BLASTX nr result

ID: Chrysanthemum21_contig00017970 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00017970
         (391 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI09542.1| protein of unknown function DUF4005 [Cynara cardu...    58   3e-07

>gb|KVI09542.1| protein of unknown function DUF4005 [Cynara cardunculus var.
           scolymus]
          Length = 354

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -1

Query: 175 MCQG*WVDDTAMGRKGNWISSIKKALSPSSKEKKGQ 68
           M  G  VDDT MGRKGNW+SSIKKALSPSSKEK+ Q
Sbjct: 1   MFAGYSVDDTVMGRKGNWLSSIKKALSPSSKEKRSQ 36


Top