BLASTX nr result

ID: Chrysanthemum21_contig00017580 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00017580
         (370 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI12285.1| hypothetical protein Ccrd_009287 [Cynara carduncu...    50   9e-06

>gb|KVI12285.1| hypothetical protein Ccrd_009287 [Cynara cardunculus var. scolymus]
          Length = 175

 Score = 49.7 bits (117), Expect(2) = 9e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 318 SVERNEMMEGVNKLQGVCRESVIEGGSATTDVDRFIRN 205
           S E  EMME V K++GVCR SV EGGSAT ++D FIR+
Sbjct: 124 SDESKEMMERVKKVKGVCRVSVSEGGSATREIDSFIRD 161



 Score = 27.3 bits (59), Expect(2) = 9e-06
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -1

Query: 370 LVKREEIVAVVRRFMDLE 317
           +V R EI AVVRRFMD E
Sbjct: 106 VVARAEIAAVVRRFMDRE 123


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