BLASTX nr result

ID: Chrysanthemum21_contig00017669 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00017669
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10014.1| Zinc finger, RING/FYVE/PHD-type [Cynara carduncul...    61   5e-08
ref|XP_021974055.1| U-box domain-containing protein 62-like isof...    60   1e-07
ref|XP_021974054.1| U-box domain-containing protein 62-like isof...    60   1e-07
ref|XP_023736106.1| U-box domain-containing protein 62-like [Lac...    59   5e-07

>gb|KVI10014.1| Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus var. scolymus]
          Length = 439

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -1

Query: 166 ITVADPTGEMYYSQYLQGVEGSGAGFKEMMVDNG 65
           ITVADP GE+YYSQYL+G EGSGAG K+M+V+NG
Sbjct: 206 ITVADPNGELYYSQYLRGAEGSGAGLKDMLVENG 239


>ref|XP_021974055.1| U-box domain-containing protein 62-like isoform X2 [Helianthus
           annuus]
 gb|OTG21433.1| putative zinc finger, RING/FYVE/PHD-type [Helianthus annuus]
          Length = 420

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 166 ITVADPTGEMYYSQYLQGVEGSGAGFKEMMVDNG 65
           ITVADP GE+YYSQ   GVEGSGAGFK+M+V+NG
Sbjct: 187 ITVADPNGELYYSQLFNGVEGSGAGFKDMLVENG 220


>ref|XP_021974054.1| U-box domain-containing protein 62-like isoform X1 [Helianthus
           annuus]
          Length = 451

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 166 ITVADPTGEMYYSQYLQGVEGSGAGFKEMMVDNG 65
           ITVADP GE+YYSQ   GVEGSGAGFK+M+V+NG
Sbjct: 187 ITVADPNGELYYSQLFNGVEGSGAGFKDMLVENG 220


>ref|XP_023736106.1| U-box domain-containing protein 62-like [Lactuca sativa]
 gb|PLY72039.1| hypothetical protein LSAT_2X126241 [Lactuca sativa]
          Length = 437

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/35 (74%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
 Frame = -1

Query: 166 ITVADPTGEMYYSQYLQGVEGS-GAGFKEMMVDNG 65
           IT+ADPTGE+YYSQYLQG+EGS GAG K+++V+NG
Sbjct: 197 ITIADPTGELYYSQYLQGMEGSGGAGIKDILVENG 231


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