BLASTX nr result

ID: Chrysanthemum21_contig00017493 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00017493
         (524 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH93275.1| Homeodomain-like protein [Cynara cardunculus var....   160   8e-43
ref|XP_023730017.1| transcription factor TFIIIB component B'' ho...   157   2e-41
gb|PLY97558.1| hypothetical protein LSAT_5X112881 [Lactuca sativa]    157   2e-41
ref|XP_023730010.1| transcription factor TFIIIB component B'' ho...   157   2e-41
ref|XP_021988019.1| transcription factor TFIIIB component B''-li...   107   1e-23
gb|OTG10560.1| putative homeodomain-like, SANT domain, Transcrip...   107   1e-23

>gb|KVH93275.1| Homeodomain-like protein [Cynara cardunculus var. scolymus]
          Length = 657

 Score =  160 bits (405), Expect = 8e-43
 Identities = 86/166 (51%), Positives = 111/166 (66%), Gaps = 13/166 (7%)
 Frame = -3

Query: 459 PATQFVEAPTIADNVLLGRTEEEQPGNDANRISANINDDLQYSFDKLQQENAESVHTLDS 280
           P  QFVE    A+N   GR  EEQPGND N+IS NINDD Q SF+K Q+ + ES  TL+S
Sbjct: 49  PLRQFVEDVAAANNEFTGRIVEEQPGNDVNQISGNINDDWQSSFEKSQEVHGESFLTLES 108

Query: 279 PDDFFPESTTTAVNLPPCLETRTIHVSNDDTIEEGPIEPGLTNNVDASTNFDSLAKIDPL 100
            +DF P+ST   VN PPC    T HVS D  +E+GPIEP L+ N+D+ TNF+S A++DPL
Sbjct: 109 LNDFPPQSTIVTVNSPPCSNAPTGHVSIDGNLEKGPIEPDLSYNIDSCTNFESPAQLDPL 168

Query: 99  TGEEAAIYNENG--EIGHIREPP-----------NILANSKTSAGP 1
           TGEEAAI+N+NG  +IG++  P            +IL++SKT +GP
Sbjct: 169 TGEEAAIFNDNGDFQIGNLSGPKDAESSQFWESLDILSHSKTCSGP 214


>ref|XP_023730017.1| transcription factor TFIIIB component B'' homolog isoform X2
           [Lactuca sativa]
 ref|XP_023730021.1| transcription factor TFIIIB component B'' homolog isoform X2
           [Lactuca sativa]
 ref|XP_023730025.1| transcription factor TFIIIB component B'' homolog isoform X2
           [Lactuca sativa]
          Length = 663

 Score =  157 bits (396), Expect = 2e-41
 Identities = 90/170 (52%), Positives = 111/170 (65%), Gaps = 15/170 (8%)
 Frame = -3

Query: 465 PTPATQFVEAPTIADNVLLGRTEEEQPGNDANRISANINDDLQYSFDKLQQENAESVHTL 286
           PTP TQ VEA   ADN ++ RTEEEQ   D N++S NIND+ Q SF+K  +ENAE   TL
Sbjct: 45  PTPPTQPVEAAATADNEIIARTEEEQQPFDVNQVSGNINDNWQSSFEKPHEENAEPFPTL 104

Query: 285 DSPDDFFPESTTTAVNLPPCLETRT-IHVSNDDTIEEGPIEPGLTNNVDASTNFDSLAKI 109
           +S +D  P+STT  VN PP  ET T IHVS D+ IE+GPIE GL+N VDA TN +SLA+I
Sbjct: 105 ESLNDLLPQSTTVTVNSPPVSETPTAIHVSMDENIEKGPIE-GLSNTVDACTNLESLAQI 163

Query: 108 DPLTGEEAAIYNEN--------------GEIGHIREPPNILANSKTSAGP 1
           DPLTGEEA+I+N+N               E     EP +IL+ S+  AGP
Sbjct: 164 DPLTGEEASIFNDNEDFQIESLSSVSKGAENALFWEPLDILSESRICAGP 213


>gb|PLY97558.1| hypothetical protein LSAT_5X112881 [Lactuca sativa]
          Length = 671

 Score =  157 bits (396), Expect = 2e-41
 Identities = 90/170 (52%), Positives = 111/170 (65%), Gaps = 15/170 (8%)
 Frame = -3

Query: 465 PTPATQFVEAPTIADNVLLGRTEEEQPGNDANRISANINDDLQYSFDKLQQENAESVHTL 286
           PTP TQ VEA   ADN ++ RTEEEQ   D N++S NIND+ Q SF+K  +ENAE   TL
Sbjct: 53  PTPPTQPVEAAATADNEIIARTEEEQQPFDVNQVSGNINDNWQSSFEKPHEENAEPFPTL 112

Query: 285 DSPDDFFPESTTTAVNLPPCLETRT-IHVSNDDTIEEGPIEPGLTNNVDASTNFDSLAKI 109
           +S +D  P+STT  VN PP  ET T IHVS D+ IE+GPIE GL+N VDA TN +SLA+I
Sbjct: 113 ESLNDLLPQSTTVTVNSPPVSETPTAIHVSMDENIEKGPIE-GLSNTVDACTNLESLAQI 171

Query: 108 DPLTGEEAAIYNEN--------------GEIGHIREPPNILANSKTSAGP 1
           DPLTGEEA+I+N+N               E     EP +IL+ S+  AGP
Sbjct: 172 DPLTGEEASIFNDNEDFQIESLSSVSKGAENALFWEPLDILSESRICAGP 221


>ref|XP_023730010.1| transcription factor TFIIIB component B'' homolog isoform X1
           [Lactuca sativa]
          Length = 682

 Score =  157 bits (396), Expect = 2e-41
 Identities = 90/170 (52%), Positives = 111/170 (65%), Gaps = 15/170 (8%)
 Frame = -3

Query: 465 PTPATQFVEAPTIADNVLLGRTEEEQPGNDANRISANINDDLQYSFDKLQQENAESVHTL 286
           PTP TQ VEA   ADN ++ RTEEEQ   D N++S NIND+ Q SF+K  +ENAE   TL
Sbjct: 64  PTPPTQPVEAAATADNEIIARTEEEQQPFDVNQVSGNINDNWQSSFEKPHEENAEPFPTL 123

Query: 285 DSPDDFFPESTTTAVNLPPCLETRT-IHVSNDDTIEEGPIEPGLTNNVDASTNFDSLAKI 109
           +S +D  P+STT  VN PP  ET T IHVS D+ IE+GPIE GL+N VDA TN +SLA+I
Sbjct: 124 ESLNDLLPQSTTVTVNSPPVSETPTAIHVSMDENIEKGPIE-GLSNTVDACTNLESLAQI 182

Query: 108 DPLTGEEAAIYNEN--------------GEIGHIREPPNILANSKTSAGP 1
           DPLTGEEA+I+N+N               E     EP +IL+ S+  AGP
Sbjct: 183 DPLTGEEASIFNDNEDFQIESLSSVSKGAENALFWEPLDILSESRICAGP 232


>ref|XP_021988019.1| transcription factor TFIIIB component B''-like [Helianthus annuus]
 ref|XP_021988020.1| transcription factor TFIIIB component B''-like [Helianthus annuus]
 ref|XP_021988022.1| transcription factor TFIIIB component B''-like [Helianthus annuus]
          Length = 584

 Score =  107 bits (266), Expect = 1e-23
 Identities = 64/142 (45%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
 Frame = -3

Query: 468 APTPATQFVEAPTIADNVLLGRTEEEQPGNDANRISANINDDLQYSFDKLQQENAESVHT 289
           AP P+TQ VE         +  +  EQ  +D N+I  NI D LQ SF+K  +ENAE+  T
Sbjct: 46  APPPSTQPVE---------VAASTAEQTRDDVNQIIGNIVDSLQSSFEKSPEENAEAGIT 96

Query: 288 LDSPDDFFPESTTTAVNLPPCLETRTIHVSNDDTIEEGPIEPGLTNNVDASTNFDSLAKI 109
           LDSP+DF PESTT  V       T  + VS D  +  GP EP L  N+D ST   S+  +
Sbjct: 97  LDSPNDFLPESTTATV-------TPALDVSVDGKLAAGPTEPELITNIDDSTTLKSIEAL 149

Query: 108 DPLTGEEAAIYNENG--EIGHI 49
           DPLTGE+ AIYN+N   +IG++
Sbjct: 150 DPLTGEKGAIYNDNDGFQIGNL 171


>gb|OTG10560.1| putative homeodomain-like, SANT domain, Transcription factor TFIIIB
           component B'' [Helianthus annuus]
          Length = 688

 Score =  107 bits (266), Expect = 1e-23
 Identities = 64/142 (45%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
 Frame = -3

Query: 468 APTPATQFVEAPTIADNVLLGRTEEEQPGNDANRISANINDDLQYSFDKLQQENAESVHT 289
           AP P+TQ VE         +  +  EQ  +D N+I  NI D LQ SF+K  +ENAE+  T
Sbjct: 150 APPPSTQPVE---------VAASTAEQTRDDVNQIIGNIVDSLQSSFEKSPEENAEAGIT 200

Query: 288 LDSPDDFFPESTTTAVNLPPCLETRTIHVSNDDTIEEGPIEPGLTNNVDASTNFDSLAKI 109
           LDSP+DF PESTT  V       T  + VS D  +  GP EP L  N+D ST   S+  +
Sbjct: 201 LDSPNDFLPESTTATV-------TPALDVSVDGKLAAGPTEPELITNIDDSTTLKSIEAL 253

Query: 108 DPLTGEEAAIYNENG--EIGHI 49
           DPLTGE+ AIYN+N   +IG++
Sbjct: 254 DPLTGEKGAIYNDNDGFQIGNL 275


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