BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00018500
         (1364 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022039572.1| probable RNA polymerase II transcription fac...   592   0.0  
ref|XP_022039573.1| probable RNA polymerase II transcription fac...   585   0.0  
ref|XP_023733246.1| probable RNA polymerase II transcription fac...   569   0.0  
gb|PLY74266.1| hypothetical protein LSAT_1X66020 [Lactuca sativa]     565   0.0  
ref|XP_023734834.1| probable RNA polymerase II transcription fac...   560   0.0  
gb|KVH99257.1| BSD-like protein [Cynara cardunculus var. scolymus]    557   0.0  
ref|XP_023734836.1| probable RNA polymerase II transcription fac...   535   0.0  
ref|XP_017252565.1| PREDICTED: probable RNA polymerase II transc...   484   e-163
emb|CDP20682.1| unnamed protein product [Coffea canephora]            474   e-160
gb|KZM94354.1| hypothetical protein DCAR_017597 [Daucus carota s...   473   e-159
ref|XP_022039574.1| probable RNA polymerase II transcription fac...   467   e-159
gb|PHT35492.1| putative RNA polymerase II transcription factor B...   468   e-157
ref|XP_011097708.1| probable RNA polymerase II transcription fac...   467   e-157
ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transc...   465   e-157
gb|PHU04081.1| putative RNA polymerase II transcription factor B...   466   e-157
ref|XP_016545480.1| PREDICTED: probable RNA polymerase II transc...   466   e-157
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   465   e-156
ref|XP_022873357.1| probable RNA polymerase II transcription fac...   460   e-154
ref|XP_019251833.1| PREDICTED: probable RNA polymerase II transc...   457   e-153
ref|XP_009602018.1| PREDICTED: probable RNA polymerase II transc...   457   e-153

>ref|XP_022039572.1| probable RNA polymerase II transcription factor B subunit 1-1 isoform
            X1 [Helianthus annuus]
 gb|OTG26581.1| hypothetical protein HannXRQ_Chr05g0160211 [Helianthus annuus]
          Length = 593

 Score =  592 bits (1526), Expect = 0.0
 Identities = 299/380 (78%), Positives = 329/380 (86%), Gaps = 1/380 (0%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGGYF 960
            PGV GILKMTRERF F+PNDPS S  LNV+FRLI           +PALLN+T+DQG Y 
Sbjct: 19   PGVRGILKMTRERFVFQPNDPSLSVKLNVEFRLIKGHKSSKEGANRPALLNLTQDQGNYI 78

Query: 959  FEFENFPDRELCRDFVAKAIIANTSG-ASEKATPPNNEQLSSAEMQRRIKLLQEDSELQK 783
            FEFENF DRE+CRDFVAKAI     G  SEK+ P  +EQLSSAEM+RRIKLLQEDSELQK
Sbjct: 79   FEFENFSDREICRDFVAKAIAGEVGGPTSEKSVPHKDEQLSSAEMERRIKLLQEDSELQK 138

Query: 782  LHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNKVTFS 603
            LH+QFV+GGVLSETEFWATRKKL+DVNASR+ KQRVGLKS+M FNVKPSSDGQSN+VTF+
Sbjct: 139  LHKQFVIGGVLSETEFWATRKKLLDVNASRKAKQRVGLKSEMIFNVKPSSDGQSNRVTFN 198

Query: 602  LTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXXXXXX 423
            LTPEMIHQIFAEKPAVRQAY+NFVPNKMTE+DFWTKYWRAQYLHS +NIV          
Sbjct: 199  LTPEMIHQIFAEKPAVRQAYINFVPNKMTEKDFWTKYWRAQYLHSTKNIVAAAAEAAEDE 258

Query: 422  XXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEAQYEP 243
              AVFL+QD ILASETRQKIR+VDPTLDMEADEGDDYTHIPGHGLA E+ KDELEAQYEP
Sbjct: 259  ELAVFLRQDAILASETRQKIRKVDPTLDMEADEGDDYTHIPGHGLANEDIKDELEAQYEP 318

Query: 242  FKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQERLDR 63
            +KRSF+QDINRHAAVVLEGRTIDVET DTRTVAEALASSKRVELAKEAS+GN  Q+R+DR
Sbjct: 319  YKRSFLQDINRHAAVVLEGRTIDVETGDTRTVAEALASSKRVELAKEASDGNSHQDRIDR 378

Query: 62   ISRMSEIEDLQAPREPPVAP 3
            + RM+EIEDLQAPR+PPVAP
Sbjct: 379  MIRMAEIEDLQAPRDPPVAP 398


>ref|XP_022039573.1| probable RNA polymerase II transcription factor B subunit 1-1 isoform
            X2 [Helianthus annuus]
          Length = 592

 Score =  585 bits (1509), Expect = 0.0
 Identities = 298/380 (78%), Positives = 328/380 (86%), Gaps = 1/380 (0%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGGYF 960
            PGV GILKMTRERF F+PNDPS S  LNV+FRLI           +PALLN+T+DQG Y 
Sbjct: 19   PGVRGILKMTRERFVFQPNDPSLSVKLNVEFRLIKGHKSSKEGANRPALLNLTQDQGNYI 78

Query: 959  FEFENFPDRELCRDFVAKAIIANTSG-ASEKATPPNNEQLSSAEMQRRIKLLQEDSELQK 783
            FEFENF DRE+CRDFVAKAI     G  SEK+ P  +EQLSSAEM+RRIKLLQEDSELQK
Sbjct: 79   FEFENFSDREICRDFVAKAIAGEVGGPTSEKSVPHKDEQLSSAEMERRIKLLQEDSELQK 138

Query: 782  LHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNKVTFS 603
            LH+QFV+GGVLSETEFWATRK L+DVNASR+ KQRVGLKS+M FNVKPSSDGQSN+VTF+
Sbjct: 139  LHKQFVIGGVLSETEFWATRK-LLDVNASRKAKQRVGLKSEMIFNVKPSSDGQSNRVTFN 197

Query: 602  LTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXXXXXX 423
            LTPEMIHQIFAEKPAVRQAY+NFVPNKMTE+DFWTKYWRAQYLHS +NIV          
Sbjct: 198  LTPEMIHQIFAEKPAVRQAYINFVPNKMTEKDFWTKYWRAQYLHSTKNIVAAAAEAAEDE 257

Query: 422  XXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEAQYEP 243
              AVFL+QD ILASETRQKIR+VDPTLDMEADEGDDYTHIPGHGLA E+ KDELEAQYEP
Sbjct: 258  ELAVFLRQDAILASETRQKIRKVDPTLDMEADEGDDYTHIPGHGLANEDIKDELEAQYEP 317

Query: 242  FKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQERLDR 63
            +KRSF+QDINRHAAVVLEGRTIDVET DTRTVAEALASSKRVELAKEAS+GN  Q+R+DR
Sbjct: 318  YKRSFLQDINRHAAVVLEGRTIDVETGDTRTVAEALASSKRVELAKEASDGNSHQDRIDR 377

Query: 62   ISRMSEIEDLQAPREPPVAP 3
            + RM+EIEDLQAPR+PPVAP
Sbjct: 378  MIRMAEIEDLQAPRDPPVAP 397


>ref|XP_023733246.1| probable RNA polymerase II transcription factor B subunit 1-3
            [Lactuca sativa]
 ref|XP_023733247.1| probable RNA polymerase II transcription factor B subunit 1-3
            [Lactuca sativa]
          Length = 606

 Score =  569 bits (1467), Expect = 0.0
 Identities = 300/387 (77%), Positives = 325/387 (83%), Gaps = 8/387 (2%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGGYF 960
            PGV G LKMTRERF F PNDPS S  LNV+FRLI           +PALLN+T+DQG Y 
Sbjct: 19   PGVRGTLKMTRERFVFMPNDPSSSIRLNVEFRLIKGHKSSKEGSNRPALLNLTQDQGNYI 78

Query: 959  FEFENFPDRELCRDFVAKAIIANTSGASEKATP--PNNEQLSSAEMQRRIKLLQEDSELQ 786
            FEFENF DRELCRDFVAKAI     G SEKA P    +EQLSSAEM+RRIKLLQEDSELQ
Sbjct: 79   FEFENFSDRELCRDFVAKAITFYGEGGSEKAVPLPHKDEQLSSAEMERRIKLLQEDSELQ 138

Query: 785  KLHQQFVMGGVLSETEFWATRKKLVDVN---ASRRVKQRVGLKSDMTFNVKPSSDGQSNK 615
            KLH+QFVMGGVLSETEFWATRKKL+DVN   +SR+ KQRVGLKSDM FNVKPSSDGQSNK
Sbjct: 139  KLHKQFVMGGVLSETEFWATRKKLLDVNNTSSSRKAKQRVGLKSDMIFNVKPSSDGQSNK 198

Query: 614  VTFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXX 435
            VTF+LTPEMIHQIFAEKPAVRQAYLNFVPNKMTE+DFWTKYWRAQYLHS RNIV      
Sbjct: 199  VTFNLTPEMIHQIFAEKPAVRQAYLNFVPNKMTEKDFWTKYWRAQYLHSTRNIVAAAAEA 258

Query: 434  XXXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEA 255
                  AVFL+QD ILASE + KIR+VDPTLDMEADEGDDYTHIPGHGLA E+ KDELEA
Sbjct: 259  AEDEELAVFLRQDAILASEIKHKIRKVDPTLDMEADEGDDYTHIPGHGLATESGKDELEA 318

Query: 254  QYEPFKRSFMQDINRHAAVVLEGRTIDVET-ADTRTVAEALASSKRVELAKEA-SNGN-V 84
            QYEPFKRSF+QDINRHAAVVLEGRT+D ET  DTR+VA+ALA+ KRVELAKEA S+GN V
Sbjct: 319  QYEPFKRSFLQDINRHAAVVLEGRTVDFETEGDTRSVAQALATCKRVELAKEASSDGNLV 378

Query: 83   QQERLDRISRMSEIEDLQAPREPPVAP 3
             QERLDRI+RM+EIEDLQAPR+PPVAP
Sbjct: 379  HQERLDRITRMAEIEDLQAPRDPPVAP 405


>gb|PLY74266.1| hypothetical protein LSAT_1X66020 [Lactuca sativa]
          Length = 602

 Score =  565 bits (1456), Expect = 0.0
 Identities = 300/387 (77%), Positives = 324/387 (83%), Gaps = 8/387 (2%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGGYF 960
            PGV G LKMTRERF F PNDPS S  LNV+FRLI            PALLN+T+DQG Y 
Sbjct: 18   PGVRGTLKMTRERFVFMPNDPSSSIRLNVEFRLIKGNKEGSNR---PALLNLTQDQGNYI 74

Query: 959  FEFENFPDRELCRDFVAKAIIANTSGASEKATP--PNNEQLSSAEMQRRIKLLQEDSELQ 786
            FEFENF DRELCRDFVAKAI     G SEKA P    +EQLSSAEM+RRIKLLQEDSELQ
Sbjct: 75   FEFENFSDRELCRDFVAKAITFYGEGGSEKAVPLPHKDEQLSSAEMERRIKLLQEDSELQ 134

Query: 785  KLHQQFVMGGVLSETEFWATRKKLVDVN---ASRRVKQRVGLKSDMTFNVKPSSDGQSNK 615
            KLH+QFVMGGVLSETEFWATRKKL+DVN   +SR+ KQRVGLKSDM FNVKPSSDGQSNK
Sbjct: 135  KLHKQFVMGGVLSETEFWATRKKLLDVNNTSSSRKAKQRVGLKSDMIFNVKPSSDGQSNK 194

Query: 614  VTFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXX 435
            VTF+LTPEMIHQIFAEKPAVRQAYLNFVPNKMTE+DFWTKYWRAQYLHS RNIV      
Sbjct: 195  VTFNLTPEMIHQIFAEKPAVRQAYLNFVPNKMTEKDFWTKYWRAQYLHSTRNIVAAAAEA 254

Query: 434  XXXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEA 255
                  AVFL+QD ILASE + KIR+VDPTLDMEADEGDDYTHIPGHGLA E+ KDELEA
Sbjct: 255  AEDEELAVFLRQDAILASEIKHKIRKVDPTLDMEADEGDDYTHIPGHGLATESGKDELEA 314

Query: 254  QYEPFKRSFMQDINRHAAVVLEGRTIDVET-ADTRTVAEALASSKRVELAKEA-SNGN-V 84
            QYEPFKRSF+QDINRHAAVVLEGRT+D ET  DTR+VA+ALA+ KRVELAKEA S+GN V
Sbjct: 315  QYEPFKRSFLQDINRHAAVVLEGRTVDFETEGDTRSVAQALATCKRVELAKEASSDGNLV 374

Query: 83   QQERLDRISRMSEIEDLQAPREPPVAP 3
             QERLDRI+RM+EIEDLQAPR+PPVAP
Sbjct: 375  HQERLDRITRMAEIEDLQAPRDPPVAP 401


>ref|XP_023734834.1| probable RNA polymerase II transcription factor B subunit 1-3 isoform
            X1 [Lactuca sativa]
 ref|XP_023734835.1| probable RNA polymerase II transcription factor B subunit 1-3 isoform
            X1 [Lactuca sativa]
 gb|PLY73018.1| hypothetical protein LSAT_9X33460 [Lactuca sativa]
          Length = 604

 Score =  560 bits (1443), Expect = 0.0
 Identities = 295/387 (76%), Positives = 323/387 (83%), Gaps = 8/387 (2%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGGYF 960
            PGV G LKMTRERF F PNDPS S  LNV+FRLI           +PALLN+T+DQG Y 
Sbjct: 19   PGVRGTLKMTRERFVFMPNDPSSSIRLNVEFRLIKGHKSSKEGSNRPALLNLTQDQGNYI 78

Query: 959  FEFENFPDRELCRDFVAKAIIANTSGASEKATP--PNNEQLSSAEMQRRIKLLQEDSELQ 786
            FEFENF DRELCRDFVAKAI     G SEKA P    +EQLSSAEM+RRIKLLQEDSELQ
Sbjct: 79   FEFENFSDRELCRDFVAKAITFYGEGDSEKAVPLAHKDEQLSSAEMERRIKLLQEDSELQ 138

Query: 785  KLHQQFVMGGVLSETEFWATRKKLVDVN---ASRRVKQRVGLKSDMTFNVKPSSDGQSNK 615
            KLH+QFV+ GVLSETEFWATRKKL+DVN   +SR+ KQ+VGLKSDM FNVKPSSDGQSNK
Sbjct: 139  KLHKQFVIRGVLSETEFWATRKKLLDVNNTSSSRKAKQKVGLKSDMIFNVKPSSDGQSNK 198

Query: 614  VTFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXX 435
            VTF+LTPEMIHQIFAEKPAVRQAYLNFVPNKMTE+DFWTKYWRAQYLHS RNIV      
Sbjct: 199  VTFNLTPEMIHQIFAEKPAVRQAYLNFVPNKMTEKDFWTKYWRAQYLHSTRNIVAAAAEA 258

Query: 434  XXXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEA 255
                  AVFL+QD ILASE + KIR+VDPTLDMEADEGDDYTHIPGHGLA E+  DELEA
Sbjct: 259  AEDEELAVFLRQDAILASEIKHKIRKVDPTLDMEADEGDDYTHIPGHGLATESGNDELEA 318

Query: 254  QYEPFKRSFMQDINRHAAVVLEGRTIDVET-ADTRTVAEALASSKRVELAKEA-SNGN-V 84
            QYEPFKRSF+QDINRHAAVVLEGRT+D ET  DTR+VA+A+A+ KRVELAKEA S+GN V
Sbjct: 319  QYEPFKRSFLQDINRHAAVVLEGRTVDFETEGDTRSVAQAIATCKRVELAKEASSDGNLV 378

Query: 83   QQERLDRISRMSEIEDLQAPREPPVAP 3
             QERLDRI+RM+EIEDLQAPR+PPVAP
Sbjct: 379  HQERLDRITRMAEIEDLQAPRDPPVAP 405


>gb|KVH99257.1| BSD-like protein [Cynara cardunculus var. scolymus]
          Length = 580

 Score =  557 bits (1436), Expect = 0.0
 Identities = 289/382 (75%), Positives = 314/382 (82%), Gaps = 3/382 (0%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGGYF 960
            PGV GILKMTRERF F PNDPS    LN                            G Y 
Sbjct: 19   PGVRGILKMTRERFVFMPNDPSLPIRLN----------------------------GNYI 50

Query: 959  FEFENFPDRELCRDFVAKAIIANTS---GASEKATPPNNEQLSSAEMQRRIKLLQEDSEL 789
            FEFENF DRELCRDFVAKAI ++       SEKA P  +EQLSSAEM+RRIKLLQEDSEL
Sbjct: 51   FEFENFSDRELCRDFVAKAITSSGEVGGPTSEKAVPLKDEQLSSAEMERRIKLLQEDSEL 110

Query: 788  QKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNKVT 609
            QKLH+QFV+GGVLSETEFWATRKKL+DV+ASR+ KQRVGLKSDM FNVKPSSDGQSN+VT
Sbjct: 111  QKLHKQFVIGGVLSETEFWATRKKLLDVSASRKAKQRVGLKSDMIFNVKPSSDGQSNRVT 170

Query: 608  FSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXXXX 429
            F+LTPEMIHQIFAEKPAVRQAYLNFVPNKMTE+DFWTKYWRAQYLHS +NIV        
Sbjct: 171  FNLTPEMIHQIFAEKPAVRQAYLNFVPNKMTEKDFWTKYWRAQYLHSTKNIVAAAAEAAE 230

Query: 428  XXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEAQY 249
                AVFLKQD ILASETRQKIR+VDPTLDMEADEGDDYTHIPGHGLA E+TKDE+EAQY
Sbjct: 231  DEELAVFLKQDAILASETRQKIRKVDPTLDMEADEGDDYTHIPGHGLATESTKDEMEAQY 290

Query: 248  EPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQERL 69
            EP+KRSF+QDINRHAAVVLEGRT+DVET DTR+VAEALASSKR+ELAKEAS+GNV QERL
Sbjct: 291  EPYKRSFLQDINRHAAVVLEGRTVDVETGDTRSVAEALASSKRIELAKEASDGNVYQERL 350

Query: 68   DRISRMSEIEDLQAPREPPVAP 3
            DRI+RM+EIEDLQAPR+PPVAP
Sbjct: 351  DRITRMAEIEDLQAPRDPPVAP 372


>ref|XP_023734836.1| probable RNA polymerase II transcription factor B subunit 1-1 isoform
            X2 [Lactuca sativa]
          Length = 570

 Score =  535 bits (1378), Expect = 0.0
 Identities = 282/370 (76%), Positives = 310/370 (83%), Gaps = 8/370 (2%)
 Frame = -1

Query: 1088 PNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGGYFFEFENFPDRELCRDFVA 909
            PNDPS S  LNV+FRLI           +PALLN+T+DQG Y FEFENF DRELCRDFVA
Sbjct: 2    PNDPSSSIRLNVEFRLIKGHKSSKEGSNRPALLNLTQDQGNYIFEFENFSDRELCRDFVA 61

Query: 908  KAIIANTSGASEKATP--PNNEQLSSAEMQRRIKLLQEDSELQKLHQQFVMGGVLSETEF 735
            KAI     G SEKA P    +EQLSSAEM+RRIKLLQEDSELQKLH+QFV+ GVLSETEF
Sbjct: 62   KAITFYGEGDSEKAVPLAHKDEQLSSAEMERRIKLLQEDSELQKLHKQFVIRGVLSETEF 121

Query: 734  WATRKKLVDVN---ASRRVKQRVGLKSDMTFNVKPSSDGQSNKVTFSLTPEMIHQIFAEK 564
            WATRKKL+DVN   +SR+ KQ+VGLKSDM FNVKPSSDGQSNKVTF+LTPEMIHQIFAEK
Sbjct: 122  WATRKKLLDVNNTSSSRKAKQKVGLKSDMIFNVKPSSDGQSNKVTFNLTPEMIHQIFAEK 181

Query: 563  PAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXXXXXXXXAVFLKQDPILA 384
            PAVRQAYLNFVPNKMTE+DFWTKYWRAQYLHS RNIV            AVFL+QD ILA
Sbjct: 182  PAVRQAYLNFVPNKMTEKDFWTKYWRAQYLHSTRNIVAAAAEAAEDEELAVFLRQDAILA 241

Query: 383  SETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEAQYEPFKRSFMQDINRHA 204
            SE + KIR+VDPTLDMEADEGDDYTHIPGHGLA E+  DELEAQYEPFKRSF+QDINRHA
Sbjct: 242  SEIKHKIRKVDPTLDMEADEGDDYTHIPGHGLATESGNDELEAQYEPFKRSFLQDINRHA 301

Query: 203  AVVLEGRTIDVET-ADTRTVAEALASSKRVELAKEA-SNGN-VQQERLDRISRMSEIEDL 33
            AVVLEGRT+D ET  DTR+VA+A+A+ KRVELAKEA S+GN V QERLDRI+RM+EIEDL
Sbjct: 302  AVVLEGRTVDFETEGDTRSVAQAIATCKRVELAKEASSDGNLVHQERLDRITRMAEIEDL 361

Query: 32   QAPREPPVAP 3
            QAPR+PPVAP
Sbjct: 362  QAPRDPPVAP 371


>ref|XP_017252565.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 [Daucus carota subsp. sativus]
          Length = 601

 Score =  484 bits (1245), Expect = e-163
 Identities = 248/384 (64%), Positives = 294/384 (76%), Gaps = 5/384 (1%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQG-GY 963
            PG  G+L M RERF F P+DP     LNV+FR I           K ALLN+T+D+G  Y
Sbjct: 19   PGTPGVLTMKRERFVFMPSDPRSLMKLNVEFRFIIGHKFSKEAPNKKALLNLTQDKGESY 78

Query: 962  FFEFENFPDRELCRDFVAKAII----ANTSGASEKATPPNNEQLSSAEMQRRIKLLQEDS 795
             FEF++FPDR+ CRDFVA AI     A  + + + + PP++EQLS+AEM RRIKLLQ DS
Sbjct: 79   IFEFDSFPDRDACRDFVAMAIAPPANAGKASSDKPSVPPSSEQLSTAEMDRRIKLLQVDS 138

Query: 794  ELQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNK 615
            ELQKLH++FVMGGVL+E EFWATRKK +D   S + KQRVGLKSDM FNVKPSSDGQSN+
Sbjct: 139  ELQKLHKEFVMGGVLTEAEFWATRKKSLDEKISSKSKQRVGLKSDMIFNVKPSSDGQSNR 198

Query: 614  VTFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXX 435
            V +SLTPE+IHQIFAEKPAVR+AYLN VP KMTE DFW KYWRA+YLHS +NIV      
Sbjct: 199  VKYSLTPEIIHQIFAEKPAVRRAYLNLVPKKMTETDFWMKYWRAEYLHSTKNIVAAAAEA 258

Query: 434  XXXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEA 255
                  AVFLKQD ILASE R+KIRRVDPTLDMEADEGDDYTH+P HGL+ + +KD  ++
Sbjct: 259  AEDEELAVFLKQDDILASEARRKIRRVDPTLDMEADEGDDYTHLPDHGLSRDVSKDLTDS 318

Query: 254  QYEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQE 75
            QY+ +KRSF+QD+NRHAAVVLEGR++DVE  DTR+VAEAL   K VE A EASN +V+Q 
Sbjct: 319  QYDLYKRSFLQDLNRHAAVVLEGRSVDVELGDTRSVAEALTRLKEVESANEASNTHVEQG 378

Query: 74   RLDRISRMSEIEDLQAPREPPVAP 3
            R D ISRM+E+EDLQ PR+ PVAP
Sbjct: 379  RSDLISRMAELEDLQGPRDHPVAP 402


>emb|CDP20682.1| unnamed protein product [Coffea canephora]
          Length = 601

 Score =  474 bits (1220), Expect = e-160
 Identities = 244/384 (63%), Positives = 300/384 (78%), Gaps = 5/384 (1%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGG-Y 963
            PG  G+LK+T++RFTF PNDPS     NV+FR I           + ALLN+T+DQGG Y
Sbjct: 22   PGTPGVLKLTKDRFTFMPNDPSSPVKHNVEFRTIKGHKFTKDGTKQ-ALLNLTQDQGGNY 80

Query: 962  FFEFENFPDRELCRDFVAKAII----ANTSGASEKATPPNNEQLSSAEMQRRIKLLQEDS 795
             FEFENFPDR +C+DFVA AI     A  +   + A P  +EQLS+AEM+RRIKLLQEDS
Sbjct: 81   IFEFENFPDRNVCKDFVASAIALSGEAGRTVPEKPAVPIQDEQLSAAEMERRIKLLQEDS 140

Query: 794  ELQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNK 615
            +LQKLH+QFV+GG+LSE EFWATRKKL++ N SRR KQRV LK+DM ++ KP +DGQSN+
Sbjct: 141  DLQKLHKQFVIGGILSEAEFWATRKKLLEQNYSRRPKQRVALKNDM-WSTKPLADGQSNR 199

Query: 614  VTFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXX 435
            VTF+LTPE+I QIFAEKPAVRQAYLNFVPNKMTE++FWTKY RA+YLHS +N++      
Sbjct: 200  VTFNLTPEIILQIFAEKPAVRQAYLNFVPNKMTEKEFWTKYSRAEYLHSTKNVIAAAAEA 259

Query: 434  XXXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEA 255
                  AVFLKQD +L +E R+KIR+VDPTLDMEADEGDDY H+P HGL   + KD L++
Sbjct: 260  AEDEELAVFLKQDDMLVNEARKKIRQVDPTLDMEADEGDDYMHLPDHGLPRNDNKDVLDS 319

Query: 254  QYEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQE 75
            QYEP++RSF Q +N+HAAVVL+GR IDVE  DTR+VAEALA +K  ELAK+AS+  + +E
Sbjct: 320  QYEPYRRSFSQHLNQHAAVVLQGRVIDVELGDTRSVAEALARTKHAELAKDASDVYLDKE 379

Query: 74   RLDRISRMSEIEDLQAPREPPVAP 3
            RL+RISRM+EIEDLQAPR+P VAP
Sbjct: 380  RLERISRMTEIEDLQAPRDPAVAP 403


>gb|KZM94354.1| hypothetical protein DCAR_017597 [Daucus carota subsp. sativus]
          Length = 592

 Score =  473 bits (1217), Expect = e-159
 Identities = 248/401 (61%), Positives = 294/401 (73%), Gaps = 22/401 (5%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQG-GY 963
            PG  G+L M RERF F P+DP     LNV+FR I           K ALLN+T+D+G  Y
Sbjct: 19   PGTPGVLTMKRERFVFMPSDPRSLMKLNVEFRFIIGHKFSKEAPNKKALLNLTQDKGESY 78

Query: 962  FFEFENFPDRELCRDFVAKAII----ANTSGASEKATPPNNEQLSSAEMQRRIKLLQEDS 795
             FEF++FPDR+ CRDFVA AI     A  + + + + PP++EQLS+AEM RRIKLLQ DS
Sbjct: 79   IFEFDSFPDRDACRDFVAMAIAPPANAGKASSDKPSVPPSSEQLSTAEMDRRIKLLQVDS 138

Query: 794  ELQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNK 615
            ELQKLH++FVMGGVL+E EFWATRKK +D   S + KQRVGLKSDM FNVKPSSDGQSN+
Sbjct: 139  ELQKLHKEFVMGGVLTEAEFWATRKKSLDEKISSKSKQRVGLKSDMIFNVKPSSDGQSNR 198

Query: 614  VTFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXX 435
            V +SLTPE+IHQIFAEKPAVR+AYLN VP KMTE DFW KYWRA+YLHS +NIV      
Sbjct: 199  VKYSLTPEIIHQIFAEKPAVRRAYLNLVPKKMTETDFWMKYWRAEYLHSTKNIVAAAAEA 258

Query: 434  XXXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIP--------------- 300
                  AVFLKQD ILASE R+KIRRVDPTLDMEADEGDDYTH+P               
Sbjct: 259  AEDEELAVFLKQDDILASEARRKIRRVDPTLDMEADEGDDYTHLPLYIGKLSPRLLIAVY 318

Query: 299  --GHGLAVENTKDELEAQYEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASS 126
               HGL+ + +KD  ++QY+ +KRSF+QD+NRHAAVVLEGR++DVE  DTR+VAEAL   
Sbjct: 319  MQDHGLSRDVSKDLTDSQYDLYKRSFLQDLNRHAAVVLEGRSVDVELGDTRSVAEALTRL 378

Query: 125  KRVELAKEASNGNVQQERLDRISRMSEIEDLQAPREPPVAP 3
            K VE A EASN +V+Q R D ISRM+E+EDLQ PR+ PVAP
Sbjct: 379  KEVESANEASNTHVEQGRSDLISRMAELEDLQGPRDHPVAP 419


>ref|XP_022039574.1| probable RNA polymerase II transcription factor B subunit 1-1
           isoform X3 [Helianthus annuus]
          Length = 471

 Score =  467 bits (1202), Expect = e-159
 Identities = 232/276 (84%), Positives = 254/276 (92%)
 Frame = -1

Query: 830 MQRRIKLLQEDSELQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTF 651
           M+RRIKLLQEDSELQKLH+QFV+GGVLSETEFWATRKKL+DVNASR+ KQRVGLKS+M F
Sbjct: 1   MERRIKLLQEDSELQKLHKQFVIGGVLSETEFWATRKKLLDVNASRKAKQRVGLKSEMIF 60

Query: 650 NVKPSSDGQSNKVTFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLH 471
           NVKPSSDGQSN+VTF+LTPEMIHQIFAEKPAVRQAY+NFVPNKMTE+DFWTKYWRAQYLH
Sbjct: 61  NVKPSSDGQSNRVTFNLTPEMIHQIFAEKPAVRQAYINFVPNKMTEKDFWTKYWRAQYLH 120

Query: 470 SARNIVXXXXXXXXXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHG 291
           S +NIV            AVFL+QD ILASETRQKIR+VDPTLDMEADEGDDYTHIPGHG
Sbjct: 121 STKNIVAAAAEAAEDEELAVFLRQDAILASETRQKIRKVDPTLDMEADEGDDYTHIPGHG 180

Query: 290 LAVENTKDELEAQYEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVEL 111
           LA E+ KDELEAQYEP+KRSF+QDINRHAAVVLEGRTIDVET DTRTVAEALASSKRVEL
Sbjct: 181 LANEDIKDELEAQYEPYKRSFLQDINRHAAVVLEGRTIDVETGDTRTVAEALASSKRVEL 240

Query: 110 AKEASNGNVQQERLDRISRMSEIEDLQAPREPPVAP 3
           AKEAS+GN  Q+R+DR+ RM+EIEDLQAPR+PPVAP
Sbjct: 241 AKEASDGNSHQDRIDRMIRMAEIEDLQAPRDPPVAP 276


>gb|PHT35492.1| putative RNA polymerase II transcription factor B subunit 1-1
            [Capsicum baccatum]
          Length = 600

 Score =  468 bits (1203), Expect = e-157
 Identities = 240/382 (62%), Positives = 294/382 (76%), Gaps = 4/382 (1%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGG-Y 963
            PGV G+LKMTRERF F PNDP+ +  LNV+F+LI           K ALLN+T+DQGG Y
Sbjct: 20   PGVPGVLKMTRERFFFMPNDPTLTTKLNVEFKLIKGHKFSKEGSSKQALLNLTQDQGGNY 79

Query: 962  FFEFENFPDRELCRDFVAKAIIANTS---GASEKATPPNNEQLSSAEMQRRIKLLQEDSE 792
             FEF++FPDR+ CRDFVA AI A        SEK   P++EQLS+ EM RRIKLLQE+SE
Sbjct: 80   LFEFDSFPDRDQCRDFVASAIAACGEVGKATSEKPAVPHDEQLSATEMGRRIKLLQENSE 139

Query: 791  LQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNKV 612
            LQKLH+Q V+GG+LSE EFWA RKKL++   +++ KQRV LK+DM ++VKP SDGQ+N+V
Sbjct: 140  LQKLHRQLVIGGILSEAEFWAARKKLLEQTENKKPKQRVALKNDM-WSVKPLSDGQTNRV 198

Query: 611  TFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXXX 432
            TF+LTPE+IHQIFAEKPAVRQAYLNFVP KM+E++FWTKY RA+YLHS +NIV       
Sbjct: 199  TFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMSEKEFWTKYSRAEYLHSTKNIVAAFAEAS 258

Query: 431  XXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEAQ 252
                 AVFLKQD +LASE R+KIRRVDPTLDMEADEGDDY H+P HGL    TK+ LE Q
Sbjct: 259  EDEELAVFLKQDAMLASEARKKIRRVDPTLDMEADEGDDYMHLPDHGLPQVETKEILEPQ 318

Query: 251  YEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQER 72
            YEPFKRSF Q +N+HAAVVL GR IDVE  DTR+VAEA   + + ELA + S+ N  +ER
Sbjct: 319  YEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTKTNQAELANDVSDENAYRER 378

Query: 71   LDRISRMSEIEDLQAPREPPVA 6
            +++++R++EIEDLQ PR+PPVA
Sbjct: 379  INKVTRVAEIEDLQGPRDPPVA 400


>ref|XP_011097708.1| probable RNA polymerase II transcription factor B subunit 1-1 isoform
            X1 [Sesamum indicum]
          Length = 600

 Score =  467 bits (1201), Expect = e-157
 Identities = 238/384 (61%), Positives = 297/384 (77%), Gaps = 5/384 (1%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGG-Y 963
            PGV G+LKM+ ERF F PNDP  +  LNV+FR+I           K ALLN+T+DQGG Y
Sbjct: 19   PGVAGVLKMSIERFVFMPNDPKSTTKLNVEFRMIKGHKFTKEGSSKQALLNLTQDQGGNY 78

Query: 962  FFEFENFPDRELCRDFVAKAIIANTSGAS---EKATPP-NNEQLSSAEMQRRIKLLQEDS 795
             FEF++F DR++CR+FVA AI  +        +K+ PP NNEQLS  E +RRIKLLQE+S
Sbjct: 79   IFEFDSFADRDVCREFVANAIAFHAEAGRVVPDKSAPPVNNEQLSREETERRIKLLQENS 138

Query: 794  ELQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNK 615
            ELQ LH+QFV GG+L+E EFWATRKKL+D N SRR KQR+ LK++M + VKP SDGQ+N+
Sbjct: 139  ELQVLHKQFVYGGILTEAEFWATRKKLLDQNDSRRPKQRLALKNEM-WTVKPLSDGQTNR 197

Query: 614  VTFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXX 435
            VTF+LTPE+IHQIFAEKPAVRQAYLNFVPNKMTE++FWTKY RA+YLHS +N+V      
Sbjct: 198  VTFNLTPEIIHQIFAEKPAVRQAYLNFVPNKMTEKEFWTKYSRAEYLHSTKNVVAAAAEA 257

Query: 434  XXXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEA 255
                  AVFLK+D +LA+E R+KIRRVDPT+DMEADEGDDY H+P  GL  +  KD L++
Sbjct: 258  AEDEELAVFLKRDDMLANEARRKIRRVDPTVDMEADEGDDYIHLPDRGLLQDEAKDVLDS 317

Query: 254  QYEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQE 75
            QYEP++RSF QD+N+HAAVVL+GR +DVE  DTRTVAEAL  +K+ EL+ E SN N++++
Sbjct: 318  QYEPYRRSFSQDLNQHAAVVLQGRLVDVELGDTRTVAEALIRTKQAELSDEISNRNLERK 377

Query: 74   RLDRISRMSEIEDLQAPREPPVAP 3
              DRISR++EIEDLQ PR+P VAP
Sbjct: 378  LSDRISRITEIEDLQGPRDPAVAP 401


>ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 isoform X2 [Vitis vinifera]
          Length = 576

 Score =  465 bits (1197), Expect = e-157
 Identities = 237/384 (61%), Positives = 293/384 (76%), Gaps = 7/384 (1%)
 Frame = -1

Query: 1136 GVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQ---GG 966
            GV G+LKMT ++F F PNDP+ S   +V+FR I           KPALLN+T+D    GG
Sbjct: 19   GVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNKPALLNLTQDSEKGGG 78

Query: 965  YFFEFENFPDRELCRDFVAKAII----ANTSGASEKATPPNNEQLSSAEMQRRIKLLQED 798
            Y FEFEN+PDRE+CR+FV +A+     A+ +G+ + A    +EQLS+ EM+RRIKLL+ED
Sbjct: 79   YIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQLSTIEMERRIKLLRED 138

Query: 797  SELQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSN 618
            SELQKLH+QFV+ GVL+E EFWATRKKL+D N SR  KQRVG KS M  ++KP +DG++N
Sbjct: 139  SELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTDGRTN 198

Query: 617  KVTFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXX 438
            +VTF+LTPE+IHQIFAEKPAV QA+LNFVPNKMTE+DFW KY RA+YLH  RN V     
Sbjct: 199  RVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAAE 258

Query: 437  XXXXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELE 258
                   AVFLK D ILA+E R+KIRRVDPTLDMEAD+GDDY H+P HG+  + +K+ ++
Sbjct: 259  AAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIID 318

Query: 257  AQYEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQ 78
             QYE ++R+  QD+NRHAAVVLEGR IDVE  DTRTVAEALA SKRVE A E S+G+V +
Sbjct: 319  PQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTR 378

Query: 77   ERLDRISRMSEIEDLQAPREPPVA 6
            ERL+RISRM+EIEDLQAPR+ P A
Sbjct: 379  ERLERISRMTEIEDLQAPRDLPFA 402


>gb|PHU04081.1| putative RNA polymerase II transcription factor B subunit 1-1
            [Capsicum chinense]
          Length = 600

 Score =  466 bits (1199), Expect = e-157
 Identities = 240/382 (62%), Positives = 293/382 (76%), Gaps = 4/382 (1%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGG-Y 963
            PGV G+LKMTRERF F PNDP+ +  LNV+F+LI           K ALLN+T+DQGG Y
Sbjct: 20   PGVPGVLKMTRERFFFMPNDPTLTTKLNVEFKLIKGHKFSKEGSSKQALLNLTQDQGGNY 79

Query: 962  FFEFENFPDRELCRDFVAKAIIANTS---GASEKATPPNNEQLSSAEMQRRIKLLQEDSE 792
             FEF++FPDR+ CRDFVA AI A        SEK   P++EQLS+ EM RRIKLLQE+SE
Sbjct: 80   LFEFDSFPDRDQCRDFVASAIAACGEVGKATSEKPAVPHDEQLSATEMGRRIKLLQENSE 139

Query: 791  LQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNKV 612
            LQKLH+Q V+GG LSE EFWA RKKL++   +++ KQRV LK+DM ++VKP SDGQ+N+V
Sbjct: 140  LQKLHRQLVIGGTLSEAEFWAARKKLLEQTENKKPKQRVALKNDM-WSVKPLSDGQTNRV 198

Query: 611  TFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXXX 432
            TF+LTPE+IHQIFAEKPAVRQAYLNFVP KM+E++FWTKY RA+YLHS +NIV       
Sbjct: 199  TFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMSEKEFWTKYSRAEYLHSTKNIVAAFAEAS 258

Query: 431  XXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEAQ 252
                 AVFLKQD +LASE R+KIRRVDPTLDMEADEGDDY H+P HGL    TK+ LE Q
Sbjct: 259  EDEELAVFLKQDAMLASEARKKIRRVDPTLDMEADEGDDYMHLPDHGLPQVETKEILEPQ 318

Query: 251  YEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQER 72
            YEPFKRSF Q +N+HAAVVL GR IDVE  DTR+VAEA   + + ELA + S+ N  +ER
Sbjct: 319  YEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQAELANDVSDENAYRER 378

Query: 71   LDRISRMSEIEDLQAPREPPVA 6
            +++++R++EIEDLQ PR+PPVA
Sbjct: 379  INKVTRVAEIEDLQGPRDPPVA 400


>ref|XP_016545480.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 [Capsicum annuum]
 gb|PHT69546.1| putative RNA polymerase II transcription factor B subunit 1-1
            [Capsicum annuum]
          Length = 600

 Score =  466 bits (1199), Expect = e-157
 Identities = 240/382 (62%), Positives = 293/382 (76%), Gaps = 4/382 (1%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGG-Y 963
            PGV G+LKMTRERF F PNDP+ +  LNV+F+LI           K ALLN+T+DQGG Y
Sbjct: 20   PGVPGVLKMTRERFYFMPNDPTLTTKLNVEFKLIKGHKFSKEGSSKQALLNLTQDQGGNY 79

Query: 962  FFEFENFPDRELCRDFVAKAIIANTS---GASEKATPPNNEQLSSAEMQRRIKLLQEDSE 792
             FEF++FPDR+ CRDFVA AI A        SEK   P++EQLS+ EM RRIKLLQE+SE
Sbjct: 80   LFEFDSFPDRDQCRDFVASAIAACGEVGKATSEKPAVPHDEQLSATEMGRRIKLLQENSE 139

Query: 791  LQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNKV 612
            LQKLH+Q V+GG LSE EFWA RKKL++   +++ KQRV LK+DM ++VKP SDGQ+N+V
Sbjct: 140  LQKLHRQLVIGGTLSEAEFWAARKKLLEQTENKKPKQRVALKNDM-WSVKPLSDGQTNRV 198

Query: 611  TFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXXX 432
            TF+LTPE+IHQIFAEKPAVRQAYLNFVP KM+E++FWTKY RA+YLHS +NIV       
Sbjct: 199  TFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMSEKEFWTKYSRAEYLHSTKNIVAAFAEAS 258

Query: 431  XXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEAQ 252
                 AVFLKQD +LASE R+KIRRVDPTLDMEADEGDDY H+P HGL    TK+ LE Q
Sbjct: 259  EDEELAVFLKQDAMLASEARKKIRRVDPTLDMEADEGDDYMHLPDHGLPQVETKEILEPQ 318

Query: 251  YEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQER 72
            YEPFKRSF Q +N+HAAVVL GR IDVE  DTR+VAEA   + + ELA + S+ N  +ER
Sbjct: 319  YEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQAELANDVSDENAYRER 378

Query: 71   LDRISRMSEIEDLQAPREPPVA 6
            +++++R++EIEDLQ PR+PPVA
Sbjct: 379  INKVTRVAEIEDLQGPRDPPVA 400


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 isoform X1 [Vitis vinifera]
 emb|CBI39821.3| unnamed protein product, partial [Vitis vinifera]
          Length = 602

 Score =  465 bits (1197), Expect = e-156
 Identities = 237/384 (61%), Positives = 293/384 (76%), Gaps = 7/384 (1%)
 Frame = -1

Query: 1136 GVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQ---GG 966
            GV G+LKMT ++F F PNDP+ S   +V+FR I           KPALLN+T+D    GG
Sbjct: 19   GVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNKPALLNLTQDSEKGGG 78

Query: 965  YFFEFENFPDRELCRDFVAKAII----ANTSGASEKATPPNNEQLSSAEMQRRIKLLQED 798
            Y FEFEN+PDRE+CR+FV +A+     A+ +G+ + A    +EQLS+ EM+RRIKLL+ED
Sbjct: 79   YIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQLSTIEMERRIKLLRED 138

Query: 797  SELQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSN 618
            SELQKLH+QFV+ GVL+E EFWATRKKL+D N SR  KQRVG KS M  ++KP +DG++N
Sbjct: 139  SELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTDGRTN 198

Query: 617  KVTFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXX 438
            +VTF+LTPE+IHQIFAEKPAV QA+LNFVPNKMTE+DFW KY RA+YLH  RN V     
Sbjct: 199  RVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAAE 258

Query: 437  XXXXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELE 258
                   AVFLK D ILA+E R+KIRRVDPTLDMEAD+GDDY H+P HG+  + +K+ ++
Sbjct: 259  AAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIID 318

Query: 257  AQYEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQ 78
             QYE ++R+  QD+NRHAAVVLEGR IDVE  DTRTVAEALA SKRVE A E S+G+V +
Sbjct: 319  PQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTR 378

Query: 77   ERLDRISRMSEIEDLQAPREPPVA 6
            ERL+RISRM+EIEDLQAPR+ P A
Sbjct: 379  ERLERISRMTEIEDLQAPRDLPFA 402


>ref|XP_022873357.1| probable RNA polymerase II transcription factor B subunit 1-1 [Olea
            europaea var. sylvestris]
          Length = 600

 Score =  460 bits (1183), Expect = e-154
 Identities = 235/384 (61%), Positives = 295/384 (76%), Gaps = 5/384 (1%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQGG-Y 963
            PGV G LKMTRER  F PNDP+  + LNV+FR I           K ALLN+T+DQGG Y
Sbjct: 19   PGVPGSLKMTRERIVFMPNDPNSPRKLNVEFRTIKGHKFTKEGSSKQALLNLTQDQGGNY 78

Query: 962  FFEFENFPDRELCRDFVAKAII----ANTSGASEKATPPNNEQLSSAEMQRRIKLLQEDS 795
             FEF++F DR++CR+FVA AI        S + + A    +EQLS+AEM+ RIKLLQED+
Sbjct: 79   IFEFDSFADRDICREFVAAAIAFHGETGKSTSEKPAAALQDEQLSTAEMEHRIKLLQEDN 138

Query: 794  ELQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNK 615
            ELQ+LH+QFV+GG+L+E EFWATRKKL+D N  R+ KQRV LK++M ++VKP SDGQSN+
Sbjct: 139  ELQRLHKQFVIGGILTEAEFWATRKKLLDQNDRRKPKQRVALKNEM-WSVKPLSDGQSNR 197

Query: 614  VTFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXX 435
            VTF+LTPE+IHQIFAEKPAVRQAYL FVPNKM+E++FWTKY RA+YLHS +N+V      
Sbjct: 198  VTFNLTPEIIHQIFAEKPAVRQAYLKFVPNKMSEKEFWTKYSRAEYLHSTKNVVAAAAEA 257

Query: 434  XXXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEA 255
                  AVFLKQD +L +E R+KIRRVDPTLDMEAD GDDY H+P HGL  E +KD L++
Sbjct: 258  AEDEELAVFLKQDDMLTNEARRKIRRVDPTLDMEADVGDDYMHLPDHGLLREESKDVLDS 317

Query: 254  QYEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQE 75
            QYEP++R F QD+N+HAAVVL+GR +DVE  DTR+VAEALA +K+ ELA E S+GN++++
Sbjct: 318  QYEPYRRYFSQDLNQHAAVVLQGRVVDVELGDTRSVAEALARTKQAELANEVSDGNLEKD 377

Query: 74   RLDRISRMSEIEDLQAPREPPVAP 3
               RISR++EIEDLQ PR+  VAP
Sbjct: 378  LSHRISRVAEIEDLQGPRDLAVAP 401


>ref|XP_019251833.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 [Nicotiana attenuata]
          Length = 599

 Score =  457 bits (1176), Expect = e-153
 Identities = 236/382 (61%), Positives = 290/382 (75%), Gaps = 4/382 (1%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQG-GY 963
            PGV G+LK+T+ERF F PNDP+ +  LNV+F+LI           K ALLN+  DQG  Y
Sbjct: 19   PGVPGVLKLTKERFFFMPNDPTSTTKLNVEFKLIKGHRSSKEGSSKQALLNLMHDQGRSY 78

Query: 962  FFEFENFPDRELCRDFVAKAIIAN---TSGASEKATPPNNEQLSSAEMQRRIKLLQEDSE 792
             FEF++FPDR+ CR+FVA AI A       ASEK   P++EQLS+AEM RRIKLLQE+SE
Sbjct: 79   IFEFDSFPDRDKCREFVASAIAACGEVVKAASEKPAVPHDEQLSAAEMGRRIKLLQENSE 138

Query: 791  LQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNKV 612
            LQKLH+Q V+GG+LSE EFWA RKKL++    ++ KQRV LK+DM ++VKP SDGQ+N+V
Sbjct: 139  LQKLHRQLVIGGILSEAEFWAARKKLLEQGDIKKPKQRVALKNDM-WSVKPLSDGQTNRV 197

Query: 611  TFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXXX 432
            TF+LTPE+IHQIFAEKPAVRQAYL FVP KM+E++FWTKY RA+YLHS +NIV       
Sbjct: 198  TFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSRAEYLHSTKNIVAAAAEAA 257

Query: 431  XXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEAQ 252
                 AVFLKQD +LA E R+KIRRVDPTLDMEADEGDDY H+P HGL ++ TK+ LE Q
Sbjct: 258  EDEELAVFLKQDDMLAFEARKKIRRVDPTLDMEADEGDDYMHLPDHGLPLDETKEILEPQ 317

Query: 251  YEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQER 72
            YEPFKRSF Q +N+HAAVVL GR IDVE  DTR+VAEA   + + ELA E S+ +  +ER
Sbjct: 318  YEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTNQAELAAEVSDESAYRER 377

Query: 71   LDRISRMSEIEDLQAPREPPVA 6
            + ++SR++EIEDLQ P EPPVA
Sbjct: 378  IAKVSRVAEIEDLQGPHEPPVA 399


>ref|XP_009602018.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 isoform X1 [Nicotiana tomentosiformis]
          Length = 599

 Score =  457 bits (1176), Expect = e-153
 Identities = 236/382 (61%), Positives = 290/382 (75%), Gaps = 4/382 (1%)
 Frame = -1

Query: 1139 PGVDGILKMTRERFTFRPNDPSKSQPLNVDFRLIXXXXXXXXXXXKPALLNITKDQG-GY 963
            PGV G+LK+T+ERF F PNDP+ +  LNV+F+LI           K ALLN+  DQG  Y
Sbjct: 19   PGVSGVLKLTKERFFFMPNDPTSTTKLNVEFKLIKGHRSSKEGSSKQALLNLMHDQGRNY 78

Query: 962  FFEFENFPDRELCRDFVAKAIIAN---TSGASEKATPPNNEQLSSAEMQRRIKLLQEDSE 792
             FEF++FPDR+ CR+FVA AI A       ASEK   P++EQLS+AEM RRIKLLQE+SE
Sbjct: 79   IFEFDSFPDRDKCREFVASAIAACGEVVKAASEKPAVPHDEQLSAAEMGRRIKLLQENSE 138

Query: 791  LQKLHQQFVMGGVLSETEFWATRKKLVDVNASRRVKQRVGLKSDMTFNVKPSSDGQSNKV 612
            LQKLH+Q V+GG+LSE EFWA RKKL++    ++ KQRV LK+DM ++VKP SDGQ+N+V
Sbjct: 139  LQKLHRQLVIGGILSEAEFWAARKKLLEQGDIKKPKQRVALKNDM-WSVKPLSDGQTNRV 197

Query: 611  TFSLTPEMIHQIFAEKPAVRQAYLNFVPNKMTERDFWTKYWRAQYLHSARNIVXXXXXXX 432
            TF+LTPE+IHQIFAEKPAVRQAYL FVP KM+E++FWTKY RA+YLHS +NIV       
Sbjct: 198  TFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSRAEYLHSTKNIVAAAAEAA 257

Query: 431  XXXXXAVFLKQDPILASETRQKIRRVDPTLDMEADEGDDYTHIPGHGLAVENTKDELEAQ 252
                 AVFLKQD +LA E R+KIRRVDPTLDMEADEGDDY H+P HGL ++ TK+ LE Q
Sbjct: 258  EDEELAVFLKQDDMLAFEARKKIRRVDPTLDMEADEGDDYMHLPDHGLPLDETKEILEPQ 317

Query: 251  YEPFKRSFMQDINRHAAVVLEGRTIDVETADTRTVAEALASSKRVELAKEASNGNVQQER 72
            YEPFKRSF Q +N+HAAVVL GR IDVE  DTR+VAEA   + + ELA E S+ +  +ER
Sbjct: 318  YEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFIRTNQAELAAEVSDESAYRER 377

Query: 71   LDRISRMSEIEDLQAPREPPVA 6
            + ++SR++EIEDLQ P EPPVA
Sbjct: 378  IAKVSRVAEIEDLQGPHEPPVA 399