVTLPVPLQFPK 398


>gb|PHT45393.1| hypothetical protein CQW23_14551 [Capsicum baccatum]
          Length = 447

 Score =  403 bits (1036), Expect = e-133
 Identities = 214/406 (52%), Positives = 286/406 (70%), Gaps = 12/406 (2%)
 Frame = +2

Query: 89   KRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYSES----KTDVKVMKHVKRSNR 256
            K+KK K T V +ET+   P+   PI+GYF SGYDP K + S    +   K+ ++VKR+NR
Sbjct: 47   KKKKQKHT-VTMETIAENPNNISPIVGYFPSGYDPLKNNNSNGVDELSTKLYRNVKRNNR 105

Query: 257  MQLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECN 436
            +QLVV+ N  +         V FVGTNYSGEAA+ Q+C+YSLGV DK T  L IVPI  N
Sbjct: 106  LQLVVSPNGSQ---------VDFVGTNYSGEAASAQLCTYSLGVFDKGTRTLNIVPIAAN 156

Query: 437  KIFRLEPRF----GDEVDPADEISKADEAEEKKER----TFQFSTKKSEQTAKKEKALRA 592
            KI RLEPR     G E + AD   +   A E+ E+    T  +S+KKS + A+K  +LR 
Sbjct: 157  KILRLEPRVRGSDGPETEDADTCKQELTAVERNEKLRGLTHMYSSKKSIRQAEKLDSLRQ 216

Query: 593  NRDPNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKG 772
              D   Q + +  +A A +N  ALEV A TT +ARN PP+DL+AT P+ AYPLE+II  G
Sbjct: 217  QEDTGNQEEFDRNIAGA-INKDALEV-AVTTDNARNTPPYDLAATTPQLAYPLERIISNG 274

Query: 773  EWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFK 952
            EW YLLD+ ++++ G  +TP+ YP FVCNR +K++ ++ E+E++ LA I+S+I HL+KFK
Sbjct: 275  EWDYLLDVFKLMKAGAEMTPDVYPSFVCNRSYKLEHIQDEDEKKRLAGIFSFITHLVKFK 334

Query: 953  DKHSMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKT 1132
            DKHSMDG SSAKHHK+P IL QKF+ MFA  +SKRL +++++LLI+YVLVLTLF DDF+T
Sbjct: 335  DKHSMDGVSSAKHHKIPGILFQKFSSMFAIPDSKRLPEERKNLLINYVLVLTLFADDFRT 394

Query: 1133 EFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKFPE 1270
            + SDIAKDLRM++ ALRP++E+LGCK  RE N++LATLP PL FP+
Sbjct: 395  DLSDIAKDLRMNAVALRPHYEYLGCKLVREKNVLLATLPVPLTFPD 440


>gb|PHU14311.1| hypothetical protein BC332_15516 [Capsicum chinense]
          Length = 447

 Score =  403 bits (1035), Expect = e-133
 Identities = 212/406 (52%), Positives = 287/406 (70%), Gaps = 12/406 (2%)
 Frame = +2

Query: 89   KRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYSES----KTDVKVMKHVKRSNR 256
            K+KK K T V +ET+   P+   PI+GYF SGYDP K + S    +   K+ ++VKR+NR
Sbjct: 47   KKKKQKHT-VTMETIAENPNNISPIVGYFPSGYDPLKNNNSNGVDELSTKLYRNVKRNNR 105

Query: 257  MQLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECN 436
            +QLVV+ N  +         V FVGTNYSGEAA+ Q+C+YSLGV DK T  L IVPI  N
Sbjct: 106  LQLVVSPNGSQ---------VDFVGTNYSGEAASAQLCTYSLGVFDKGTQTLNIVPIAAN 156

Query: 437  KIFRLEPRF----GDEVDPAD----EISKADEAEEKKERTFQFSTKKSEQTAKKEKALRA 592
            KI RLEPR     G E + AD    E++  +  E+ +  T  +S+KKS + A+K  +LR 
Sbjct: 157  KILRLEPRVRGSDGPETEDADTGKQELTAVERDEKLRGLTHMYSSKKSIRQAEKLDSLRQ 216

Query: 593  NRDPNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKG 772
              D   Q + +  +A A +N  ALE+ A TT +ARN PP+DL+AT P+ AYPLE+II  G
Sbjct: 217  QEDTGNQEEFDRNIAGA-INKDALEI-AVTTDNARNTPPYDLAATTPQLAYPLERIISNG 274

Query: 773  EWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFK 952
            EW YLLD+ ++++ G  +TP+ YP FVCNR +K++ ++ E+E++ LA I+S+I HL+KFK
Sbjct: 275  EWDYLLDVFKLMKAGAEMTPDVYPSFVCNRSYKLEHIQDEDEKKRLAGIFSFITHLVKFK 334

Query: 953  DKHSMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKT 1132
            DKHSMDG SSAKHHK+P IL QKF+ MFA  +SKRL +++++LLI+YVLVLTLF DDF+T
Sbjct: 335  DKHSMDGVSSAKHHKIPGILFQKFSSMFAIPDSKRLPEERKNLLINYVLVLTLFADDFRT 394

Query: 1133 EFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKFPE 1270
            + SDIAKDLRM++ ALRP++E+LGCK  RE N++LATLP PL FP+
Sbjct: 395  DLSDIAKDLRMNAVALRPHYEYLGCKLVREKNVLLATLPVPLTFPD 440


>ref|XP_022842785.1| DNA-directed RNA polymerase I subunit rpa49-like [Olea europaea var.
            sylvestris]
          Length = 438

 Score =  402 bits (1033), Expect = e-133
 Identities = 211/401 (52%), Positives = 282/401 (70%), Gaps = 9/401 (2%)
 Frame = +2

Query: 89   KRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDK-YSESKTDVKVMKHVKRSNRMQL 265
            K+KK +  NVK+ET+    DK  PIIGYF SGYDP K +SE +  VKV ++VK+SNR+Q+
Sbjct: 39   KKKKREQINVKVETVAEKKDKISPIIGYFPSGYDPLKNHSEPEASVKVYRNVKKSNRLQM 98

Query: 266  VVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECNKIF 445
            VV+ +  +         V FVGTNYSGEA A Q+C Y+LGVLDK+T  L+IVPIE NKIF
Sbjct: 99   VVSPHGSQ---------VDFVGTNYSGEATAPQLCKYALGVLDKDTQTLRIVPIESNKIF 149

Query: 446  RLEPRFG----DEVDPADEISKADEAEEK----KERTFQFSTKKSEQTAKKEKALRANRD 601
            RL P+ G     E +  DE ++ D  E+K    K+ T  +STKK+ +   K  ALR   D
Sbjct: 150  RLAPKIGAADQTEKEILDEANEEDATEKKANELKKLTLMYSTKKNIRQDVKRDALRQTGD 209

Query: 602  PNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKGEWR 781
            P    DL+ K+ + +   +AL+ +A +T ++ NIPP++L AT P  AYPL+KII KGEW 
Sbjct: 210  PGVHQDLDLKLQEVETIKEALQ-AATSTDNSLNIPPYNLFATSPDMAYPLDKIILKGEWD 268

Query: 782  YLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFKDKH 961
            YLLDI EI   G  V P  YP FV NR+HK+++++ + ++  LA I+SYI HLIKFKDKH
Sbjct: 269  YLLDIFEISCTGGEVAPSIYPRFVRNRVHKLEDIEDDAKKRKLAGIFSYITHLIKFKDKH 328

Query: 962  SMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKTEFS 1141
            SMDG  SAKHHK P+I +QKF+ +FA +   R+ D+K+ LLISYVLVLT+FVD+FK++ S
Sbjct: 329  SMDGVLSAKHHKFPSIFSQKFSSLFATSNDSRIPDEKKKLLISYVLVLTMFVDEFKSDPS 388

Query: 1142 DIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKF 1264
            DIA+DLRM+  ALRP++E+LGCKF REN +++ATLP PL+F
Sbjct: 389  DIAEDLRMTPVALRPHYEYLGCKFRRENQVLVATLPVPLEF 429


>ref|XP_016575329.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Capsicum
            annuum]
 gb|PHT78612.1| hypothetical protein T459_16664 [Capsicum annuum]
          Length = 448

 Score =  402 bits (1033), Expect = e-132
 Identities = 210/406 (51%), Positives = 285/406 (70%), Gaps = 12/406 (2%)
 Frame = +2

Query: 89   KRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYSES----KTDVKVMKHVKRSNR 256
            K+KK +   V +ET+   P+   PI+GYF SGYDP K + S    +   K+ ++VKR+NR
Sbjct: 47   KKKKKQKHTVTMETIAENPNNISPIVGYFPSGYDPLKNNNSNGVDELSTKLYRNVKRNNR 106

Query: 257  MQLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECN 436
            +QLVV+ N  +         V FVGTNYSGEAA+ Q+C+YSLGV DK T  L IVPI  N
Sbjct: 107  LQLVVSPNGSQ---------VDFVGTNYSGEAASAQLCAYSLGVFDKGTRTLNIVPIAAN 157

Query: 437  KIFRLEPRF----GDEVDPAD----EISKADEAEEKKERTFQFSTKKSEQTAKKEKALRA 592
            KI RLEPR     G E + AD    E++  +  E+ +  T  +S+KKS + A+K  +LR 
Sbjct: 158  KILRLEPRVRGSDGPETEDADTGKQELTAVERDEKLRGLTHMYSSKKSIRQAEKLDSLRR 217

Query: 593  NRDPNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKG 772
              D   Q + +  +A A +N  ALE+ A TT +ARN PP+DL+AT P+ AYPLE+II  G
Sbjct: 218  QEDTGNQEEFDRNIAGA-INKDALEI-AVTTDNARNTPPYDLAATTPQLAYPLERIISNG 275

Query: 773  EWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFK 952
            EW YLLD+ ++++ G  +TP  YP FVCNR +K++ ++ E+E++ LA I+S+I HL+KFK
Sbjct: 276  EWDYLLDVFKLMKAGAEMTPGVYPSFVCNRSYKLEHIQDEDEKKRLAGIFSFITHLVKFK 335

Query: 953  DKHSMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKT 1132
            DKHSMDG SSAKHHK+P IL QKF+ MFA  +SKRL +++++LLI+YVLVLTLF DDF+T
Sbjct: 336  DKHSMDGVSSAKHHKIPGILFQKFSSMFAIPDSKRLPEERKNLLINYVLVLTLFADDFRT 395

Query: 1133 EFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKFPE 1270
            + SDIAKDLRM++ ALRP++E+LGCK  RE N++LATLP PL FP+
Sbjct: 396  DLSDIAKDLRMNAVALRPHYEYLGCKLVREKNVLLATLPVPLTFPD 441


>ref|XP_006350715.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Solanum
            tuberosum]
          Length = 431

 Score =  400 bits (1029), Expect = e-132
 Identities = 213/407 (52%), Positives = 287/407 (70%), Gaps = 13/407 (3%)
 Frame = +2

Query: 86   SKRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDP-----DKYSESKTDVKVMKHVKRS 250
            +K+KK +   V +ET+   P+   PI+GYF SGYDP     D   E  T  K+ ++ KR+
Sbjct: 30   TKKKKKETHTVTMETIAENPNNISPIVGYFPSGYDPLTNNNDGVEELST--KLYRNAKRN 87

Query: 251  NRMQLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIE 430
            NR+QLVV+ N  +         V FVGTNYSGEA + Q+C+YSLG+LDKET  LKIVPI 
Sbjct: 88   NRLQLVVSPNGSQ---------VDFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIA 138

Query: 431  CNKIFRLEPRFG-------DEVDPADEISKADEAEEK-KERTFQFSTKKSEQTAKKEKAL 586
             NKI RLEPR         ++ D A +   A+E  +K +E T ++S+KK+ + A+K  +L
Sbjct: 139  ANKIIRLEPRVRGLEAQETEDPDTAKQELTAEERNDKMRELTQKYSSKKTIRQARKLDSL 198

Query: 587  RANRDPNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIF 766
            R   D   Q + +  +A A +N +ALEV+ AT  SARNIPPHDL ATIP+ AYPL++II 
Sbjct: 199  RQQEDTGNQEEFDRNIAGA-INKEALEVAVAT-DSARNIPPHDLDATIPQLAYPLDRIIS 256

Query: 767  KGEWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIK 946
            KGEW +LLDI E+ + G  +TP+ YP FVCNR +K++ ++ E+E++ LA I+S+I HL+K
Sbjct: 257  KGEWDFLLDIFELTEAGAEMTPDLYPSFVCNRSYKLEHIQDEDEKKRLAGIFSFITHLVK 316

Query: 947  FKDKHSMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDF 1126
            FKDKHSMDG SSAKHHK P IL+QKF  MF+ ++SKRL ++K  LLI+YVLVLTLF DDF
Sbjct: 317  FKDKHSMDGVSSAKHHKFPGILSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDF 376

Query: 1127 KTEFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKFP 1267
            +++ SDIAKDLR+++ ALRP++E+LGCK  RE N++LATLP PL FP
Sbjct: 377  RSDPSDIAKDLRINAVALRPFYEYLGCKLVREKNVVLATLPVPLVFP 423


>gb|PIN22299.1| RNA polymerase I 49 kDa subunit [Handroanthus impetiginosus]
          Length = 450

 Score =  401 bits (1030), Expect = e-132
 Identities = 212/414 (51%), Positives = 281/414 (67%), Gaps = 20/414 (4%)
 Frame = +2

Query: 83   SSKRKKTKPTNVKIETLNPTPD-KSLPIIGYFSSGYDP-------DKYSESKTDVKVMKH 238
            S K  K +P +VKI+ +   PD KS P++GYF SGYDP       D  S+  +DV++ K+
Sbjct: 38   SKKGGKFEPLDVKIKMVGENPDHKSPPVVGYFPSGYDPLKNVEASDSKSDPSSDVRIYKN 97

Query: 239  VKRSN----RMQLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETG 406
                N    RMQLVV  N  +         + FVGTNYSGEA   Q+C+Y+LGVLDKETG
Sbjct: 98   ANSRNPKNPRMQLVVGVNGSQ---------MNFVGTNYSGEATTPQLCNYALGVLDKETG 148

Query: 407  VLKIVPIECNKIFRLEPRFG-------DEVDPA-DEISKADEAEEKKERTFQFSTKKSEQ 562
            VLK+VPI  N+IFRLEP+ G       +++D A +E+S+ ++AE+ +  T  +STKK  +
Sbjct: 149  VLKMVPIAANRIFRLEPKIGRSELRENEQLDEAKEEVSREEKAEKFRNLTVMYSTKKDIR 208

Query: 563  TAKKEKALRANRDPNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEA 742
               K +ALR    P  Q D + K+   ++  +ALE  A+TT+ ARN+PP+D+ A  P  A
Sbjct: 209  RDLKREALRQTEGPGTQEDADQKLKGIEIKTEALEAIASTTN-ARNVPPYDMGAASPDMA 267

Query: 743  YPLEKIIFKGEWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIY 922
            YPL+KII KGEW YLLDI E+ Q G  VTP+ YP FVCNRI K+++++ E +++ +A I 
Sbjct: 268  YPLDKIILKGEWDYLLDIFELAQAGAEVTPDVYPSFVCNRIVKLEDIEDESKKKRIAGIL 327

Query: 923  SYINHLIKFKDKHSMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLV 1102
            SYI HLIKFKD HSMDG SSAK HKLP+IL+QKF  MF      R+ D+K+ LLISYVLV
Sbjct: 328  SYITHLIKFKDGHSMDGVSSAKRHKLPSILSQKFTSMFGGTNDTRIPDEKQKLLISYVLV 387

Query: 1103 LTLFVDDFKTEFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKF 1264
            L+LF DDF+++  DIAKDLRMS   LRP++E+LGCKF REN ++LATLP PL+F
Sbjct: 388  LSLFADDFRSDPLDIAKDLRMSPIMLRPHYEYLGCKFVRENQVLLATLPVPLEF 441


>ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Eucalyptus
            grandis]
 gb|KCW69807.1| hypothetical protein EUGRSUZ_F03167 [Eucalyptus grandis]
          Length = 415

 Score =  397 bits (1020), Expect = e-131
 Identities = 209/408 (51%), Positives = 277/408 (67%), Gaps = 14/408 (3%)
 Frame = +2

Query: 89   KRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYS-------ESKTDVKVMKHVKR 247
            K++  +  +  I  L  + DK  P++GYF SG+DP             +  V+V ++ K 
Sbjct: 12   KKRPREKLSATIHALPDSADKIPPLVGYFPSGFDPSSGGGGGGGDPPEEPGVRVYRNGKW 71

Query: 248  SNRMQLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPI 427
             NR+QLVV               V FVG++ SGE    Q C+Y+LGVLDKE+  LK+VPI
Sbjct: 72   PNRLQLVVR---------PPESNVTFVGSSSSGEYTGVQSCTYALGVLDKESQTLKVVPI 122

Query: 428  ECNKIFRLEPRFGDEVDPAD-------EISKADEAEEKKERTFQFSTKKSEQTAKKEKAL 586
             CNKIFRLEPR   ++   +       EIS  ++A++ +E    F TK+S    KK ++L
Sbjct: 123  ACNKIFRLEPRVASDLPEEEPPELGRGEISAKEKADKVRELNLLFGTKRSVTQDKKMQSL 182

Query: 587  RANRDPNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIF 766
            R   DPN+Q DL+ K+ +  +N +ALE + A    ARNIPP++ SAT+PK+AYPLEKII 
Sbjct: 183  RQEDDPNSQKDLDRKIKEVAINKEALESTDAHI--ARNIPPYNSSATVPKDAYPLEKIIL 240

Query: 767  KGEWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIK 946
            KGEW Y+ DI + L+EG+ V+P++YP FVCNRIHK+ E++ E E+E L CI SYINHLIK
Sbjct: 241  KGEWDYIKDIFQFLEEGQKVSPDAYPTFVCNRIHKLGEMQDEMEKETLGCILSYINHLIK 300

Query: 947  FKDKHSMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDF 1126
            FKD+HS DG SS+K+HK+P+IL QKF+ MF+NAESK L  +K DLLISYVLVLTLF DDF
Sbjct: 301  FKDQHSADGASSSKNHKIPSILRQKFSTMFSNAESKWLPSEKIDLLISYVLVLTLFADDF 360

Query: 1127 KTEFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKFPE 1270
            +T+ +DIAKDLRMSS  +R +FE LGCKF+RE N++ A LP PLKFPE
Sbjct: 361  RTDPTDIAKDLRMSSVTIRQHFEHLGCKFSREKNVLYAKLPVPLKFPE 408


>ref|XP_004240985.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Solanum
            lycopersicum]
          Length = 410

 Score =  394 bits (1013), Expect = e-130
 Identities = 212/405 (52%), Positives = 286/405 (70%), Gaps = 11/405 (2%)
 Frame = +2

Query: 86   SKRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYSESKTD---VKVMKHVKRSNR 256
            SK+KK +   V +ET+   P+   P++GYF SGYDP + +    +    K+ ++V+R+NR
Sbjct: 9    SKKKKKETHTVTMETIAENPNNISPMVGYFPSGYDPLRNTNDGVEELSTKLYRNVRRNNR 68

Query: 257  MQLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECN 436
            +Q+VV+    +         V FVGTNYSGEA + Q+C+YSLG+LDKET  LKIVPI  N
Sbjct: 69   LQVVVSPYGSQ---------VDFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAAN 119

Query: 437  KIFRLEPRF-GDEVDPADEISKADE---AEEK----KERTFQFSTKKSEQTAKKEKALRA 592
            KI RLEPR  G EV  A++   A +   AEE+    +E T  +S+KKS + A+K  +LR 
Sbjct: 120  KIIRLEPRVRGSEVPDAEDPDTAKQELTAEERNDKMRELTQMYSSKKSIRQARKLDSLRQ 179

Query: 593  NRDPNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKG 772
              D   Q + +  +A A +N +ALEV+ AT  SARNIPPHDL ATIP+ AYPL++II KG
Sbjct: 180  QEDTGNQEEFDRNIAGA-INKEALEVTVAT-DSARNIPPHDLDATIPQLAYPLDRIISKG 237

Query: 773  EWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFK 952
            EW +LLDI E+ + G  +TP+ YP FV NR +K++ ++ E+E++ LA I S+I HL+KFK
Sbjct: 238  EWDFLLDIFELTEAGAEMTPDLYPSFVRNRSYKLEHIQDEDEKKRLAGILSFITHLVKFK 297

Query: 953  DKHSMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKT 1132
            DKHSMDG SSAKHHK P IL+QKF  MF+ ++SKRL ++K  LLI+YVLVLTLF DDF++
Sbjct: 298  DKHSMDGVSSAKHHKFPGILSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRS 357

Query: 1133 EFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKFP 1267
            + SDIAKDLR+++ ALRP++E+LGCK  RE NI+LATLP PL FP
Sbjct: 358  DPSDIAKDLRINAVALRPFYEYLGCKLVREKNIVLATLPVPLVFP 402


>emb|CBI35920.3| unnamed protein product, partial [Vitis vinifera]
          Length = 391

 Score =  392 bits (1006), Expect = e-129
 Identities = 210/395 (53%), Positives = 280/395 (70%), Gaps = 13/395 (3%)
 Frame = +2

Query: 122  IETLNPTPDKSLPIIGYFSSGYDPDKYSESKTD----VKVMKHVKRSNRMQLVVTCNNGE 289
            +E ++  P+K  P++GYF SG+DP K  + ++D    VKV ++  R+NR+QLVV+ N+  
Sbjct: 1    MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSPNDS- 59

Query: 290  SXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECNKIFRLEPRFGD 469
                    KV FVGT+YSGEAA+ QVC+Y+LGVLDKET  LKIVPI  NKIFRLEPR G 
Sbjct: 60   --------KVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGG 111

Query: 470  E---VDPADEISKADEAEEKK-----ERTFQFSTKKSEQTAKKEKALRANRDPNAQADLN 625
                VD    + K ++  E+K     + T  + TKKS   AKK +AL    DP +Q DL+
Sbjct: 112  SDASVDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLD 171

Query: 626  SKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKGEWRYLLDIAEI 805
             K+ +  +N +ALE ++A   SARNIPP+D +AT P+EAY L+KIIFKGEW YLLDI ++
Sbjct: 172  RKLKEVVINKEALESTSA--HSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDL 229

Query: 806  LQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFKDKHSMDGFSSA 985
            LQ G  V   +Y  FVCNRI K+ E++ E E+  LACI+SYINHL+K+KD++SMD  SSA
Sbjct: 230  LQAGVEVESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSA 288

Query: 986  KHHKLPNILTQKFNDMFA-NAESKRLADDKRDLLISYVLVLTLFVDDFKTEFSDIAKDLR 1162
            KHHK+P IL QKF+ MFA +++S+RL ++K+DLLISYVLVLTL+ D+F+T+ SDIA+DLR
Sbjct: 289  KHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLR 348

Query: 1163 MSSGALRPYFEFLGCKFTRENNIMLATLPAPLKFP 1267
            MS+  LR +FE LGCK   +N + +ATLP PL FP
Sbjct: 349  MSAVKLRAHFEHLGCKLVSQNKVTMATLPVPLTFP 383


>ref|XP_015077190.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Solanum
            pennellii]
          Length = 432

 Score =  393 bits (1009), Expect = e-129
 Identities = 212/405 (52%), Positives = 284/405 (70%), Gaps = 11/405 (2%)
 Frame = +2

Query: 86   SKRKKTKPTNVKIETLNPTPDKSLPIIGYFSSGYDPDKYSESKTD---VKVMKHVKRSNR 256
            +K+KK +   V +ET+   P+   PI+GYF SGYDP + +    +    K  ++VKR+NR
Sbjct: 31   TKKKKKETHTVTMETIAENPNNISPIVGYFPSGYDPLRNTNDGVEELSTKFYRNVKRNNR 90

Query: 257  MQLVVTCNNGESXXXXXXXKVKFVGTNYSGEAAAQQVCSYSLGVLDKETGVLKIVPIECN 436
            +Q+VV+    +         V FVGTNYSGEA + Q+C+YSLG+LDKET  LKIVPI  N
Sbjct: 91   LQVVVSPYGSQ---------VDFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAAN 141

Query: 437  KIFRLEPRF-GDEVDPADEISKADE---AEEK----KERTFQFSTKKSEQTAKKEKALRA 592
            KI RLEPR  G EV  A++   A +   AEE+    +E T  +S+KKS + A+K  +LR 
Sbjct: 142  KIIRLEPRVRGSEVPDAEDPDTAKQELTAEERNDKMRELTQMYSSKKSIRQARKLDSLRQ 201

Query: 593  NRDPNAQADLNSKMADAKVNAKALEVSAATTSSARNIPPHDLSATIPKEAYPLEKIIFKG 772
              D   Q + +  +A A +N +ALEV+ AT  SARNIPPHDL ATIP+ AYPL++II KG
Sbjct: 202  QEDTGNQEEFDRNIAGA-INKEALEVTVAT-DSARNIPPHDLDATIPQLAYPLDRIISKG 259

Query: 773  EWRYLLDIAEILQEGKSVTPESYPVFVCNRIHKIDEVKGEEERENLACIYSYINHLIKFK 952
            EW +LLDI E+ + G  + P+ YP FV NR +K++ ++ E+E++ LA I S+I HL+KFK
Sbjct: 260  EWDFLLDIFELTEAGAEMAPDLYPSFVRNRSYKLEHIQDEDEKKRLAGILSFITHLVKFK 319

Query: 953  DKHSMDGFSSAKHHKLPNILTQKFNDMFANAESKRLADDKRDLLISYVLVLTLFVDDFKT 1132
            DKHSMDG SSAKHHK P IL+QKF  MF+ ++SKRL ++K  LLI+YVLVLTLF DDF++
Sbjct: 320  DKHSMDGVSSAKHHKFPGILSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRS 379

Query: 1133 EFSDIAKDLRMSSGALRPYFEFLGCKFTRENNIMLATLPAPLKFP 1267
            + SDIAKDLR+++ ALRP++E+LGCK  RE NI+LATLP PL FP
Sbjct: 380  DPSDIAKDLRINAVALRPFYEYLGCKLVREKNIVLATLPVPLVFP 424