BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00017938
         (453 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI02292.1| hypothetical protein Ccrd_019415 [Cynara carduncu...    88   1e-19
ref|XP_022028583.1| probable DNA-directed RNA polymerase I subun...    77   1e-14
ref|XP_023744636.1| probable DNA-directed RNA polymerase I subun...    69   1e-11
ref|XP_023744637.1| probable DNA-directed RNA polymerase I subun...    68   4e-11

>gb|KVI02292.1| hypothetical protein Ccrd_019415 [Cynara cardunculus var. scolymus]
          Length = 114

 Score = 88.2 bits (217), Expect = 1e-19
 Identities = 52/86 (60%), Positives = 57/86 (66%)
 Frame = -1

Query: 453 KGDDSVKEVSKTNQSTAQGTSENEDDEKKSLDKVLAAKTKASEKNVATEDLNNQPXXXXX 274
           K D  VKEVSKTNQ  AQGTSEN+D+EK S D VL+AK +ASEK+ ATEDLN  P     
Sbjct: 32  KTDPDVKEVSKTNQYIAQGTSENDDNEKMSSDNVLSAKAQASEKS-ATEDLNKHPMDLDV 90

Query: 273 XXXXXXXXXGAPKVADWVKAAQRGFA 196
                       KVADWVKAAQRGFA
Sbjct: 91  GLDHDTNKV---KVADWVKAAQRGFA 113


>ref|XP_022028583.1| probable DNA-directed RNA polymerase I subunit RPA43 [Helianthus
           annuus]
 gb|OTG31545.1| hypothetical protein HannXRQ_Chr03g0076851 [Helianthus annuus]
          Length = 195

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 47/89 (52%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
 Frame = -1

Query: 453 KGDDSVKEVSKTNQSTAQGTSENEDDEKKSLDKVLAAKTKASEKNV-ATEDLNNQPXXXX 277
           KGD  VKE SK  +S  Q T E++D+EKKS D  LA K +AS+KNV A++DLNNQP    
Sbjct: 106 KGDVDVKEASKPKKSPDQDTLESDDNEKKSFDYSLAEKPQASQKNVEASKDLNNQPMDSD 165

Query: 276 XXXXXXXXXXGA--PKVADWVKAAQRGFA 196
                          KVADWVKAAQRGFA
Sbjct: 166 AGGDDDEDLDLGGDNKVADWVKAAQRGFA 194


>ref|XP_023744636.1| probable DNA-directed RNA polymerase I subunit RPA43 isoform X1
           [Lactuca sativa]
 gb|PLY65530.1| hypothetical protein LSAT_9X91980 [Lactuca sativa]
          Length = 190

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 41/84 (48%), Positives = 55/84 (65%)
 Frame = -1

Query: 447 DDSVKEVSKTNQSTAQGTSENEDDEKKSLDKVLAAKTKASEKNVATEDLNNQPXXXXXXX 268
           D+ VKE SKT+Q  AQ TSE +++ +++ D VL+AK++ S+   +TEDLN+QP       
Sbjct: 108 DNDVKEESKTHQPIAQETSETDNENERNFDDVLSAKSQ-SQNEPSTEDLNHQP-MEMEEH 165

Query: 267 XXXXXXXGAPKVADWVKAAQRGFA 196
                  G  KVADWVKAAQRGFA
Sbjct: 166 DEDHDLGGENKVADWVKAAQRGFA 189


>ref|XP_023744637.1| probable DNA-directed RNA polymerase I subunit RPA43 isoform X2
           [Lactuca sativa]
          Length = 188

 Score = 67.8 bits (164), Expect = 4e-11
 Identities = 41/84 (48%), Positives = 53/84 (63%)
 Frame = -1

Query: 447 DDSVKEVSKTNQSTAQGTSENEDDEKKSLDKVLAAKTKASEKNVATEDLNNQPXXXXXXX 268
           D+ VKE SKT+Q  AQ TSE +++ +++ D VL+AK   S+   +TEDLN+QP       
Sbjct: 108 DNDVKEESKTHQPIAQETSETDNENERNFDDVLSAK---SQNEPSTEDLNHQP-MEMEEH 163

Query: 267 XXXXXXXGAPKVADWVKAAQRGFA 196
                  G  KVADWVKAAQRGFA
Sbjct: 164 DEDHDLGGENKVADWVKAAQRGFA 187