BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00018582
         (447 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH91705.1| Zinc finger, RING/FYVE/PHD-type [Cynara carduncul...    64   5e-09
ref|XP_023753927.1| RING-H2 finger protein ATL2 [Lactuca sativa]...    59   2e-07

>gb|KVH91705.1| Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus var. scolymus]
          Length = 303

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 35/68 (51%), Positives = 40/68 (58%)
 Frame = +1

Query: 244 MSVADTNVEPTTQNRWRNQGQEQEEVASKSYALSGKIMLASIIXXXXXXXXXXXXHLYAR 423
           M+   T V+P   ++WR     + E  S SYALSGKIMLASII            HLYAR
Sbjct: 1   MAADGTTVDPPNNSQWREM---EGEPNSNSYALSGKIMLASIIVLFVVVVFLVLLHLYAR 57

Query: 424 WYLLRLQR 447
           WYLLRLQR
Sbjct: 58  WYLLRLQR 65


>ref|XP_023753927.1| RING-H2 finger protein ATL2 [Lactuca sativa]
 gb|PLY99169.1| hypothetical protein LSAT_6X78761 [Lactuca sativa]
          Length = 300

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 33/68 (48%), Positives = 41/68 (60%)
 Frame = +1

Query: 244 MSVADTNVEPTTQNRWRNQGQEQEEVASKSYALSGKIMLASIIXXXXXXXXXXXXHLYAR 423
           MS     V+   + +W   G + EE +SK+YALSGKIML+SII            HLYAR
Sbjct: 1   MSATGPTVDSPVKPQW---GFDGEEDSSKNYALSGKIMLSSIIVLFVVVVFLVLLHLYAR 57

Query: 424 WYLLRLQR 447
           WYLLRL+R
Sbjct: 58  WYLLRLRR 65