BLASTX nr result

ID: Chrysanthemum21_contig00018623 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00018623
         (385 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI07232.1| Nucleic acid-binding, OB-fold [Cynara cardunculus...    62   2e-08
ref|XP_023770861.1| uncharacterized protein LOC111919532 [Lactuc...    59   2e-07
gb|PHU20172.1| hypothetical protein BC332_11323 [Capsicum chinense]    57   8e-07
ref|XP_016556093.1| PREDICTED: uncharacterized protein LOC107855...    57   8e-07
ref|XP_006359028.1| PREDICTED: 30S ribosomal protein S1 homolog ...    57   8e-07
emb|CBI29366.3| unnamed protein product, partial [Vitis vinifera]      56   2e-06
ref|XP_015073782.1| PREDICTED: 30S ribosomal protein S1 homolog ...    56   2e-06
ref|XP_004253265.1| PREDICTED: uncharacterized protein LOC101263...    56   2e-06
ref|XP_002263508.2| PREDICTED: uncharacterized protein LOC100240...    56   2e-06

>gb|KVI07232.1| Nucleic acid-binding, OB-fold [Cynara cardunculus var. scolymus]
          Length = 503

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = +1

Query: 1   RLSTDALPFNDEENMYANWKWFKFEQDNGPK 93
           +L +D LPFNDEENMYANWKWFKFE DN PK
Sbjct: 473 QLQSDGLPFNDEENMYANWKWFKFEVDNQPK 503


>ref|XP_023770861.1| uncharacterized protein LOC111919532 [Lactuca sativa]
 gb|PLY79972.1| hypothetical protein LSAT_9X42380 [Lactuca sativa]
          Length = 504

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +1

Query: 10  TDALPFNDEENMYANWKWFKFEQDNGPK 93
           +DALPFN EENMYANWKWFKFE+DN PK
Sbjct: 477 SDALPFNVEENMYANWKWFKFERDNEPK 504


>gb|PHU20172.1| hypothetical protein BC332_11323 [Capsicum chinense]
          Length = 513

 Score = 57.0 bits (136), Expect = 8e-07
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = +1

Query: 4   LSTDALPFNDEENMYANWKWFKFEQDN 84
           L TD LPF DEENMYANWKWFKFE+DN
Sbjct: 483 LPTDRLPFEDEENMYANWKWFKFERDN 509


>ref|XP_016556093.1| PREDICTED: uncharacterized protein LOC107855591 [Capsicum annuum]
 gb|PHT84056.1| hypothetical protein T459_12499 [Capsicum annuum]
          Length = 513

 Score = 57.0 bits (136), Expect = 8e-07
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = +1

Query: 4   LSTDALPFNDEENMYANWKWFKFEQDN 84
           L TD LPF DEENMYANWKWFKFE+DN
Sbjct: 483 LPTDRLPFEDEENMYANWKWFKFERDN 509


>ref|XP_006359028.1| PREDICTED: 30S ribosomal protein S1 homolog A [Solanum tuberosum]
          Length = 513

 Score = 57.0 bits (136), Expect = 8e-07
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = +1

Query: 4   LSTDALPFNDEENMYANWKWFKFEQDN 84
           L TD LPF DEENMYANWKWFKFE+DN
Sbjct: 483 LPTDRLPFEDEENMYANWKWFKFERDN 509


>emb|CBI29366.3| unnamed protein product, partial [Vitis vinifera]
          Length = 435

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 21/29 (72%), Positives = 27/29 (93%)
 Frame = +1

Query: 4   LSTDALPFNDEENMYANWKWFKFEQDNGP 90
           L TDALPF+DE ++YANW+WFKFE+D+GP
Sbjct: 406 LPTDALPFHDEASLYANWRWFKFERDDGP 434


>ref|XP_015073782.1| PREDICTED: 30S ribosomal protein S1 homolog A [Solanum pennellii]
          Length = 513

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = +1

Query: 4   LSTDALPFNDEENMYANWKWFKFEQDN 84
           L TD LPF DEENMYANWKWFKF++DN
Sbjct: 483 LPTDRLPFEDEENMYANWKWFKFDRDN 509


>ref|XP_004253265.1| PREDICTED: uncharacterized protein LOC101263198 [Solanum
           lycopersicum]
          Length = 513

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = +1

Query: 4   LSTDALPFNDEENMYANWKWFKFEQDN 84
           L TD LPF DEENMYANWKWFKF++DN
Sbjct: 483 LPTDRLPFEDEENMYANWKWFKFDRDN 509


>ref|XP_002263508.2| PREDICTED: uncharacterized protein LOC100240915 [Vitis vinifera]
          Length = 513

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 21/29 (72%), Positives = 27/29 (93%)
 Frame = +1

Query: 4   LSTDALPFNDEENMYANWKWFKFEQDNGP 90
           L TDALPF+DE ++YANW+WFKFE+D+GP
Sbjct: 484 LPTDALPFHDEASLYANWRWFKFERDDGP 512


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