BLASTX nr result

ID: Chrysanthemum21_contig00017564 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00017564
         (560 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH89329.1| hypothetical protein Ccrd_008681 [Cynara carduncu...    66   3e-09
ref|XP_023756543.1| FRIGIDA-like protein 4b [Lactuca sativa] >gi...    60   2e-07

>gb|KVH89329.1| hypothetical protein Ccrd_008681 [Cynara cardunculus var. scolymus]
          Length = 476

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 55/166 (33%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
 Frame = -2

Query: 487 DNKLESQFTTADLQTRLSELDKIKXXXXXXXXXXXXTPLNKXXXXXXXXXXXXRPPXXXX 308
           D KLES FT+ +LQ R++EL+KIK             P +K            RPP    
Sbjct: 318 DFKLESHFTSDNLQKRVNELEKIKSDRKRSGPASTSKPSSKRHRSERSGGGSSRPPKSVR 377

Query: 307 XXXXXXXXXAES--AHQQSASTLSAPYS--------------SYGVDYRH---PSSQTSG 185
                      +   HQ SA+  SAPYS              +YGV Y       SQ+  
Sbjct: 378 LAMSARQRNHPAPPTHQSSAARFSAPYSYTNPSVYEGTPNSAAYGVGYGSYGVAPSQSPA 437

Query: 184 NHRLQYAYPSQDIDATATRGDGYGTYDY--ASVSLPASLVPTYPTT 53
            + +QYA P QD          YG+YDY  A+ +  A LVPTYP T
Sbjct: 438 RYGVQYANPGQD----------YGSYDYGAAAAAAAAPLVPTYPAT 473


>ref|XP_023756543.1| FRIGIDA-like protein 4b [Lactuca sativa]
 gb|PLY90849.1| hypothetical protein LSAT_6X69441 [Lactuca sativa]
          Length = 475

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/44 (63%), Positives = 36/44 (81%)
 Frame = -2

Query: 547 SLDDVSNEMSVIRTVIKCIEDNKLESQFTTADLQTRLSELDKIK 416
           S DD+ NEMSV+  +IKCIED+KLESQF+  DLQ R +EL+K+K
Sbjct: 338 SWDDILNEMSVVLKIIKCIEDHKLESQFSRDDLQNRYNELEKMK 381


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