BLASTX nr result
ID: Chrysanthemum21_contig00017375
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00017375
(3503 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OTG21088.1| putative ribonuclease H-like domain-containing pr... 645 0.0
gb|OTG16942.1| putative ribonuclease H-like domain-containing pr... 649 0.0
gb|OTG37431.1| putative ribonuclease H-like domain-containing pr... 649 0.0
gb|OTF92045.1| putative ribonuclease H-like domain-containing pr... 551 0.0
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 420 0.0
gb|OTG33444.1| putative ribonuclease H-like domain-containing pr... 661 0.0
gb|PRQ55089.1| putative RNA-directed DNA polymerase [Rosa chinen... 412 0.0
dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subt... 408 0.0
dbj|GAU47513.1| hypothetical protein TSUD_138850 [Trifolium subt... 391 0.0
gb|PNX93622.1| retrovirus-related Pol polyprotein from transposo... 416 0.0
ref|XP_017415202.1| PREDICTED: retrovirus-related Pol polyprotei... 415 0.0
ref|XP_017415203.1| PREDICTED: retrovirus-related Pol polyprotei... 415 0.0
gb|PNX93517.1| retrovirus-related Pol polyprotein from transposo... 397 0.0
gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposo... 378 0.0
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 418 0.0
gb|PNY12226.1| retrovirus-related Pol polyprotein from transposo... 387 0.0
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 389 0.0
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 375 0.0
gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposo... 390 0.0
ref|XP_024196177.1| uncharacterized protein LOC112199378 [Rosa c... 384 0.0
>gb|OTG21088.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1460
Score = 645 bits (1664), Expect(3) = 0.0
Identities = 343/776 (44%), Positives = 496/776 (63%), Gaps = 12/776 (1%)
Frame = +3
Query: 114 SAEQVQQLISLLNCSKNSNNVHTHMGG-----TYFCGNTSFKIYKTDKGWIIDSGANQHM 278
++EQ+ +L+SL+ ++M G F +SF ++ W++DSGANQHM
Sbjct: 324 TSEQITKLMSLIGEKSEGEQQKSNMAGESSYVNNFVSCSSFVNFEHGYRWVVDSGANQHM 383
Query: 279 VTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTVNLLSV 458
V + + N +D+ + L++ HPNGTS + K L+L + ++L DV +VP Y+VNLLSV
Sbjct: 384 VNTDKDMINCVDVSECGLKVGHPNGTSVNVIKIGELKLINNVVLKDVFFVPGYSVNLLSV 443
Query: 459 HKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSNNIISCHS 638
HKLA+DN + + F+E C +QDL+ +K L IG+Q LY++ G + + N++
Sbjct: 444 HKLAKDNNIAVLFNESNCMLQDLKSKKVLVIGNQENGLYYVGRHGNSVNLCYNSV---DK 500
Query: 639 NSLWHNRLGHLSDQVLKALKHKIDFKGDFNSSPCDIWHYSKQTREPLPLSDHKSTSVGEL 818
+++WH+RLGH SDQVL LK K++ K PC+I H SKQ R P PLSDHKS +G+L
Sbjct: 501 SNVWHSRLGHPSDQVLAVLKDKLEIK-TVEHDPCEICHKSKQVRVPFPLSDHKSKGIGDL 559
Query: 819 IHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFHNYLKNKFNKA 995
+HLD+WGPY+VTS EG+KYFLT+VDDY+R VW Y L+ K EV +N+ +F+ + +F
Sbjct: 560 VHLDLWGPYRVTSYEGYKYFLTVVDDYTRSVWCYLLRNKMEVFENLKDFYELILTQFKTK 619
Query: 996 VKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNVARSLLFQA 1172
VK+FRSD+ TEFVNN ++ + K GI+HQT+ +YT QQNG+ R + HLLN+AR+L+FQ
Sbjct: 620 VKVFRSDNGTEFVNNQMNFFMKQKGILHQTSCSYTPQQNGVVERKHRHLLNIARALMFQG 679
Query: 1173 GTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGCLCFATILIDK 1352
G PL W+ C+LTA YLINRLPS VL GK P+EL+FG E ++SHLRSFGCLCF+T+L +
Sbjct: 680 GLPLRFWSDCVLTAVYLINRLPSSVLGGKSPYELMFGFEPSLSHLRSFGCLCFSTVLNES 739
Query: 1353 HKFSSKSENAFLLGTLTQKKVINYLAC-KIKIFYTQGMSSFMKIFSFKNERKFKKLSQIL 1529
KF+ ++ L+G KK + + K+++++ + + +F FK++ + I
Sbjct: 740 DKFAYHADKCVLIGYSNVKKGYKLWSLDEKKVYFSRDVKFYEHVFPFKSKLLDIDMGNID 799
Query: 1530 HLKQITSTFFDSHYVRRSPNL--LPNDESDAH--NDQGSDDESPHVDGTKSSSDHTSIDS 1697
K + F Y S + PNDE A+ +D S+ + P + T ++ +
Sbjct: 800 VDKSLNHVNFFDRYEAFSTEIPQTPNDEEGANRSHDIVSEAQQP-IPSTSATPGPVDLGH 858
Query: 1698 KATHNVDGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSEGNDFNIPNVVNEPITQRRS 1877
+VD ++ +SG +D T++S++ I + SEG +I RRS
Sbjct: 859 NIESSVDSSD--REESGVAED----TAVSNDEI----NPSEGTGGSI----------RRS 898
Query: 1878 GRTSKLPTKLSDFVLDGKVKYGIDRVVNYSKLSKENYCLSINLNKYFEPNTFHEVCKYKE 2057
R + +P + D+VL+ V+Y I+RVVNY+ LS ++ LNK EP+T+ E +
Sbjct: 899 SRPTSVPKRYQDYVLNNSVRYDINRVVNYACLSGDSVSFISGLNKTIEPSTYREAVNDPK 958
Query: 2058 WIIAMNNEIKALNRNETWEITELTPGRKAIGSKWIYKIKYMSNGDIERYKARLVANGYNQ 2237
W+ AMN E++AL RN TWE+ EL RK IG KWI+K+KY +NG+IERYKARLVA GYNQ
Sbjct: 959 WVEAMNLEMEALLRNNTWEVVELPANRKPIGCKWIFKVKYKANGEIERYKARLVAKGYNQ 1018
Query: 2238 REGVDYDETFSLVVKIVTIRFLISLAVNNGWPLFQLDVKNAFLYGNLTEGVYMTLP 2405
REG+D+ ETFS VVK+VT+R ++SL V NGW L+QLDV NAFLYG++TE VYMTLP
Sbjct: 1019 REGLDFGETFSPVVKMVTVRCILSLVVQNGWSLYQLDVNNAFLYGSITENVYMTLP 1074
Score = 255 bits (651), Expect(3) = 0.0
Identities = 114/207 (55%), Positives = 155/207 (74%)
Frame = +1
Query: 2881 NITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGIL 3060
+IT YQKL+ KLIYL+ TRPDI Y V LS+++H PL +LKI LR+LRYLK PGKG+L
Sbjct: 1233 DITNYQKLIGKLIYLSLTRPDICYAVQFLSQYMHKPLVGHLKIALRLLRYLKSCPGKGLL 1292
Query: 3061 ISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRA 3240
KG+NL + Y+DSDW KC TR+SV+G+ +FLG++L+SWK KKQ+ SRSS +AEYRA
Sbjct: 1293 FKKGNNLEVSCYADSDWGKCLQTRKSVSGYCVFLGSNLVSWKSKKQSTVSRSSGEAEYRA 1352
Query: 3241 LASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRD 3420
+ S TCE+IW+ ++L++LN+ P+ +YCD+ AI I +NP FH+RTKHFE DL F+R+
Sbjct: 1353 MCSATCELIWIVNVLKELNVNCKVPLNLYCDSSAAISIGANPVFHERTKHFELDLFFLRE 1412
Query: 3421 KITEGIRKPLKIESAKNTTDILTKGLA 3501
KI G + +KI+S D+ TKGL+
Sbjct: 1413 KIASGFIRTVKIDSDSQLADVFTKGLS 1439
Score = 189 bits (479), Expect(3) = 0.0
Identities = 95/173 (54%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Frame = +2
Query: 2390 VYDT-PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKT 2566
VY T P GY++ D +VCKL KSLYGLK APRKWNEKL LI GF S+ D+SL+V
Sbjct: 1069 VYMTLPEGYYTKGDNKVCKLIKSLYGLKQAPRKWNEKLTDVLISVGFVQSQCDHSLYVMN 1128
Query: 2567 KNNHFIGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGIC 2746
K + F+ LLVYVDDIVVT +N++E+N++K L +FQIKDLG LKYFLG+EV+ ++ G+C
Sbjct: 1129 KGSVFVALLVYVDDIVVTGNNIDEINRIKGLLSNSFQIKDLGVLKYFLGLEVIYDKAGLC 1188
Query: 2747 LSQIKYCLELLTEYGLLACKPSQTPIESKLIISDKPIHKKDKPLKT*LDIKNY 2905
L+Q KYCL+LL E+G L CKP TPIE ++ +K +K++ +DI NY
Sbjct: 1189 LNQRKYCLDLLAEFGYLGCKPVNTPIEPSHVVHNKLSSEKEEV----VDITNY 1237
>gb|OTG16942.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1458
Score = 649 bits (1675), Expect(3) = 0.0
Identities = 356/775 (45%), Positives = 500/775 (64%), Gaps = 13/775 (1%)
Frame = +3
Query: 120 EQVQQLISLLNCSKNSNNVHTHMGGTYFCGN-----TSFKIYKTDKGWIIDSGANQHMVT 284
EQ+ +L+SL+ + + ++MGG C + +S + + W++DSGANQHM+
Sbjct: 328 EQIAKLMSLVGEKPDGDQEKSNMGGMSACMSGFLSCSSSVCFSHEYNWVVDSGANQHMIK 387
Query: 285 SKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTVNLLSVHK 464
S + N +D+ + L++ HPNGTS + K +L+L + +I+ DV YVP Y+VNLLSVHK
Sbjct: 388 SDKDMFNCIDVSECGLKVGHPNGTSVSVLKIGDLKLINNVIIKDVFYVPGYSVNLLSVHK 447
Query: 465 LARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSNNIISCHSNS 644
LA+DNK+ + F+E+ C +QDL+ +K L IG Q LYF+ G + N+ + +
Sbjct: 448 LAKDNKIAVLFNENNCMLQDLRSKKILVIGRQENGLYFVGRNGNFANLCFNSSVK---SD 504
Query: 645 LWHNRLGHLSDQVLKALKHKIDFKGDFNSSPCDIWHYSKQTREPLPLSDHKSTSVGELIH 824
LWH+RLGH SDQVL LK +D K +PC++ H SKQ R P PLSDHKS +G+LIH
Sbjct: 505 LWHSRLGHPSDQVLAVLKDSLDVK-IVEHNPCEVCHRSKQVRVPFPLSDHKSKELGDLIH 563
Query: 825 LDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFHNYLKNKFNKAVK 1001
LD+WGPYKV+S EG+KYFLT+VDD++R VW Y LK+K EV +N+ F+ + +F K VK
Sbjct: 564 LDLWGPYKVSSYEGYKYFLTVVDDFTRTVWCYMLKSKVEVFENLKYFYELVLTQFKKKVK 623
Query: 1002 IFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNVARSLLFQAGT 1178
+FRSD+ TEF+NN + T+ K GI+HQT+ +YT QQNG+ R + HLLN AR+L+FQ+G
Sbjct: 624 MFRSDNGTEFINNQMSTFCKQKGIVHQTSCSYTPQQNGVVERKHRHLLNTARTLMFQSGL 683
Query: 1179 PLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGCLCFATILIDKHK 1358
PL W+ C+LTA Y+INRLPS VL GK P+EL+FG ++S+ R+FGCLCF+T L + K
Sbjct: 684 PLRFWSDCVLTAVYIINRLPSSVLSGKSPYELMFGFRPSLSYFRNFGCLCFSTNLNEPDK 743
Query: 1359 FSSKSENAFLLGTLTQKKVINYLAC-KIKIFYTQGMSSFMKIFSFKNERKFKKLSQILHL 1535
F+ ++ L+G KK + + K+F+++ + + ++ FK+++ +++ L
Sbjct: 744 FAYHADKCVLIGYSNVKKGYKLWSIDEKKVFFSRDVKFYEHVYPFKSKQINGEVNIDNSL 803
Query: 1536 KQITSTFFDSHYVRRSP--NLLPNDE---SDAHNDQGSDDESPHVDGTKSSSDHTSIDSK 1700
I FFD + SP +L PNDE +D+H D SDD+ P T ++ +S
Sbjct: 804 NLIN--FFDKNETN-SPEFSLTPNDEEGTTDSH-DTVSDDQQPG-PSTSAAPGLSSSGHN 858
Query: 1701 ATHNVDGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSEGNDFNIPNVVNEPITQRRSG 1880
+V+G+ S +SG +D +V T D S +EGN + RRS
Sbjct: 859 LGSSVEGSSS--RESGRAEDTVVST--------DEISPAEGNLEGL----------RRSS 898
Query: 1881 RTSKLPTKLSDFVLDGKVKYGIDRVVNYSKLSKENYCLSINLNKYFEPNTFHEVCKYKEW 2060
R P K DFVL G VKY I++VVNY+ LS EN L+K EP+ ++E K +W
Sbjct: 899 RNVSFPKKFQDFVLSGNVKYDINKVVNYACLSAENVSFISKLSKSTEPSCYNEASKDSKW 958
Query: 2061 IIAMNNEIKALNRNETWEITELTPGRKAIGSKWIYKIKYMSNGDIERYKARLVANGYNQR 2240
+ AMN E++AL RN TWE+ +L GRK IG KW+YKIKY SNG+IERYKARLVA GYNQR
Sbjct: 959 VEAMNLEMEALMRNNTWELVDLPSGRKPIGCKWVYKIKYRSNGEIERYKARLVAKGYNQR 1018
Query: 2241 EGVDYDETFSLVVKIVTIRFLISLAVNNGWPLFQLDVKNAFLYGNLTEGVYMTLP 2405
EG+D+ ETFS VVK+VTIR ++SLAV W L+QLDV NAFLYG+++E VYMTLP
Sbjct: 1019 EGIDFGETFSPVVKMVTIRCVLSLAVQYNWSLYQLDVNNAFLYGSISEDVYMTLP 1073
Score = 255 bits (651), Expect(3) = 0.0
Identities = 115/207 (55%), Positives = 156/207 (75%)
Frame = +1
Query: 2881 NITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGIL 3060
+IT YQKL+ KLIYL+ TRPDISY V LS+F+H PL +LKI LR+LRYLK +PGKG++
Sbjct: 1232 DITNYQKLIGKLIYLSITRPDISYSVQYLSQFMHKPLTVHLKIALRLLRYLKLSPGKGLM 1291
Query: 3061 ISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRA 3240
K + +L Y+DSDWAKC TR+SVTGF IFLG +L+SWK KKQ+ SRS+ +AEYRA
Sbjct: 1292 FKKSGSFDLSCYADSDWAKCLDTRKSVTGFCIFLGQNLVSWKSKKQSTVSRSTGEAEYRA 1351
Query: 3241 LASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRD 3420
+ S TCE++W+ ++L +LN+K P+ ++CD+ A+ IA+NP FH+RTKHFE DL+F+R+
Sbjct: 1352 MCSATCELVWIVNVLNELNVKCSLPIQVFCDSSAAMSIAANPVFHERTKHFEIDLYFLRE 1411
Query: 3421 KITEGIRKPLKIESAKNTTDILTKGLA 3501
K++ G K+ES DI TKGL+
Sbjct: 1412 KVSNGFIVTTKVESEDQLADIFTKGLS 1438
Score = 184 bits (466), Expect(3) = 0.0
Identities = 96/173 (55%), Positives = 123/173 (71%), Gaps = 1/173 (0%)
Frame = +2
Query: 2390 VYDT-PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKT 2566
VY T P GY+S N+ +VCKL KSLYGLK APRKWNEKL L+ GF S D+SL+V +
Sbjct: 1068 VYMTLPEGYYSKNESKVCKLVKSLYGLKQAPRKWNEKLTDVLLGIGFVQSSCDHSLYVLS 1127
Query: 2567 KNNHFIGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGIC 2746
K + F+ LLVYVDDI+VT +N E+NKVK L NFQIKDLG LKYFLG+EV+ +++G+C
Sbjct: 1128 KPSVFVVLLVYVDDIIVTGNNDLEINKVKTLLSNNFQIKDLGILKYFLGLEVVYDKSGLC 1187
Query: 2747 LSQIKYCLELLTEYGLLACKPSQTPIESKLIISDKPIHKKDKPLKT*LDIKNY 2905
L+Q KYCLELL E+G L CKP TPIE +++ + + + +DI NY
Sbjct: 1188 LNQRKYCLELLAEFGYLGCKPVNTPIELSHVVNKRAESDRTEL----IDITNY 1236
>gb|OTG37431.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1459
Score = 649 bits (1674), Expect(3) = 0.0
Identities = 348/774 (44%), Positives = 487/774 (62%), Gaps = 10/774 (1%)
Frame = +3
Query: 114 SAEQVQQLISLLNCSKNSNNVHTHMGG-----TYFCGNTSFKIYKTDKGWIIDSGANQHM 278
++EQ+ +L+SL+ S+ +T +GG + F +S + WI+DSGA+QHM
Sbjct: 331 TSEQISKLLSLVGEKSGSSAQNTSVGGECFNVSNFVSCSSSVSFNNSFVWIVDSGASQHM 390
Query: 279 VTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTVNLLSV 458
+ S + N++D+ + + + HPNGT + K +L+L D ++L DV YVP+Y VNLLSV
Sbjct: 391 IKSDKYMINVVDVSEFNITVGHPNGTKVKVLKIGDLKLTDNVVLRDVFYVPDYCVNLLSV 450
Query: 459 HKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSNNIISCHS 638
+KLA+DN + + F E+ C +QD +K L GSQ LYF++ G + + N+ + +
Sbjct: 451 YKLAKDNHISVIFKENSCVLQDSSSRKVLMNGSQDSGLYFVENYGNSVNVCLNSSVKSFT 510
Query: 639 NSLWHNRLGHLSDQVLKALKHKIDFKGDFNSSPCDIWHYSKQTREPLPLSDHKSTSVGEL 818
WH RLGH SDQVL LK + + PCD+ H +KQ R P PLS+HKS VG+L
Sbjct: 511 ---WHTRLGHPSDQVLAVLKGSLKINSN-EHGPCDVCHRAKQVRVPFPLSEHKSKFVGDL 566
Query: 819 IHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFHNYLKNKFNKA 995
IHLD+WGPYKV+S +GFKYFLT+VDDYSR VW YFL K EV +N+ F+ + +F K
Sbjct: 567 IHLDLWGPYKVSSYDGFKYFLTVVDDYSRSVWCYFLTNKTEVFENLKNFYELVVTQFKKR 626
Query: 996 VKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNVARSLLFQA 1172
+K+FRSD+ TEFVNN + + K GI+HQT+ +YT QQNG+ R + HLLN AR+L+FQ
Sbjct: 627 IKVFRSDNGTEFVNNQMSMFCKSKGILHQTSCSYTPQQNGVVERKHRHLLNTARALMFQG 686
Query: 1173 GTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGCLCFATILIDK 1352
G PL W+ C+LTA YLINRLPS VL G+ PFE++FG ++SHLR+FGCLCF+T+L D
Sbjct: 687 GLPLRYWSDCVLTAVYLINRLPSSVLNGRSPFEMMFGFSPSLSHLRNFGCLCFSTVLTDS 746
Query: 1353 HKFSSKSENAFLLGTLTQKKVINYLACKIK-IFYTQGMSSFMKIFSFKNERKFKKLSQIL 1529
KF+ ++ LG KK L+ K IF+++ + + ++ FK + F I
Sbjct: 747 DKFAYHADKCVFLGYSNFKKGYKLLSLDTKKIFFSRDVKFYENVYPFKT-KSFDNQETIC 805
Query: 1530 HLKQITSTFFDSHYVRRSPNLLPNDESDAH--NDQGSDDESPHVDGTKSSSDHTSIDSKA 1703
FFD Y P++ P+DE + N+ SDD+ P + S+S + +
Sbjct: 806 EKNLNQLNFFDE-YASEIPDM-PDDEEGTNGANNPISDDQQPL---SPSTSAPVPMVDHS 860
Query: 1704 THNVDGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSEGNDFNIPNVVNEPITQRRSGR 1883
+ S +DSG +D L + D N+ SEG + R+S R
Sbjct: 861 QQGGQESSSRQDDSGRAEDTLGLNE--DTNL------SEGT-----------YSVRKSSR 901
Query: 1884 TSKLPTKLSDFVLDGKVKYGIDRVVNYSKLSKENYCLSINLNKYFEPNTFHEVCKYKEWI 2063
P KLSD++++GKVKYGI++ V+YS LS EN C LNK EP+++ E K WI
Sbjct: 902 NVVFPRKLSDYIVEGKVKYGIEKTVSYSNLSVENLCFVSGLNKMVEPSSYSEAIKDPRWI 961
Query: 2064 IAMNNEIKALNRNETWEITELTPGRKAIGSKWIYKIKYMSNGDIERYKARLVANGYNQRE 2243
AMN E++AL +NETW + +L GRK IG +WIYKIKY +NG++ER+KARLVA GY+QRE
Sbjct: 962 EAMNKEMEALYKNETWVLCDLPKGRKPIGCRWIYKIKYKANGEVERFKARLVAKGYSQRE 1021
Query: 2244 GVDYDETFSLVVKIVTIRFLISLAVNNGWPLFQLDVKNAFLYGNLTEGVYMTLP 2405
GVD+ ETFS VVK+VTIR ++SLAV + WP+FQLDV NAFLYG+++E VYM+LP
Sbjct: 1022 GVDFGETFSPVVKMVTIRCVLSLAVQHSWPIFQLDVNNAFLYGSISEDVYMSLP 1075
Score = 244 bits (624), Expect(3) = 0.0
Identities = 111/208 (53%), Positives = 157/208 (75%)
Frame = +1
Query: 2878 KNITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGI 3057
K++T +QKL+ KLIYL+ TRPDISY V LS+F+H+P +L I LR+L+YLK +PGKG+
Sbjct: 1233 KDVTSFQKLIGKLIYLSITRPDISYAVQFLSQFMHAPNSGHLDIALRLLKYLKLSPGKGV 1292
Query: 3058 LISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYR 3237
+ + + + Y DSDWAKC TR+SVTG+ IFLGN ++SWK KKQ+V +RS+A+AEYR
Sbjct: 1293 MFKRANVFCVKGYVDSDWAKCLVTRKSVTGYCIFLGNCVVSWKSKKQSVVARSTAEAEYR 1352
Query: 3238 ALASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIR 3417
A+ S TCE++W+ ++L++L++K PV ++CD++ AI IA NP FH+RTKHFE DLHF+R
Sbjct: 1353 AMCSATCEIMWILNILKELHVKCDLPVKLFCDSQSAISIALNPVFHERTKHFEIDLHFLR 1412
Query: 3418 DKITEGIRKPLKIESAKNTTDILTKGLA 3501
+KI GI P K+ + D+ TKGL+
Sbjct: 1413 EKIAGGIVIPEKVATDVQLADLFTKGLS 1440
Score = 176 bits (446), Expect(3) = 0.0
Identities = 93/156 (59%), Positives = 109/156 (69%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P GYFS N+ +VCKL KSLY LK APRKWNEKL Q LI GF S D+S+F +K F
Sbjct: 1075 PPGYFSENETKVCKLVKSLYRLKQAPRKWNEKLSQVLIDMGFVKSVCDHSMFTLSKGAVF 1134
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
I LLVYVDDI+VT ++ EV VK L NFQIKDLG LKYFLGIEVL ++ G+CL+Q K
Sbjct: 1135 IVLLVYVDDIIVTGNSESEVLNVKQVLSDNFQIKDLGLLKYFLGIEVLYSDEGLCLTQRK 1194
Query: 2762 YCLELLTEYGLLACKPSQTPIESKLIISDKPIHKKD 2869
YCLELL E+G L KP TPIE +++ K K D
Sbjct: 1195 YCLELLDEFGFLGVKPVNTPIEQSHVLAGKLDKKLD 1230
>gb|OTF92045.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1342
Score = 551 bits (1421), Expect(3) = 0.0
Identities = 301/636 (47%), Positives = 411/636 (64%), Gaps = 8/636 (1%)
Frame = +3
Query: 522 DLQHQKTLAIGSQRQSLYFLDFTGTNNF-IKSNNIISCHSNSLWHNRLGHLSDQVLKALK 698
D + + L G Q LYF++ G N+ + N++ +C+ LWH+RLGH +DQVL LK
Sbjct: 349 DSKSGRILVTGKQDNGLYFVNKNGNNSVNLCFNSVNNCN---LWHSRLGHPADQVLSILK 405
Query: 699 HKIDFKGDFNSSPCDIWHYSKQTREPLPLSDHKSTSVGELIHLDVWGPYKVTSREGFKYF 878
+I F + C++ H +KQTR P PLS+HK+ +VG++IHLDVWGPYKVTS++G+KYF
Sbjct: 406 DEIGVVDVFKHT-CEVCHRAKQTRMPFPLSEHKTKNVGDVIHLDVWGPYKVTSKDGYKYF 464
Query: 879 LTMVDDYSR-VWVYFLKTKNEVADNIIEFHNYLKNKFNKAVKIFRSDD-TEFVNNYLHTY 1052
LT+VDDYSR VW Y LK+K EV +NI F+ + +F K VKIFRSD+ TEFVNN + +
Sbjct: 465 LTVVDDYSRAVWCYLLKSKMEVFENIENFYQLVLTQFKKKVKIFRSDNGTEFVNNKMDVF 524
Query: 1053 FKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNVARSLLFQAGTPLNMWTQCILTATYLINR 1232
K GI+HQT+ AYT QQNG+A R + HLLN+ARSLLFQ+G PL+ W C+LTA Y+INR
Sbjct: 525 CKTKGILHQTSCAYTPQQNGVAERKHRHLLNLARSLLFQSGVPLSFWADCVLTAVYIINR 584
Query: 1233 LPSFVLKGKYPFELVFGNELNISHLRSFGCLCFATILIDKHKFSSKSENAFLLGTLTQKK 1412
LPS VL GK P+EL+FG + + +HLR FGCLCF+T+L D KF+ SE L+G KK
Sbjct: 585 LPSSVLLGKSPYELMFGFKPSYAHLRVFGCLCFSTVLNDLDKFAFNSEKCILIGYSNVKK 644
Query: 1413 VINYLACKIKI-FYTQGMSSFMKIFSFKNERKFKKLSQILH-LKQITSTFFDSHYVRRSP 1586
+ K FY++ + + +F +K+++ + + + Q+ FFDS
Sbjct: 645 GYKLWSLDNKREFYSRDVKFYETVFPYKSQQLTNQDKYVSESVNQLN--FFDSVETSTIN 702
Query: 1587 NLLPNDE---SDAHNDQGSDDESPHVDGTKSSSDHTSIDSKATHNVDGTESLNNDSGATQ 1757
++ PNDE +D+H GSD +S S+ T D++ + G ES ++ G +
Sbjct: 703 SINPNDEEGNNDSHEVAGSDQQS------FPSTSATPTDAEQPCSTSGVESSSSSEGFDR 756
Query: 1758 DDLVITSLSDNNIVDSNSTSEGNDFNIPNVVNEPITQRRSGRTSKLPTKLSDFVLDGKVK 1937
+ + + D N+ SEGN N+ RRS R LP + DFVL+ K K
Sbjct: 757 AE------NTGTLNDENNLSEGNRSNV----------RRSIRNPTLPKRFEDFVLNSKTK 800
Query: 1938 YGIDRVVNYSKLSKENYCLSINLNKYFEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEI 2117
Y +D+VV YS LS EN C + LNK EP + E K W+ AMN E++AL RN TW +
Sbjct: 801 YSLDKVVKYSSLSAENLCFTTVLNKTSEPTCYEEAAKDPRWVEAMNKEMEALFRNNTWTL 860
Query: 2118 TELTPGRKAIGSKWIYKIKYMSNGDIERYKARLVANGYNQREGVDYDETFSLVVKIVTIR 2297
T+L RKAIG KW+Y+IKY SNG+IER+KARLVA G+NQREG+D+ ETFS VVK+VTIR
Sbjct: 861 TDLPQNRKAIGCKWVYRIKYKSNGEIERFKARLVAKGFNQREGLDFGETFSPVVKMVTIR 920
Query: 2298 FLISLAVNNGWPLFQLDVKNAFLYGNLTEGVYMTLP 2405
+++LAV+ WPL+QLDV NAFL+G++TE VYM LP
Sbjct: 921 TVVTLAVHYKWPLYQLDVDNAFLHGSITEDVYMKLP 956
Score = 265 bits (678), Expect(3) = 0.0
Identities = 118/207 (57%), Positives = 161/207 (77%)
Frame = +1
Query: 2881 NITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGIL 3060
N+TG+QKL+ KLIYL+ TRPDISY V LS+F+HSP E +L + LR+LRYLK +PGKGI
Sbjct: 1115 NVTGFQKLIGKLIYLSLTRPDISYTVQFLSQFMHSPKEVHLSLALRLLRYLKLSPGKGIS 1174
Query: 3061 ISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRA 3240
K LNL+ Y+DSDWAKC +TR+SVTG+ +FLG SL+SWK KKQN+ SRS+A+AEYRA
Sbjct: 1175 FRKTDELNLFGYADSDWAKCLNTRKSVTGYCVFLGTSLVSWKSKKQNIVSRSTAEAEYRA 1234
Query: 3241 LASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRD 3420
+ S TCE++W+ +LL +L + P+ ++CD++ A+ IA+NP FH+RTKHFE DLHF+R+
Sbjct: 1235 MCSITCELMWIKNLLSELGVNCSIPMPLFCDSQAALSIAANPVFHERTKHFELDLHFLRE 1294
Query: 3421 KITEGIRKPLKIESAKNTTDILTKGLA 3501
K+ +GI K K++S D+ TKGL+
Sbjct: 1295 KVADGIIKTEKVDSENQLADVFTKGLS 1321
Score = 172 bits (436), Expect(3) = 0.0
Identities = 83/150 (55%), Positives = 108/150 (72%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P GY+S N+ +VCKL KSLYGLK APRKWNE+L L+K+GF SK D+SLF+ K
Sbjct: 956 PQGYYSKNETKVCKLIKSLYGLKQAPRKWNERLTDVLLKSGFIQSKCDHSLFIFNKKGVT 1015
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
+ LLVYVDD+V+T +++ E+ ++K L F+IKDLG LKYFLGIEVL + + + SQ K
Sbjct: 1016 VFLLVYVDDVVLTGNSVVEIERIKKILNDTFKIKDLGVLKYFLGIEVLYDNDEVFFSQRK 1075
Query: 2762 YCLELLTEYGLLACKPSQTPIESKLIISDK 2851
YCLELL E+G L CKP TPIE +++ K
Sbjct: 1076 YCLELLNEFGYLGCKPVNTPIEQSYLVTSK 1105
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 420 bits (1079), Expect(3) = 0.0
Identities = 279/802 (34%), Positives = 414/802 (51%), Gaps = 35/802 (4%)
Frame = +3
Query: 105 ACLSAEQVQQLISLLNCSKNSN-----NV--HTHMGGTYFCGNTSFKIYKTDKGWIIDSG 263
A S Q++ +L+ +K ++ NV + + G F + K D WI+DSG
Sbjct: 355 AATSHSDGHQMLEMLHATKQASANLVGNVPNYEELSGRVFALSRDIK----DTMWILDSG 410
Query: 264 ANQHMVTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTV 443
A+ H+V L + + + +++ P+GTSA++ + + +L++VL VP + +
Sbjct: 411 ASDHIVCDSSFLTSFQPVHNRIVKL--PDGTSAHVSHIGTVSFSAQFVLHNVLCVPLFYL 468
Query: 444 NLLSVHKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSNNI 623
NL+S+ KLA D+ F C+IQDLQ K + +G++ + LY L+ N+
Sbjct: 469 NLISISKLAFDSFYVTIFLRQVCFIQDLQSGKMIGMGTESEGLYCLNLPRKGTC----NV 524
Query: 624 ISCHSNSLWHNRLGHLSDQV---LKALKHKIDFKGDFNSSPCDIWHYSKQTREPLPLSDH 794
++ + LWH RLGH S +V L++K + S C I +K TR P PLS
Sbjct: 525 VNTKTQDLWHQRLGHPSSKVSVLFPFLQNKT-----LDVSTCSICPLAKHTRTPFPLSVS 579
Query: 795 KSTSVGELIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFHNY 971
S S +LIH+D+WG Y V S G +YFLT+VDD+SR WVY + K+E ++ F N
Sbjct: 580 SSDSCFDLIHVDIWGGYHVPSLSGAQYFLTIVDDHSRSTWVYLMHHKSEARSLLVHFVNL 639
Query: 972 LKNKFNKAVKIFRSDDTEFVNNYLHT-YFKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNV 1148
+ N+F VKI RSD+ + HT ++ GI+HQT+ T QQNG+ R + HLLNV
Sbjct: 640 VANQFGSQVKIVRSDNGP---EFKHTQFYSSRGILHQTSCINTPQQNGVVERKHRHLLNV 696
Query: 1149 ARSLLFQAGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGCLC 1328
AR+LLFQ+ P W ILTA YLINR P+ +L+GK PFE +F N SHLR FGC C
Sbjct: 697 ARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQGKTPFEKLFHKSPNYSHLRVFGCRC 756
Query: 1329 F-ATILIDKHKFSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMKIFSFKNERK 1505
F +T + KF +S + +G Y G + K++S K+++
Sbjct: 757 FVSTHPLRPSKFDPRSIESVFIG------------------YPHGQKGY-KVYSLKDKKX 797
Query: 1506 FKKLSQILHLKQITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDESPHVDGTKSSSDHT 1685
L TFF++ + + N L S ++P +D S +H+
Sbjct: 798 ---------LISRDVTFFETEFPYQ--NXLSTTSPSLDTFFPSLPQTPDIDDDHISFNHS 846
Query: 1686 --SIDSKATHNVDGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSEGNDFNIPNVVNEP 1859
++ AT +VD D+ S S +++ +S N P V+++P
Sbjct: 847 GSNLQPSATSSVDXHPQPTLDN----------SHSSSHVDPPSSPPSLN--TSPPVISQP 894
Query: 1860 ITQ--RRSGRTSKLPTKLSDFVLDGKVK------------------YGIDRVVNYSKLSK 1979
RRS R +K PT L DF ++ + + + +V++Y +LS
Sbjct: 895 SPSQPRRSSRPTKTPTTLQDFHIEAALPSRPVPPSSTSEVAHSGTIHSLSQVLSYDRLSP 954
Query: 1980 ENYCLSINLNKYFEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELTPGRKAIGSKW 2159
+ ++ + EP +F + W AMN EI+AL N+TW + L +K IG KW
Sbjct: 955 MHKAFTVKITLAKEPRSFSQAVLDSRWREAMNTEIQALQANKTWSLVPLPSHKKPIGCKW 1014
Query: 2160 IYKIKYMSNGDIERYKARLVANGYNQREGVDYDETFSLVVKIVTIRFLISLAVNNGWPLF 2339
+YKIKY +G IERYKARLVA G++Q EG+DY ETF+ V K+ T+R L+SLA GW L
Sbjct: 1015 VYKIKYNPDGTIERYKARLVAKGFSQVEGIDYRETFAPVAKLTTVRVLLSLASIQGWHLH 1074
Query: 2340 QLDVKNAFLYGNLTEGVYMTLP 2405
QLDV NAFL G+L E VYM LP
Sbjct: 1075 QLDVNNAFLNGDLYEDVYMQLP 1096
Score = 230 bits (586), Expect(3) = 0.0
Identities = 104/208 (50%), Positives = 146/208 (70%)
Frame = +1
Query: 2878 KNITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGI 3057
K+ + Y++L+ +LIYLT TRPD+ Y VH LS+F+ +P + +L ++LRY+KQ PG+GI
Sbjct: 1251 KDASQYRRLVGRLIYLTITRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGI 1310
Query: 3058 LISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYR 3237
+ L L +Y D+DWA+C+ TRRS TG+ IF GN+ ISWK KKQ SRSSA+AEYR
Sbjct: 1311 FLPSTGQLELTAYCDADWARCKDTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAEAEYR 1370
Query: 3238 ALASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIR 3417
++A+T CE+ WL SLL DLN+ V ++CDN+ AI IASNP FH+RTKH E D H +R
Sbjct: 1371 SMATTCCEITWLRSLLADLNVNHAHAVKLFCDNQAAIHIASNPVFHERTKHIEMDCHVVR 1430
Query: 3418 DKITEGIRKPLKIESAKNTTDILTKGLA 3501
+K+ G+ K + I + + D+ TK L+
Sbjct: 1431 EKVQRGLVKTMHIRTQEQPADLFTKPLS 1458
Score = 145 bits (366), Expect(3) = 0.0
Identities = 73/148 (49%), Positives = 98/148 (66%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G+ + RVCKL KSLYGLK A R+W KL L GFK S SDYSLF + F
Sbjct: 1096 PPGFGRKGEHRVCKLHKSLYGLKQASRQWFLKLSSALKAAGFKQSWSDYSLFXRNTQGRF 1155
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
LLVYVDD+++ ++LE++ + K FL ++F++KD+G L+YFLGIEV ++ GI L Q K
Sbjct: 1156 TTLLVYVDDVILAGNSLEDIIETKQFLASHFKLKDMGQLRYFLGIEVARSKQGIVLCQRK 1215
Query: 2762 YCLELLTEYGLLACKPSQTPIESKLIIS 2845
Y LELL + G L KPS+ P+E L ++
Sbjct: 1216 YALELLEDAGFLGAKPSRFPVEQSLTLT 1243
>gb|OTG33444.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 1427
Score = 661 bits (1706), Expect = 0.0
Identities = 354/807 (43%), Positives = 497/807 (61%), Gaps = 8/807 (0%)
Frame = +3
Query: 9 KWENQKATNTYSSNNASIEVXXXXXXXXXXXXACLSAEQVQQLISLLNCSKNSNNVHTHM 188
K + ++T +++SNN+ V L+ +QV +L+ LLN ++ + ++
Sbjct: 292 KSRSNQSTKSFASNNS---VSNKVESSSASTIPALTPDQVSRLLGLLNERTGESSQNANV 348
Query: 189 GGTYFCGNTSFKIYKTDKGWIIDSGANQHMVTSKDKLENIMDIFDLKLQIDHPNGTSAYI 368
G DSGANQHMV +++ + + +D+ + +++ HPNG+ A +
Sbjct: 349 G---------------------DSGANQHMVRTEEGIFDAIDVSEFNIKVKHPNGSDATV 387
Query: 369 QKAVNLRLRDKIILYDVLYVPEYTVNLLSVHKLARDNKLFIGFDEHKCYIQDLQHQKTLA 548
K +L DK+IL DV VPEY VNLLSV+KLA+DNKL + FDE+ CYIQD + TL
Sbjct: 388 TKIGKYKLNDKVILTDVFVVPEYYVNLLSVYKLAKDNKLRVLFDENNCYIQDSHTKNTLV 447
Query: 549 IGSQRQSLYFLDFTGTNNFIKSNNIISCHSNSLWHNRLGHLSDQVLKALKHKIDFKGDFN 728
G+Q LYF T + N S + +LWH+RLGH S+ VL LK ++ K N
Sbjct: 448 TGNQVDGLYFCGDTSKTMKVCFN---SHDTLNLWHSRLGHPSNPVLSVLKDSLNLKFTNN 504
Query: 729 SSPCDIWHYSKQTREPLPLSDHKSTSVGELIHLDVWGPYKVTSREGFKYFLTMVDDYSR- 905
PC++ H +KQ R P PLSDHK++S+GELIHLDVWGPY++ SREG+KYFL++VDDYSR
Sbjct: 505 DIPCEVCHRAKQHRVPFPLSDHKTSSLGELIHLDVWGPYRIQSREGYKYFLSVVDDYSRA 564
Query: 906 VWVYFLKTKNEVADNIIEFHNYLKNKFNKAVKIFRSDD-TEFVNNYLHTYFKLHGIIHQT 1082
VWVY ++ KNEV DNI F N +K +F K +K FRSD+ TEFVN+ +F +GIIHQT
Sbjct: 565 VWVYLMEHKNEVFDNIKSFFNMIKTQFGKTIKTFRSDNGTEFVNHQTKNFFNTNGIIHQT 624
Query: 1083 TIAYTHQQNGIA*RNNIHLLNVARSLLFQAGTPLNMWTQCILTATYLINRLPSFVLKGKY 1262
T YT QQNGI R + HLLNVARSLLFQ G PL W++CILTA YLINR PS +L GK
Sbjct: 625 TCPYTPQQNGIVERKHRHLLNVARSLLFQGGLPLRFWSECILTAVYLINRTPSSILNGKS 684
Query: 1263 PFELVFGNELNISHLRSFGCLCFATILIDKHKFSSKSENAFLLGTLTQKKVINYLAC-KI 1439
P++LV+G + ++HLR+FGCLCF+T+L + KF S +E LG QKK + K
Sbjct: 685 PYDLVYGFKPFLNHLRNFGCLCFSTVLNNPDKFGSHAEKCVFLGYSNQKKGYKLWSIDKK 744
Query: 1440 KIFYTQGMSSFMKIFSFKNERKFKKLSQILHLKQITS-TFFDSHYVRRSPNLLPNDE--- 1607
+I +++ + + +F FK+ + + +Q + + FFD V N+ PNDE
Sbjct: 745 QIIFSRDVRFYENVFPFKDNKNLCESNQNTSINNLNFFDFFDETIVYEDGNI-PNDEGGV 803
Query: 1608 -SDAHNDQGSDDESPHVDGTKSSSDHTSIDSKATHNVDGTESLNNDSGATQDDLVITSLS 1784
++ H+D +D+ P V T+ + + ++ G +
Sbjct: 804 QNEVHDDSTINDQQPQVT-TEPAGTAVEQQPSSERSIPGMADI----------------- 845
Query: 1785 DNNIVDSNSTSEGNDFNIPNVVNEPITQRRSGRTSKLPTKLSDFVLDGKVKYGIDRVVNY 1964
TS +D P +E RRS R + P KL DF+++GKVKYG+++V+NY
Sbjct: 846 ---------TSRNDDVIPPEGTSETPAIRRSTRNANFPKKLQDFIIEGKVKYGLEKVLNY 896
Query: 1965 SKLSKENYCLSINLNKYFEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELTPGRKA 2144
SKLS EN+C + LNK EP ++ E W+ AMN E++AL++N TW++ +L GRK
Sbjct: 897 SKLSPENFCFTSVLNKSLEPRSYKEAVSDPNWVRAMNEEMEALHKNNTWQLVDLPLGRKP 956
Query: 2145 IGSKWIYKIKYMSNGDIERYKARLVANGYNQREGVDYDETFSLVVKIVTIRFLISLAVNN 2324
IG KW++KIKY S G+IERYKARLVA GY+Q+EG+D++ETFS VVK+VT+R +ISLAV
Sbjct: 957 IGCKWVFKIKYKSTGEIERYKARLVAKGYSQKEGIDFEETFSPVVKMVTVRCIISLAVEK 1016
Query: 2325 GWPLFQLDVKNAFLYGNLTEGVYMTLP 2405
WPL+QLD+ NAFLYG+L E +YM+LP
Sbjct: 1017 NWPLYQLDINNAFLYGDLKEDIYMSLP 1043
Score = 276 bits (706), Expect(2) = e-120
Identities = 127/206 (61%), Positives = 163/206 (79%)
Frame = +1
Query: 2881 NITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGIL 3060
+ITGYQKL+ KLIYL+HTRPDISY V LS+F+H P +S+L+I LR+LRYLK++PGKGIL
Sbjct: 1202 DITGYQKLIGKLIYLSHTRPDISYSVQFLSQFMHKPSKSHLQIALRLLRYLKKSPGKGIL 1261
Query: 3061 ISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRA 3240
+KG++ +L +Y+DSDW KC TRRSVTGF IFLGNSL+SWK KKQN SRSSA+AEYRA
Sbjct: 1262 FTKGTSFDLTAYADSDWGKCVETRRSVTGFCIFLGNSLVSWKSKKQNTVSRSSAEAEYRA 1321
Query: 3241 LASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRD 3420
+ S TCE++WL ++L++LNI+I P++++CDN AI I +NP FHDRTKHFE DL F+R+
Sbjct: 1322 MCSATCEIMWLANILKELNIQIELPISLFCDNSAAISITANPVFHDRTKHFEIDLFFLRE 1381
Query: 3421 KITEGIRKPLKIESAKNTTDILTKGL 3498
KI G K + S D+ TKGL
Sbjct: 1382 KIASGFLKVISTVSKDQLADVFTKGL 1407
Score = 188 bits (477), Expect(2) = e-120
Identities = 101/201 (50%), Positives = 131/201 (65%), Gaps = 11/201 (5%)
Frame = +2
Query: 2336 VSTRCQKRLPLWQPN*GGVY-----------DTPWGYFSVNDQRVCKLKKSLYGLKHAPR 2482
+S +K PL+Q + + P GY+S ++ +VCKL KSLYGLK APR
Sbjct: 1010 ISLAVEKNWPLYQLDINNAFLYGDLKEDIYMSLPEGYYSKDESKVCKLVKSLYGLKQAPR 1069
Query: 2483 KWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHFIGLLVYVDDIVVTRSNLEEVNKVKDFL 2662
WNEKL + LI GFK SK D+SLF+K+ N+ F+ LLVYVDDIV+T +++ E++KVK L
Sbjct: 1070 MWNEKLVRVLIDFGFKQSKCDHSLFIKSTNSVFLVLLVYVDDIVLTGNDISEIDKVKKLL 1129
Query: 2663 ETNFQIKDLGNLKYFLGIEVLENENGICLSQIKYCLELLTEYGLLACKPSQTPIESKLII 2842
++ F IKDLG LKYFLGIEV+ + GICLSQ KYCL+LL E+GL CKP TPIE +
Sbjct: 1130 QSKFLIKDLGLLKYFLGIEVIRSSQGICLSQRKYCLDLLAEFGLTGCKPVNTPIEQNYSV 1189
Query: 2843 SDKPIHKKDKPLKT*LDIKNY 2905
+ D+PL LDI Y
Sbjct: 1190 VSS-CKQNDEPL---LDITGY 1206
>gb|PRQ55089.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1285
Score = 412 bits (1059), Expect(3) = 0.0
Identities = 278/751 (37%), Positives = 397/751 (52%), Gaps = 31/751 (4%)
Frame = +3
Query: 246 WIIDSGANQHMVTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLY 425
WI+DSGA+ H+V + L + + + +++ P+GT+A + + +L++VL+
Sbjct: 187 WILDSGASDHIVCNPSLLTSSKSVSNRWVKL--PDGTTARVTHVGTVVFSPHFVLHNVLF 244
Query: 426 VPEYTVNLLSVHKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFT--GTN 599
VP + +NL+SV KLA D+ F C IQDLQ K + G++++ LY L+ GT
Sbjct: 245 VPLFYLNLISVSKLAFDSFHITIFLRQICVIQDLQSGKMIGTGTEKEGLYRLNLPQKGTC 304
Query: 600 NFIKSNNIISCHSNSLWHNRLGHLSDQVLKALKHKIDFKGDFNSSPCDIWHYSKQTREPL 779
N + +N+ N+LWH RLGH S++ +L + K ++SS C I +K TR+P
Sbjct: 305 NAVHTNS----DPNNLWHQRLGHPSNKA-SSLFSFLANKACYSSS-CSICPLAKLTRQPF 358
Query: 780 PLSDHKSTSVGELIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNII 956
PLS +S S +LIH+D+WG Y V + G +YFLT+VDD+SR WVY +K K+E +I
Sbjct: 359 PLSTTRSASCFDLIHIDIWGGYHVPTFSGAQYFLTIVDDHSRSTWVYLMKHKSEARTLLI 418
Query: 957 EFHNYLKNKFNKAVKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNI 1133
F + N+F K V + RSD+ EF + ++ GIIHQT+ T QQNG+A R +
Sbjct: 419 HFIHLAANQFGKNVMVVRSDNGPEFK---IPQFYSSKGIIHQTSCVNTPQQNGVAERKHR 475
Query: 1134 HLLNVARSLLFQAGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRS 1313
HLLN+AR+LLFQA P W ILTA YLINR P+ +L+GK PFE +F E + SHLR
Sbjct: 476 HLLNMARALLFQANLPKPFWGDAILTAAYLINRTPTPILQGKTPFEKLFHKEPSYSHLRV 535
Query: 1314 FGCLCF-ATILIDKHKFSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMKIFSF 1490
FGC CF +T KF +S LG +K K+ T+ + F
Sbjct: 536 FGCQCFVSTHPTRPSKFDPRSMECVFLGYPHGQK-----GYKVYNLTTKKSLVSRDVIFF 590
Query: 1491 KNERKFKKLSQILHLKQITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDESPHVDGTKS 1670
+N F K S+ + ++ +L P+ AH D S + P
Sbjct: 591 ENAFPFPKNSE--------------SFPSQNTDLFPSIPRLAHYDNPSIPKIP------- 629
Query: 1671 SSDHTSIDSKATHNVDGTESLNNDSGATQD-DLVITSLSDNNIVDSNSTSEGNDF----N 1835
S TH+ S N S A Q + SLS + V S+ T D +
Sbjct: 630 -------PSSPTHHSPPMISPNPQSSAEQYLNSPSKSLSSTDPVSSDITLPNLDTISSDH 682
Query: 1836 IPNVV---NEPITQRRSGRTSKLPTKLSDFVLDGKVK------------------YGIDR 1952
IP++ P R+S R +KLPT L DF +D + + +
Sbjct: 683 IPSLSPPEQTPPRPRKSTRATKLPTALQDFHIDAALPTRLAPSSSSNEVTTPGTAHSLSH 742
Query: 1953 VVNYSKLSKENYCLSINLNKYFEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELTP 2132
V++Y+ LS + + N+ EP +F + K +W AM E++AL N+TW +
Sbjct: 743 VLSYANLSSPHRTFTANITLQREPTSFSQAVKDPKWREAMRLEVQALQDNKTWSLVPPPA 802
Query: 2133 GRKAIGSKWIYKIKYMSNGDIERYKARLVANGYNQREGVDYDETFSLVVKIVTIRFLISL 2312
++ IG KW+YKIKY +G IERYKARLVA GY+Q EG+DY ETF+ V K+ T+R L+SL
Sbjct: 803 HKRPIGCKWVYKIKYNPDGTIERYKARLVAKGYSQVEGLDYRETFAPVAKLTTVRVLLSL 862
Query: 2313 AVNNGWPLFQLDVKNAFLYGNLTEGVYMTLP 2405
A W L QLDV NAFL G+L E VYM LP
Sbjct: 863 AAQQNWHLHQLDVNNAFLNGDLHEDVYMHLP 893
Score = 224 bits (572), Expect(3) = 0.0
Identities = 104/203 (51%), Positives = 144/203 (70%)
Frame = +1
Query: 2893 YQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGILISKG 3072
Y++L+ +LIY T TRPD+ Y VH LS+F+ P + +L ++LRYLKQ PG+GI +
Sbjct: 1053 YRRLVGRLIYQTITRPDLVYAVHILSQFMDKPRQPHLDAAHKVLRYLKQTPGQGIFLPSK 1112
Query: 3073 SNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRALAST 3252
L L +Y D+DWA+C+ TRRS TG+ IFLG++ ISWK KKQ SRSSA+AEYR++A+T
Sbjct: 1113 GPLELSAYCDADWARCKDTRRSTTGYCIFLGHAPISWKTKKQRTVSRSSAEAEYRSMATT 1172
Query: 3253 TCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRDKITE 3432
CE+ WL +L+DLNI+ +PV ++CDNK AI IASNP FH+RTKH E D H +R+K+
Sbjct: 1173 CCEITWLQYILKDLNIQHLQPVKLFCDNKAAIHIASNPVFHERTKHIEIDCHVVREKVQR 1232
Query: 3433 GIRKPLKIESAKNTTDILTKGLA 3501
G+ + I + + DI TK L+
Sbjct: 1233 GLIQTEHIRTKEQPADIFTKPLS 1255
Score = 149 bits (375), Expect(3) = 0.0
Identities = 70/150 (46%), Positives = 104/150 (69%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G+ + +VCKL KSLYGL+ A ++W KL L GFK S SDYS+FV++ F
Sbjct: 893 PPGFERKGEHKVCKLHKSLYGLRQASKQWFLKLSSALKSAGFKQSWSDYSMFVRSHQGTF 952
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
LLVYVDD+++ +NL+++ + K FL ++F++KD+G LKYFLG+EV +++GI LSQ K
Sbjct: 953 TALLVYVDDVILAGNNLDDIIRTKSFLSSHFKLKDMGQLKYFLGLEVARSKHGIALSQRK 1012
Query: 2762 YCLELLTEYGLLACKPSQTPIESKLIISDK 2851
Y LE+L + G L KPS+ P+E +I++ +
Sbjct: 1013 YALEILEDTGFLGAKPSRFPLEQNIILTQE 1042
>dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subterraneum]
Length = 1512
Score = 408 bits (1049), Expect(3) = 0.0
Identities = 281/810 (34%), Positives = 425/810 (52%), Gaps = 45/810 (5%)
Frame = +3
Query: 123 QVQQLISLLNCSKNSNNV--HTHMGG---TYFC--GNTS--FKIYKTDKG-WIIDSGANQ 272
Q +QL++LL S ++++ T + G +Y GNT+ F G WIIDSGA+
Sbjct: 349 QYEQLVNLLQTSASTSSAGPSTSINGASTSYLAKAGNTNSVFSCNHFSYGAWIIDSGASD 408
Query: 273 HMVTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTVNLL 452
H+ +S L + DI + Q+ PNGT AY ++A +++L I+ +VL VPE+++NLL
Sbjct: 409 HICSSLSMLTDHHDINPI--QVKMPNGTIAYAKQAGSVQLGPNFIIDNVLLVPEFSLNLL 466
Query: 453 SVHKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSNNIISC 632
SV +L ++K + FD C IQ+ + K + G + LY+L T + +N+ IS
Sbjct: 467 SVPRLTHNSKFVVLFDNLDCLIQEKKSLKMIGSGELIEGLYYL--TNKPQPVSANSSISI 524
Query: 633 HSNS--------LWHNRLGHLSDQVLKALKHKIDFKGDFNSSPCDIWHYSKQTREPLPLS 788
+ +S LWH RLGHLS L ++ F + CDI H ++ + LS
Sbjct: 525 NPSSNIHIPKQALWHFRLGHLSHARLLLMQSSFPFVTIDEHAVCDICHLARHKKLTYKLS 584
Query: 789 DHKSTSVGELIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFH 965
+K++ GELIH D+WGP + S G +YFLT +DD+SR WV LK+K EV+ +I+F
Sbjct: 585 VNKASHCGELIHFDIWGPTSIHSIHGHRYFLTAIDDFSRFTWVILLKSKAEVSSLVIQFI 644
Query: 966 NYLKNKFNKAVKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLL 1142
++ +FN V+ R+D+ EF+ + ++ GI HQT+ T QQNG R + HLL
Sbjct: 645 TMIEKQFNTIVRTIRTDNGPEFL---IPEFYASKGINHQTSCVETPQQNGRVERKHQHLL 701
Query: 1143 NVARSLLFQAGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGC 1322
NV RSLLFQ+ P W+ + ATY+INR+ + +L+ K P+ L++ ++ L+ FG
Sbjct: 702 NVGRSLLFQSKLPKKFWSYAVSHATYIINRVCTPLLQNKSPYHLLYNKPPDLEQLKVFGS 761
Query: 1323 LCFATILIDKH-KFSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMKIFSFKNE 1499
LC+A+ L ++ K ++ LG Y GM + ++ N
Sbjct: 762 LCYASTLQNQRTKLDPRARKCIFLG------------------YKSGMKGVI-LYDIHNH 802
Query: 1500 RKF--KKLSQILHLKQITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDESPHVDGTKSS 1673
F + ++ H+ S+ + + SPN+ P N S PH S
Sbjct: 803 NIFVSRNITHYDHILPYASSSYSIPWSYHSPNIDPFITPPTSNSGSSS--IPH------S 854
Query: 1674 SDHTSIDSKATHNVDGTESLNNDSGATQDDLVITSLSDNNIVDSNST---------SEGN 1826
+DH ++ E+ + S T DL + ++DN+IV S + S
Sbjct: 855 TDHIHFNTPMCDQ----ENPSQPSSQTPSDLFVPQVTDNDIVSSQPSIPHQPHDTHSPLP 910
Query: 1827 DFNIPNVVNEPITQ-RRSGRTSKLPTKLSDFVLDGKVK----------YGIDRVVNYSKL 1973
N+P+ + I Q R+S R S P LSD+V + V Y I +YS +
Sbjct: 911 TTNLPSPSHNSIPQTRQSTRMSVKPKHLSDYVCNLSVDSSPPSSPGILYPISSFHSYSNI 970
Query: 1974 SKE--NYCLSINLNKYFEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELTPGRKAI 2147
S + NY LSI + EP + E + + W+ AMNNEI+AL N+TW K I
Sbjct: 971 SSKFRNYALSITAS--VEPRDYKEASQQQCWVDAMNNEIQALQHNKTWCYVTPPAHIKPI 1028
Query: 2148 GSKWIYKIKYMSNGDIERYKARLVANGYNQREGVDYDETFSLVVKIVTIRFLISLAVNNG 2327
G KW+YK+K+ ++G +ERYKARLVA GYNQ EG+D+ +TFS V KI T+R LI+LA
Sbjct: 1029 GCKWVYKVKHKADGSVERYKARLVAKGYNQVEGLDFFDTFSPVAKITTVRTLIALASIRS 1088
Query: 2328 WPLFQLDVKNAFLYGNLTEGVYMTLPGDIS 2417
W L Q+DV NAFL+G+L E VYM +P ++
Sbjct: 1089 WHLNQMDVNNAFLHGDLQEDVYMEVPQGVN 1118
Score = 225 bits (573), Expect(3) = 0.0
Identities = 103/215 (47%), Positives = 145/215 (67%)
Frame = +1
Query: 2854 HTQER*APKNITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYL 3033
H A ++ GY++L+ KL+YLT TRPDIS+ + LS+FL SP ++ R++RYL
Sbjct: 1261 HQDSSPAYDDVGGYRRLIGKLLYLTTTRPDISFAIQQLSQFLSSPTTTHFDTACRVVRYL 1320
Query: 3034 KQAPGKGILISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASR 3213
K +PG+G+ + S L L ++D+DWA C TRRS +G+ F+G+SLISW+ KKQN SR
Sbjct: 1321 KGSPGRGLFFPRQSPLQLLGFADADWANCADTRRSTSGYCFFIGSSLISWRAKKQNTVSR 1380
Query: 3214 SSAKAEYRALASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHF 3393
SS++AEYR+L+ +CE+ W+ LL+DL+I +P +YCDN+ AI IASNP FH+RTKH
Sbjct: 1381 SSSEAEYRSLSFASCELQWIVYLLKDLSIDCERPPVLYCDNQSAIHIASNPVFHERTKHL 1440
Query: 3394 EFDLHFIRDKITEGIRKPLKIESAKNTTDILTKGL 3498
E D H +RDK+ G+ K L I + D TK L
Sbjct: 1441 EIDCHLVRDKVQSGVFKLLPISTKAQLADFFTKAL 1475
Score = 145 bits (366), Expect(3) = 0.0
Identities = 72/147 (48%), Positives = 98/147 (66%)
Frame = +2
Query: 2396 DTPWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNN 2575
+ P G S +VCKL KSLYGLK A RKW EKL L+K G+ + SD+SLF +
Sbjct: 1112 EVPQGVNSPKPHQVCKLLKSLYGLKQASRKWYEKLTSLLLKEGYTQASSDHSLFTLKHGS 1171
Query: 2576 HFIGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQ 2755
F LLVYVDDI++ ++L+E ++K ++ F+IKDLG LKYFLGIEV ++ GI + Q
Sbjct: 1172 DFTALLVYVDDIILAGNSLQEFARIKLIMDNAFKIKDLGPLKYFLGIEVAHSKQGISICQ 1231
Query: 2756 IKYCLELLTEYGLLACKPSQTPIESKL 2836
KYCL+LL + GLL KP+ TP++ +
Sbjct: 1232 RKYCLDLLKDTGLLGSKPAPTPLDPSI 1258
>dbj|GAU47513.1| hypothetical protein TSUD_138850 [Trifolium subterraneum]
Length = 1469
Score = 391 bits (1005), Expect(3) = 0.0
Identities = 262/813 (32%), Positives = 409/813 (50%), Gaps = 42/813 (5%)
Frame = +3
Query: 111 LSAEQVQQLISLLNCS----KNSNNVHTHMGGTYFCGNTSF------KIYKTDK--GWII 254
++ +Q QLISLL S +S+ +G F G+TS KI+KT WI+
Sbjct: 309 ITQDQALQLISLLQSSFPSQASSSAASNQVGSVEFTGHTSVNQGMHSKIFKTCSLGNWIV 368
Query: 255 DSGANQHMVTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPE 434
DSGA+ HM +S + +I +K+++ PNG + + ++ D +++ +VL +P
Sbjct: 369 DSGASHHMCSSIQCFHSYSEIIPIKVRL--PNGNVVLAKHSGVVKFSDSLVITNVLCIPN 426
Query: 435 YTVNLLSVHKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTN---NF 605
++VNL+SV +L + + F + KC IQD ++ + + LY+L T +
Sbjct: 427 FSVNLISVSQLCKIQNYKVHFTDSKCTIQDQLTKRMIGFADLIEGLYYLTLTSKEVHAHS 486
Query: 606 IKSNNIISCHSNSLWHNRLGHLSDQVLKALKHKIDFKGDFNSSPCDIWHYSKQTREPLPL 785
I + +LWH RLGH S+ + L+ F N CDI H +K + +
Sbjct: 487 IDGTQHTNIPDQALWHFRLGHTSNTKMSLLQSVFPFITVDNKGVCDICHLAKHKKLYYKV 546
Query: 786 SDHKSTSVGELIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEF 962
S +K+T ELIH D+WGP S YFLT VDDYSR WV +K K+E ++I F
Sbjct: 547 SMNKATVPYELIHFDIWGPIASKSIHNHAYFLTAVDDYSRFTWVTLMKHKSEARQHVINF 606
Query: 963 HNYLKNKFNKAVKIFRS-DDTEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHL 1139
++ + N VKI R+ + EF+ + ++ GI+HQT+ T +QNG R + HL
Sbjct: 607 IKLIETQHNSKVKIVRTYNGVEFL---MPQFYASKGIVHQTSCVETPEQNGRVERKHQHL 663
Query: 1140 LNVARSLLFQAGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFG 1319
LNV R+LLFQA P W+ + ATY+INR+PS VL K P+EL+ +I L+ FG
Sbjct: 664 LNVGRALLFQAHLPKMFWSYAVQHATYIINRVPSVVLSNKSPYELLHNVLPDIKDLKVFG 723
Query: 1320 CLCFA-TILIDKHKFSSKSENAFLLGTLTQKK-VINYLACKIKIFYTQGMSSFMKIFSFK 1493
L +A T+ + K + ++ LG K I Y IF ++ ++ I +K
Sbjct: 724 SLAYASTLQSHRTKLTPRARKCIFLGYKQGVKGTILYDLHSKDIFISRNVTHHDHILPYK 783
Query: 1494 NERKFKKLSQILHLKQITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDESPH-----VD 1658
Q + + H N+ + ++DQ D +PH ++
Sbjct: 784 --------------PQSDHSLWHFHTSSEPTNVPETIHTSFNSDQPVDTSTPHEHVTVIE 829
Query: 1659 GTKSSSDHTSID-----SKATHNVD--GTESLNNDSGATQDDLVITSLSDNNIVDSNSTS 1817
T++ S+ + ++ +H D T+ N++ Q ++ L +N +D
Sbjct: 830 PTQNLSNDVQLVVPSDIAEPSHISDTCNTQCTNHNDALNQPAQPLSPLLISNHLDQTPAL 889
Query: 1818 EGNDFNIPNVVNEPITQRRSGRTSKLPTKLSDFVLDGKVK-----------YGIDRVVNY 1964
+ + P RS R P+ LSD+V + Y I +
Sbjct: 890 PTSSDSNPT--------HRSTRLKHAPSYLSDYVCNQSTTSPGTQSSSGSLYPISDYHSL 941
Query: 1965 SKLSKENYCLSINLNKYFEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELTPGRKA 2144
LS ++ +++L EP ++ E CK++ W AM++E++AL + TW I +L K
Sbjct: 942 KNLSSIHHAFTVSLTHNTEPKSYLEACKFECWQKAMDDELEALTKTGTWVIVDLPSHIKP 1001
Query: 2145 IGSKWIYKIKYMSNGDIERYKARLVANGYNQREGVDYDETFSLVVKIVTIRFLISLAVNN 2324
IGSKW+YK+KY ++G IERYKARLVA GYNQ EG+D+ +TFS V K+ T+R L+++A
Sbjct: 1002 IGSKWVYKVKYKADGTIERYKARLVAKGYNQVEGLDFFDTFSPVAKLTTVRLLLAIASIK 1061
Query: 2325 GWPLFQLDVKNAFLYGNLTEGVYMTLPGDISLL 2423
GW L QLDV NAFL+G L E VYM +P ++ L
Sbjct: 1062 GWFLHQLDVNNAFLHGELQEDVYMAIPEGVTTL 1094
Score = 229 bits (585), Expect(3) = 0.0
Identities = 105/208 (50%), Positives = 148/208 (71%)
Frame = +1
Query: 2878 KNITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGI 3057
+N++ Y++L+ KL+YL +TRPDIS+ LS+FLH P ++ R++RYLK PG+G+
Sbjct: 1243 ENVSLYRRLIGKLLYLCNTRPDISFATQQLSQFLHKPSVNHYHAACRVIRYLKHNPGRGL 1302
Query: 3058 LISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYR 3237
L + S++ L +SDSDWA C TR+S +G+ FLG+SLISWK KKQ SRSS++AEYR
Sbjct: 1303 LFPRKSDIQLLGFSDSDWAGCLDTRKSTSGYCFFLGSSLISWKAKKQTTISRSSSEAEYR 1362
Query: 3238 ALASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIR 3417
AL+S TCE+IWLT L+ DL ++ K +YCD++ A+ IASNP FH+RTKH E D H +R
Sbjct: 1363 ALSSATCELIWLTYLMNDLKVQCSKLPVIYCDSQSALHIASNPVFHERTKHLEIDCHLVR 1422
Query: 3418 DKITEGIRKPLKIESAKNTTDILTKGLA 3501
+K+ +GI + L I + + D LTK LA
Sbjct: 1423 EKVQQGILRLLPIPTEEQLADCLTKSLA 1450
Score = 157 bits (398), Expect(3) = 0.0
Identities = 78/151 (51%), Positives = 105/151 (69%), Gaps = 2/151 (1%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G ++ +VCKL+KSLYGLK A RKW EKL LI G+ S +DYSLF +HF
Sbjct: 1088 PEGVTTLKQNQVCKLQKSLYGLKQASRKWYEKLTSLLISEGYSQSTADYSLFTLHNASHF 1147
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
LL+YVDDI++ ++L E+ ++K L+T+F+IKDLG LKYFLG+EV ++ GI +SQ K
Sbjct: 1148 TALLIYVDDIILAGTDLNEITRIKKILDTHFKIKDLGVLKYFLGLEVAQSREGITISQRK 1207
Query: 2762 YCLELLTEYGLLACKPSQTPIES--KLIISD 2848
YCL+LL + GLL KP+ TP++ KL I D
Sbjct: 1208 YCLDLLKDSGLLGSKPASTPLDPAVKLHIDD 1238
>gb|PNX93622.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1454
Score = 416 bits (1069), Expect(3) = 0.0
Identities = 264/735 (35%), Positives = 400/735 (54%), Gaps = 15/735 (2%)
Frame = +3
Query: 246 WIIDSGANQHMVTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLY 425
WI+DSGA+ HM + + + + DI + + P+G +A K + L + + LY+VLY
Sbjct: 383 WILDSGASNHMTGTLEIMRELHDIQTCPIGL--PDGKNASATKEGVVLLDEGLKLYNVLY 440
Query: 426 VPEYTVNLLSVHKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNF 605
VP NL+S+ +L D + F + C +QD + + G +R LY+ T
Sbjct: 441 VPNLKCNLISLSQLMDDLDCIVHFSDKLCVMQDRTSRMLIGAGKRRDGLYYFR---TIQR 497
Query: 606 IKSNNIISCHSNSLWHNRLGHLSDQVLKALK--HKIDFKGDFNSSPCDIWHYSKQTREPL 779
+++ +++ + LWH RLGH S +V + + K + + N + CD+ +KQTRE
Sbjct: 498 VQACSVVGVNQLELWHRRLGHPSLKVTRLVSGTSKNNDHVELNKN-CDVCLRAKQTREKF 556
Query: 780 PLSDHKSTSVGELIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNII 956
LS+H + ELIH D+WGPY+ S G YF+T+VDDYSR VW+Y + K EV+ +I
Sbjct: 557 SLSEHVANDAFELIHCDLWGPYRTASSCGAFYFVTIVDDYSRAVWIYLIGDKREVSQTLI 616
Query: 957 EFHNYLKNKFNKAVKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNI 1133
F +K +F+K VKIFRSD+ TEFV + YF +GII QT+ T QQNG R +
Sbjct: 617 NFFTLIKRQFDKQVKIFRSDNGTEFV--CMKRYFHENGIIFQTSCVGTPQQNGRVERKHR 674
Query: 1134 HLLNVARSLLFQAGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRS 1313
H+LNVAR+L FQ+ P++ W +CIL A YL+NR PS +L GK P+E++ G ++ H+R
Sbjct: 675 HILNVARALRFQSNLPIDFWGECILAAGYLLNRTPSAILNGKTPYEMLHGQAPSLEHIRV 734
Query: 1314 FGCLCFATILIDK-HKFSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMK--IF 1484
FGCLC+A L K KF+SKS +G KK ++F + F+ +
Sbjct: 735 FGCLCYAHNLNRKGDKFASKSRKCIFIGYPYGKK-------GWRLFDLENREQFVSRDVE 787
Query: 1485 SFKNERKFKKLSQILHLKQITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDESPHVDGT 1664
F+ E F ++++ + +T +P+DE DA D+ D+ V T
Sbjct: 788 FFETEYPFASTAEVVSERILTH--------------VPHDE-DADLDEEELDKGVEVGET 832
Query: 1665 KSSSD-HTSIDSKATHNVDGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSE----GND 1829
S H ++D K + ++ +D L + +LS+N + T E G
Sbjct: 833 LCSDQGHPTLDEKGGNEIE-----------VEDQLNLEALSENVAELPSQTIETLGKGQR 881
Query: 1830 FNIPNVVNEPI---TQRRSGRTSKLPTKLSDFVLDGKVKYGIDRVVNYSKLSKENYCLSI 2000
P+ + T ++ +S+LP+ LS F + Y I VN K S +
Sbjct: 882 QKFPSTKLKGFVTHTAQKISPSSQLPS-LSSF---SGMPYPITHYVNLEKFSLAHRAFVA 937
Query: 2001 NLNKYFEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELTPGRKAIGSKWIYKIKYM 2180
L+ EP ++ E K W AM +EI+AL N TW +T L PG+K +G KW+YKIK+
Sbjct: 938 GLDHNKEPTSYVEAVKDHRWREAMQSEIQALENNGTWSVTHLPPGKKKLGCKWVYKIKHK 997
Query: 2181 SNGDIERYKARLVANGYNQREGVDYDETFSLVVKIVTIRFLISLAVNNGWPLFQLDVKNA 2360
S+G +ER+KARLV G +Q EG+DY+ETF+ V K+VT+R ++++A W L Q+DV NA
Sbjct: 998 SDGTVERFKARLVILGNHQIEGIDYNETFAPVAKMVTVRTVLAVAATKNWELHQMDVHNA 1057
Query: 2361 FLYGNLTEGVYMTLP 2405
FL+G+L E V+M P
Sbjct: 1058 FLHGDLQEEVFMKPP 1072
Score = 216 bits (550), Expect(3) = 0.0
Identities = 103/202 (50%), Positives = 140/202 (69%)
Frame = +1
Query: 2893 YQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGILISKG 3072
Y++L+ +LIYL TRP++SY VH LS+F+ P + + + LR++RYLK PG+GIL+
Sbjct: 1232 YRRLVGRLIYLCFTRPELSYCVHILSQFMQQPRQEHWEAALRVVRYLKGNPGQGILLRHD 1291
Query: 3073 SNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRALAST 3252
S+L LY +SDSDWA C TRRS+TG+ I LGNS ISWK KKQ+ SRSSA+AEYR++A+
Sbjct: 1292 SSLQLYGWSDSDWASCPLTRRSLTGWFILLGNSPISWKTKKQHTVSRSSAEAEYRSMATI 1351
Query: 3253 TCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRDKITE 3432
CE+ WL LL L I +P+ +YCD++ A+ IA NP FH+RTKH E D HFIRD+I +
Sbjct: 1352 CCELKWLKGLLSSLGISHTQPMQIYCDSQAALHIAKNPVFHERTKHIEVDCHFIRDEIVK 1411
Query: 3433 GIRKPLKIESAKNTTDILTKGL 3498
+ + + DI TK L
Sbjct: 1412 DHIRSTYVPTTAQLADIFTKAL 1433
Score = 136 bits (342), Expect(3) = 0.0
Identities = 68/142 (47%), Positives = 93/142 (65%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G+ + VC+L KSLYGLK APR W KL L GF+ S DYSLFV + + F
Sbjct: 1072 PPGFHTTQPGMVCRLHKSLYGLKQAPRCWFAKLSTALKTYGFEQSLYDYSLFVLQRQDCF 1131
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
+ +LVYVDD+++T ++ ++ K +L T F +KDLG LKYFLG+EV + GI L Q K
Sbjct: 1132 LAVLVYVDDLIITGNDHTAISAFKTYLHTCFHMKDLGTLKYFLGVEVARSPTGILLCQRK 1191
Query: 2762 YCLELLTEYGLLACKPSQTPIE 2827
Y L++++E GLL KP+ TP+E
Sbjct: 1192 YALDIISETGLLGSKPASTPLE 1213
>ref|XP_017415202.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Vigna angularis]
Length = 1472
Score = 415 bits (1067), Expect(3) = 0.0
Identities = 272/776 (35%), Positives = 421/776 (54%), Gaps = 9/776 (1%)
Frame = +3
Query: 105 ACLSAEQVQQLISLLNCSKNSNNVHTHMGGTYFCGNTSFKIY--KTDKGWIIDSGANQHM 278
A LS EQ + L ++LN K NT+ K+ K+ WI+DSGA+ HM
Sbjct: 362 AGLSNEQWEILATMLNSHK---------------ANTTEKMTGKKSRDLWIVDSGASNHM 406
Query: 279 VTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTVNLLSV 458
+ D L + + + PNG K ++ L + L +VLYVP+ NL+SV
Sbjct: 407 TGTLDNLWESRTLEGCPVGL--PNGELVLADKEGSVFLDGGLKLENVLYVPKLNCNLISV 464
Query: 459 HKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSNNIISCHS 638
+L + K + F + C +QD + + G ++ LY+ + G ++ +K+++I +
Sbjct: 465 SQLIDEAKCTVHFTDKFCAMQDHTLRMLIGAGERKDGLYW--YRGVSD-VKAHHINTESQ 521
Query: 639 NSLWHNRLGHLSDQVLKALKHKIDFKGDFNSSP-CDIWHYSKQTREPLPLSDHKSTSVGE 815
+WH R+GH + Q+++ + + +GD N+S C++ SKQ+R PLSD ++++V +
Sbjct: 522 LEIWHKRMGHPAYQIVEKIPNMTITRGDKNTSRVCEVCEKSKQSRNKFPLSDSQASNVFD 581
Query: 816 LIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFHNYLKNKFNK 992
LIH D+WGPY+ S G YFLT+VDD SR VW+Y L +K V+ ++ F ++ ++ K
Sbjct: 582 LIHCDLWGPYRTLSSCGASYFLTLVDDCSRAVWIYLLNSKKGVSQTLMNFITLIERQYKK 641
Query: 993 AVKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNVARSLLFQ 1169
VK+ RSD+ TEF+ L YF+LHGI+HQT+ T QQNG R + H+LNVAR+L FQ
Sbjct: 642 QVKMIRSDNGTEFM--CLQQYFQLHGILHQTSCTGTPQQNGRVERKHQHILNVARALRFQ 699
Query: 1170 AGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGCLCFATILID 1349
PL W +CILTA YLINR PS +L+GK P+E+V GN HLR FGCLC+A D
Sbjct: 700 GQLPLKFWGECILTAGYLINRTPSTILQGKTPYEIVNGNPPTYDHLRVFGCLCYAHNQ-D 758
Query: 1350 KH--KFSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMKIFSFKNERKFKKLSQ 1523
++ KF+S+S + +G +K + ++F+ F++ NE F L
Sbjct: 759 RNGDKFASRSRKSVFVGYSAGQKGWKLFDLEREVFWVSRDVKFVE-----NEFPFASL-- 811
Query: 1524 ILHLK--QITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDESPHVDGTKSSSDHTSIDS 1697
+H + ++ F ++ +++ DE+D + + +E +G + +S + S
Sbjct: 812 -IHKEPSEMKLPFINAGVENHDEHIVEIDENDPTTETVTTNE---FNGVQDNSHDLELAS 867
Query: 1698 KATHNVDGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSEGNDFNIPNVVNEPITQRRS 1877
+ + + T S ++ + V + L + V S + + V Q +S
Sbjct: 868 QVVPSPEQTSSSTIENEVDKMSTVSSPLGKGHRVRQPSVK------LRDYVTNTTIQVKS 921
Query: 1878 GRTSKLPTKLSDFVLDGKVKYGIDRVVNYSKLSKENYCLSINLNKYFEPNTFHEVCKYKE 2057
+ L+ + + Y + +N K S ++ L++ EP F E +
Sbjct: 922 -------SILTPHSVSSGMSYPLTNYLNCDKFSLQHRIFLAALHEEREPVHFSEAVRDVR 974
Query: 2058 WIIAMNNEIKALNRNETWEITELTPGRKAIGSKWIYKIKYMSNGDIERYKARLVANGYNQ 2237
W AM NEI AL N TW+I L G+K +G KWIYKIKY S+G IER+KARLV G +Q
Sbjct: 975 WRDAMTNEIDALQNNGTWDIIALPAGKKPLGCKWIYKIKYHSDGSIERFKARLVVLGNHQ 1034
Query: 2238 REGVDYDETFSLVVKIVTIRFLISLAVNNGWPLFQLDVKNAFLYGNLTEGVYMTLP 2405
EG+DYDETF+ V K+VTIR ++++AV W L Q+DV NAFL+G+L E VYM LP
Sbjct: 1035 VEGIDYDETFAPVAKMVTIRTILAVAVAKDWELHQMDVHNAFLHGDLDEAVYMKLP 1090
Score = 220 bits (560), Expect(3) = 0.0
Identities = 102/202 (50%), Positives = 140/202 (69%)
Frame = +1
Query: 2893 YQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGILISKG 3072
Y++L+ +LIYL TRP++SY VH LS+F+ P + + + LR++RYLK PG+G+L+ +
Sbjct: 1250 YRRLVGRLIYLCFTRPELSYSVHVLSQFMQQPRQEHWRAALRVVRYLKGQPGQGVLLKRE 1309
Query: 3073 SNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRALAST 3252
S+L LY + DSDWA C TRRS+TG+ +FLG S ISWK KKQ+ SRSSA AEYR++A+T
Sbjct: 1310 SDLRLYGWCDSDWATCPLTRRSITGWIVFLGQSPISWKTKKQHTVSRSSAGAEYRSMANT 1369
Query: 3253 TCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRDKITE 3432
TCE+ WL LL L I P+ +YCDN+ A+ IA NP FH+RTKH E D H IRD+I +
Sbjct: 1370 TCELKWLQGLLLSLGIPHSVPMNLYCDNQAALHIAKNPVFHERTKHIEVDCHLIRDEIQQ 1429
Query: 3433 GIRKPLKIESAKNTTDILTKGL 3498
+P + + D+ TK L
Sbjct: 1430 NRIQPTHVSTHSQLADLFTKPL 1451
Score = 130 bits (327), Expect(3) = 0.0
Identities = 67/142 (47%), Positives = 92/142 (64%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G+ + VC+L+KS+YGL+ APR W KL L + GF+ S+SD+SLF K
Sbjct: 1090 PPGFLVSQNGLVCRLRKSIYGLRQAPRCWFAKLSNALDQYGFQRSQSDHSLFTFRKKGIQ 1149
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
+ +LVYVDD+V+ ++ EE+ K K +L F +KDLG LKYFLG+EV + G+ L Q K
Sbjct: 1150 LVVLVYVDDLVIAGNHGEEIAKFKSYLHQCFHMKDLGKLKYFLGVEVARSSTGLFLCQRK 1209
Query: 2762 YCLELLTEYGLLACKPSQTPIE 2827
Y L+++ E GLL KP TPIE
Sbjct: 1210 YALDIIAETGLLGGKPVPTPIE 1231
>ref|XP_017415203.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Vigna angularis]
Length = 1435
Score = 415 bits (1067), Expect(3) = 0.0
Identities = 272/776 (35%), Positives = 421/776 (54%), Gaps = 9/776 (1%)
Frame = +3
Query: 105 ACLSAEQVQQLISLLNCSKNSNNVHTHMGGTYFCGNTSFKIY--KTDKGWIIDSGANQHM 278
A LS EQ + L ++LN K NT+ K+ K+ WI+DSGA+ HM
Sbjct: 325 AGLSNEQWEILATMLNSHK---------------ANTTEKMTGKKSRDLWIVDSGASNHM 369
Query: 279 VTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTVNLLSV 458
+ D L + + + PNG K ++ L + L +VLYVP+ NL+SV
Sbjct: 370 TGTLDNLWESRTLEGCPVGL--PNGELVLADKEGSVFLDGGLKLENVLYVPKLNCNLISV 427
Query: 459 HKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSNNIISCHS 638
+L + K + F + C +QD + + G ++ LY+ + G ++ +K+++I +
Sbjct: 428 SQLIDEAKCTVHFTDKFCAMQDHTLRMLIGAGERKDGLYW--YRGVSD-VKAHHINTESQ 484
Query: 639 NSLWHNRLGHLSDQVLKALKHKIDFKGDFNSSP-CDIWHYSKQTREPLPLSDHKSTSVGE 815
+WH R+GH + Q+++ + + +GD N+S C++ SKQ+R PLSD ++++V +
Sbjct: 485 LEIWHKRMGHPAYQIVEKIPNMTITRGDKNTSRVCEVCEKSKQSRNKFPLSDSQASNVFD 544
Query: 816 LIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFHNYLKNKFNK 992
LIH D+WGPY+ S G YFLT+VDD SR VW+Y L +K V+ ++ F ++ ++ K
Sbjct: 545 LIHCDLWGPYRTLSSCGASYFLTLVDDCSRAVWIYLLNSKKGVSQTLMNFITLIERQYKK 604
Query: 993 AVKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNVARSLLFQ 1169
VK+ RSD+ TEF+ L YF+LHGI+HQT+ T QQNG R + H+LNVAR+L FQ
Sbjct: 605 QVKMIRSDNGTEFM--CLQQYFQLHGILHQTSCTGTPQQNGRVERKHQHILNVARALRFQ 662
Query: 1170 AGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGCLCFATILID 1349
PL W +CILTA YLINR PS +L+GK P+E+V GN HLR FGCLC+A D
Sbjct: 663 GQLPLKFWGECILTAGYLINRTPSTILQGKTPYEIVNGNPPTYDHLRVFGCLCYAHNQ-D 721
Query: 1350 KH--KFSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMKIFSFKNERKFKKLSQ 1523
++ KF+S+S + +G +K + ++F+ F++ NE F L
Sbjct: 722 RNGDKFASRSRKSVFVGYSAGQKGWKLFDLEREVFWVSRDVKFVE-----NEFPFASL-- 774
Query: 1524 ILHLK--QITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDESPHVDGTKSSSDHTSIDS 1697
+H + ++ F ++ +++ DE+D + + +E +G + +S + S
Sbjct: 775 -IHKEPSEMKLPFINAGVENHDEHIVEIDENDPTTETVTTNE---FNGVQDNSHDLELAS 830
Query: 1698 KATHNVDGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSEGNDFNIPNVVNEPITQRRS 1877
+ + + T S ++ + V + L + V S + + V Q +S
Sbjct: 831 QVVPSPEQTSSSTIENEVDKMSTVSSPLGKGHRVRQPSVK------LRDYVTNTTIQVKS 884
Query: 1878 GRTSKLPTKLSDFVLDGKVKYGIDRVVNYSKLSKENYCLSINLNKYFEPNTFHEVCKYKE 2057
+ L+ + + Y + +N K S ++ L++ EP F E +
Sbjct: 885 -------SILTPHSVSSGMSYPLTNYLNCDKFSLQHRIFLAALHEEREPVHFSEAVRDVR 937
Query: 2058 WIIAMNNEIKALNRNETWEITELTPGRKAIGSKWIYKIKYMSNGDIERYKARLVANGYNQ 2237
W AM NEI AL N TW+I L G+K +G KWIYKIKY S+G IER+KARLV G +Q
Sbjct: 938 WRDAMTNEIDALQNNGTWDIIALPAGKKPLGCKWIYKIKYHSDGSIERFKARLVVLGNHQ 997
Query: 2238 REGVDYDETFSLVVKIVTIRFLISLAVNNGWPLFQLDVKNAFLYGNLTEGVYMTLP 2405
EG+DYDETF+ V K+VTIR ++++AV W L Q+DV NAFL+G+L E VYM LP
Sbjct: 998 VEGIDYDETFAPVAKMVTIRTILAVAVAKDWELHQMDVHNAFLHGDLDEAVYMKLP 1053
Score = 220 bits (560), Expect(3) = 0.0
Identities = 102/202 (50%), Positives = 140/202 (69%)
Frame = +1
Query: 2893 YQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGILISKG 3072
Y++L+ +LIYL TRP++SY VH LS+F+ P + + + LR++RYLK PG+G+L+ +
Sbjct: 1213 YRRLVGRLIYLCFTRPELSYSVHVLSQFMQQPRQEHWRAALRVVRYLKGQPGQGVLLKRE 1272
Query: 3073 SNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRALAST 3252
S+L LY + DSDWA C TRRS+TG+ +FLG S ISWK KKQ+ SRSSA AEYR++A+T
Sbjct: 1273 SDLRLYGWCDSDWATCPLTRRSITGWIVFLGQSPISWKTKKQHTVSRSSAGAEYRSMANT 1332
Query: 3253 TCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRDKITE 3432
TCE+ WL LL L I P+ +YCDN+ A+ IA NP FH+RTKH E D H IRD+I +
Sbjct: 1333 TCELKWLQGLLLSLGIPHSVPMNLYCDNQAALHIAKNPVFHERTKHIEVDCHLIRDEIQQ 1392
Query: 3433 GIRKPLKIESAKNTTDILTKGL 3498
+P + + D+ TK L
Sbjct: 1393 NRIQPTHVSTHSQLADLFTKPL 1414
Score = 130 bits (327), Expect(3) = 0.0
Identities = 67/142 (47%), Positives = 92/142 (64%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G+ + VC+L+KS+YGL+ APR W KL L + GF+ S+SD+SLF K
Sbjct: 1053 PPGFLVSQNGLVCRLRKSIYGLRQAPRCWFAKLSNALDQYGFQRSQSDHSLFTFRKKGIQ 1112
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
+ +LVYVDD+V+ ++ EE+ K K +L F +KDLG LKYFLG+EV + G+ L Q K
Sbjct: 1113 LVVLVYVDDLVIAGNHGEEIAKFKSYLHQCFHMKDLGKLKYFLGVEVARSSTGLFLCQRK 1172
Query: 2762 YCLELLTEYGLLACKPSQTPIE 2827
Y L+++ E GLL KP TPIE
Sbjct: 1173 YALDIIAETGLLGGKPVPTPIE 1194
>gb|PNX93517.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1465
Score = 397 bits (1020), Expect(3) = 0.0
Identities = 275/778 (35%), Positives = 409/778 (52%), Gaps = 13/778 (1%)
Frame = +3
Query: 111 LSAEQVQQLISLLNCSKNSNNVHTHMGGTYFCGNTSFKIYKTDKGWIIDSGANQHMVTSK 290
L+++Q+Q L SLLN K + + G SF WIID+GA+ HM
Sbjct: 346 LTSDQLQTLSSLLNNVKLGSIEKLN-------GKCSFL------PWIIDTGASHHMTGQL 392
Query: 291 DKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTVNLLSVHKLA 470
+ L NI +IF+ + + PNG K N+ L +++ L +VLYVP NL+SV +L
Sbjct: 393 ECLTNIRNIFECSIGL--PNGEETVATKEGNVVLNERLQLKNVLYVPSLQCNLISVSQLL 450
Query: 471 RDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSNNIISCHSNSLW 650
+++ + F + C +QD + + G QR+ LY+L +K+N +S L
Sbjct: 451 KNSNYVVQFTDKFCLVQDPTLRTPIGAGEQREGLYYLRGMVKAAAMKTNKEVSF---DLL 507
Query: 651 HNRLGHLSDQVLKALKH-KIDFKGDFNSSPCDIWHYSKQTREPLPLSDHKSTSVGELIHL 827
H RLGH S +VL+ L + + K + + C+I +KQ+R+ P+S++K+ + LIH
Sbjct: 508 HQRLGHASLKVLQMLPNVRPSSKNNSCTQTCEICLRAKQSRDNFPVSENKAATPFHLIHC 567
Query: 828 DVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFHNYLKNKFNKAVKI 1004
D+WGPY+ + G KYFLT+VDD+SR VW+Y L K EV+ ++ +F ++ +F+ VKI
Sbjct: 568 DLWGPYRNATFCGAKYFLTIVDDFSRAVWIYLLIDKTEVSKHLYQFLAMVERQFSAQVKI 627
Query: 1005 FRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNVARSLLFQAGTP 1181
RSD+ TEF + F+ GIIH+T+ T QQNG R + H+LNVAR+L FQA P
Sbjct: 628 IRSDNGTEFT--CMKQNFRDCGIIHETSCVGTPQQNGRVERKHRHILNVARALRFQAQLP 685
Query: 1182 LNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGCLCFATILIDK-HK 1358
+ W +C L A YLINR P+ L GK P+EL++G ++ HLR GCL +A K K
Sbjct: 686 IEFWGECALAACYLINRTPTKTLSGKTPYELLYGKAPSLEHLRVVGCLAYAHNQHHKGDK 745
Query: 1359 FSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMKIFSFKNERKFKKLSQILHLK 1538
F+++S +G K ++ IF+ F + NE F + +
Sbjct: 746 FATRSRKCVFVGYPYGTKGWRMYDLELGIFFNSRDVVFCE-----NEFPF---AAAIKTS 797
Query: 1539 QITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDESP--HVDGTKSSSDHTSIDSKATHN 1712
Q+ S V+ S +L N E D+ + DE P V T+ ++ H + T
Sbjct: 798 QLPSD------VQASFSLNNNIEDDSFQYVSNIDEFPSTQVVETRMTNGHDELVDTQTDL 851
Query: 1713 VDGTESLNNDSGATQDDL-VITSLSDNNIVDS-NSTSEGNDFNIPNV-----VNEPITQR 1871
+ + + + D L V +++ I D+ + G+ P+ V I++
Sbjct: 852 TNMSHDVGSSVVELDDTLPVAEEIAEPTITDNIENLGRGHRIKFPSTKLHGYVRNTISKI 911
Query: 1872 RSGRTSKLPTKLSDFVLDGKVKYGIDRVVNYSKLSKENYCLSINLNKYFEPNTFHEVCKY 2051
S PT Y + + VNY+ S + + EP +F E K
Sbjct: 912 FLSDCSTAPT------CPVGTLYPLSQYVNYANFSPRHRNFLAAITAATEPQSFAEAVKD 965
Query: 2052 KEWIIAMNNEIKALNRNETWEITELTPGRKAIGSKWIYKIKYMSNGDIERYKARLVANGY 2231
W AM EI+AL +N TW + L P +KAIGSKW+Y+IKY S+G IERYKARLV G
Sbjct: 966 VRWRNAMQLEIEALEKNGTWIVETLPPNKKAIGSKWVYRIKYHSDGTIERYKARLVILGN 1025
Query: 2232 NQREGVDYDETFSLVVKIVTIRFLISLAVNNGWPLFQLDVKNAFLYGNLTEGVYMTLP 2405
NQ EG+DY ETF+ VVK+VT+R +++A W L Q+DV NAFL+G+L E VYM LP
Sbjct: 1026 NQVEGLDYHETFAPVVKMVTVRTFLAVAAAKCWELHQMDVHNAFLHGDLDEEVYMKLP 1083
Score = 222 bits (565), Expect(3) = 0.0
Identities = 103/207 (49%), Positives = 147/207 (71%)
Frame = +1
Query: 2878 KNITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGI 3057
+N Y++L+ +L+YLT TR ++SY VH L++F+H PLE + +R++RYLK PG+GI
Sbjct: 1238 QNPDRYRRLVGRLVYLTVTRAELSYCVHMLAQFMHKPLEEHWNAAIRVVRYLKGNPGQGI 1297
Query: 3058 LISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYR 3237
L+ +L LY++ DSDWA C +RRS+TG+ +FLGNS ISWK KKQNV SRSSA+AEYR
Sbjct: 1298 LLKAACDLQLYAWCDSDWAGCPLSRRSLTGWIVFLGNSPISWKTKKQNVVSRSSAEAEYR 1357
Query: 3238 ALASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIR 3417
++A+TTCE+ WL +LL L + P+ +YCD++ A+ IA+NP FH+RTKH E D HF+R
Sbjct: 1358 SMATTTCELKWLKALLLSLGVSHSLPMRIYCDSQSALHIAANPVFHERTKHIEVDCHFLR 1417
Query: 3418 DKITEGIRKPLKIESAKNTTDILTKGL 3498
D++ +G + + DI TK L
Sbjct: 1418 DELLKGNISTHHVSTKIQLADIFTKAL 1444
Score = 134 bits (338), Expect(3) = 0.0
Identities = 68/142 (47%), Positives = 93/142 (65%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G+ S + C+L+KSLYGLK APR W KL L++ GF S SDYSLF +++
Sbjct: 1083 PPGFRSSTPNQACRLRKSLYGLKQAPRCWFAKLKSALLRYGFTQSYSDYSLFTLHRDSAE 1142
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
+ +LVYVDD++++ ++ + + K +L T F +KDLG LKYFLGIEV N NGI L Q K
Sbjct: 1143 LYVLVYVDDLIISGNDNKSIESFKSYLSTCFHMKDLGTLKYFLGIEVARNSNGIFLCQQK 1202
Query: 2762 YCLELLTEYGLLACKPSQTPIE 2827
Y L+++ E GLL KP P+E
Sbjct: 1203 YTLDIIAEAGLLGSKPVGFPLE 1224
>gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1346
Score = 378 bits (971), Expect(3) = 0.0
Identities = 249/752 (33%), Positives = 385/752 (51%), Gaps = 28/752 (3%)
Frame = +3
Query: 246 WIIDSGANQHMVTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLY 425
WIIDSGA+ H+ S + +I + +++ PNG + A + + +VLY
Sbjct: 295 WIIDSGASHHICASLHWFHSYSEINPMIIKL--PNGNHVTTKYAGTVVFSSSFSITNVLY 352
Query: 426 VPEYTVNLLSVHKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNF 605
VP +TVNL+SV +L + F + C IQ+ + K + +G R LY+L T
Sbjct: 353 VPTFTVNLISVSQLCHHTPYTLNFTDTICSIQEQKSLKMIGLGESRDGLYYLTQTNKECA 412
Query: 606 IKSNNIISCHS---------NSLWHNRLGHLSDQVLKALKHKIDFKGDFNSSPCDIWHYS 758
+ NI S S N++WH RLGHLS + L + F + +SS CDI H++
Sbjct: 413 SSNYNISSIFSSANNVHIPENAIWHFRLGHLSSSRIALLHSQFPFIVNDSSSVCDICHFA 472
Query: 759 KQTREPLPLSDHKSTSVGELIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKN 935
K + P S HK+ +LIH D+WGP + S YFLT VDD+SR W+ +K K+
Sbjct: 473 KHRKLPFVHSYHKAIKCFDLIHFDIWGPISIKSVHNHAYFLTAVDDHSRYTWITLMKNKS 532
Query: 936 EVADNIIEFHNYLKNKFNKAVKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNG 1112
E ++ F +++K ++N +VK R+D+ EF+ + ++ GI+HQT+ + QQNG
Sbjct: 533 EARLHVQNFIHFIKTQYNHSVKSIRTDNGPEFL---MPDFYASKGILHQTSCVDSPQQNG 589
Query: 1113 IA*RNNIHLLNVARSLLFQAGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNEL 1292
R + +LN+ R+LL Q+ P + W + A Y++NR+P+ L+ K P+ L++
Sbjct: 590 RVERKHQQILNIGRALLVQSNLPKSFWCYAVSHAVYIMNRVPAPNLQNKSPYTLLYNTAP 649
Query: 1293 NISHLRSFGCLCFA-TILIDKHKFSSKSENAFLLGTLTQKKVINYL-ACKIKIFYTQGMS 1466
+ L+ FG L FA T+ + K ++ LG + K + L IF ++ ++
Sbjct: 650 DFDTLKVFGSLVFASTLQSHRTKLDLRARKCVFLGYKSGVKGVVLLDLLNNSIFLSRDVT 709
Query: 1467 SFMKIFSFKNERKFKKLSQILHLKQITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDES 1646
IF +++ T ++ H + +PN +SD D D S
Sbjct: 710 HHEHIFPYQSSS--------------PKTPWEYHSISPTPN-----DSDITLD---SDIS 747
Query: 1647 PHVDGTKS-SSDHTSIDSKATHNVDGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSEG 1823
++ +S S H+S+ + +++ND T +SD S ST
Sbjct: 748 LDINAEQSPSPPHSSL----------SPNISND----------TVISDT----STSTPPP 783
Query: 1824 NDFN-IPNVVNEPITQRRSGRTSKLPTKLSDFVLDG-------------KVKYGIDRVVN 1961
D N P + ++PI QRR+ P LSD+V K KY + +
Sbjct: 784 KDHNDSPLLHSKPIRQRRA------PLHLSDYVCHNTSPTSHESLTSGTKSKYPLSSFHS 837
Query: 1962 YSKLSKENYCLSINLNKYFEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELTPGRK 2141
+ LS + S+++ EP ++ E K++ W+ AM E+ AL +N TW+I EL P K
Sbjct: 838 LTLLSPSHKAFSMSITHCTEPQSYEEASKHEHWVTAMKEELNALAKNCTWKIVELPPHTK 897
Query: 2142 AIGSKWIYKIKYMSNGDIERYKARLVANGYNQREGVDYDETFSLVVKIVTIRFLISLAVN 2321
IG KW+YK+K+ +NG IERYKARLVA GYNQ EG+DY ETFS V KI T+R L+++A
Sbjct: 898 PIGCKWVYKVKHKANGQIERYKARLVAKGYNQVEGIDYFETFSPVAKITTVRTLLAVAAI 957
Query: 2322 NGWPLFQLDVKNAFLYGNLTEGVYMTLPGDIS 2417
W L QLDV NAFL+G+L E VYM +P ++
Sbjct: 958 KNWHLHQLDVNNAFLHGDLQEDVYMKIPDGVT 989
Score = 218 bits (556), Expect(3) = 0.0
Identities = 96/206 (46%), Positives = 141/206 (68%)
Frame = +1
Query: 2881 NITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGIL 3060
+I+GY++++ KL+YL TRPDI++ LS+F+ +P + R+LRYLK PG+GI
Sbjct: 1141 DISGYRRIVGKLLYLNTTRPDIAFATQQLSQFMQAPTNVHFNAACRVLRYLKNNPGQGIF 1200
Query: 3061 ISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRA 3240
S+ S + L YSD+DWA C +R+S++G+ F+G SL+SW+ KKQ SRSS++AEYRA
Sbjct: 1201 FSRTSEMQLIGYSDADWAGCMDSRKSISGYCFFIGKSLVSWRAKKQATVSRSSSEAEYRA 1260
Query: 3241 LASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRD 3420
L+S CE+ WL L DL +++ + T+YCDN+ A+ IASNP FH+RTKH E D H +R+
Sbjct: 1261 LSSAACELQWLLYLFADLRVQLTRTPTLYCDNQSAVHIASNPVFHERTKHLEIDCHLVRE 1320
Query: 3421 KITEGIRKPLKIESAKNTTDILTKGL 3498
K+ +G K L + ++ D LTK L
Sbjct: 1321 KLLKGTLKLLPVSTSDQVADFLTKAL 1346
Score = 156 bits (394), Expect(3) = 0.0
Identities = 76/145 (52%), Positives = 101/145 (69%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G VCKL+KSLYGLK A RKW EKL L+K G+ S SDYSLF TK N F
Sbjct: 985 PDGVTCAKPNSVCKLQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSLFTLTKGNTF 1044
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
LLVYVDDI++ +++E +++K+ L+ F+IK+LG LKYFLG+EV + GI +SQ K
Sbjct: 1045 TALLVYVDDIILAGDSIDEFDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRLGITISQRK 1104
Query: 2762 YCLELLTEYGLLACKPSQTPIESKL 2836
YCL+LL + GLL CKP+ TP+++ +
Sbjct: 1105 YCLDLLKDSGLLGCKPASTPLDTSI 1129
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 418 bits (1075), Expect(3) = 0.0
Identities = 282/793 (35%), Positives = 402/793 (50%), Gaps = 31/793 (3%)
Frame = +3
Query: 120 EQVQQLISLLNCSKNSNNVHTHMGGTYFCGNTSFKIYKTDKGWIIDSGANQHMVTSKDKL 299
+Q+ QLISLL + S++ G T +ID+GA+ HM L
Sbjct: 341 DQIAQLISLLQAQRPSSSSERLSGNTCLTDG------------VIDTGASHHMTGDCSIL 388
Query: 300 ENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTVNLLSVHKLARDN 479
++ DI + P+G ++ K L L D L+DVL+VP++ L+SV KL +
Sbjct: 389 VDVFDI--TPSPVTKPDGKASQATKCGTLLLHDSYKLHDVLFVPDFDCTLISVSKLLKQT 446
Query: 480 KLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSNNIISCHSNSLWHNR 659
F + C++QD + + G +R+ +Y+ K+++ + S LWH R
Sbjct: 447 SSIAIFTDTFCFLQDRFLRTLIGAGEEREGVYYFTGVLAPRVHKASSDFAI-SGDLWHRR 505
Query: 660 LGHLSDQVLKALKHKIDFKGDFNS-SPCDIWHYSKQTREPLPLSDHKSTSVGELIHLDVW 836
LGH S VL +L F+ CD SKQTRE P+S++K+ LIH DVW
Sbjct: 506 LGHPSTSVLLSLPECNRSSQGFDKIDSCDTCFRSKQTREVFPISNNKTMECFSLIHGDVW 565
Query: 837 GPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFHNYLKNKFNKAVKIFRS 1013
GPY+ S G YFLT+VDDYSR VW Y + +K EV+ I F + +F K VK FR+
Sbjct: 566 GPYRTPSTTGAVYFLTLVDDYSRSVWTYLMSSKTEVSQLIKNFCAMSERQFGKQVKAFRT 625
Query: 1014 DD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNVARSLLFQAGTPLNM 1190
D+ TEF+ L YF+ HGI+HQT+ T QQNG R + H+LNVAR+ LFQ P+
Sbjct: 626 DNGTEFM--CLTPYFQTHGILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKF 683
Query: 1191 WTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGCLCFATIL-IDKHKFSS 1367
W + ILTAT+LINR PS VLKGK P+EL+FG + LRSFGCLC+A I +K KF+S
Sbjct: 684 WGESILTATHLINRTPSAVLKGKTPYELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFTS 743
Query: 1368 KSENAFLLGTLTQKKVINYLACKI-KIFYTQGMSSFMKIFSFKNERKFKKLSQILHLKQI 1544
+S +G KK + KIF ++ + I+ + + +
Sbjct: 744 RSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRFHEDIYPYATATQSNVPLPPPTPPMV 803
Query: 1545 TSTFF-------DSHYVRRSPNLLPNDESDAHNDQGSDDESPHVDG----------TKSS 1673
+F DS V S + P S D+SP SS
Sbjct: 804 NDDWFLPISTQVDSTNVDSSSSSSPAQSGSIDQPPRSIDQSPSTSTNPVPEEIGSIVPSS 863
Query: 1674 SDHTSIDSKATHNV---DGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSEGNDFNIPN 1844
S SID ++T ++ D TE L+ +T + L + + DF + N
Sbjct: 864 SPSRSID-RSTSDLSASDTTELLSTGESSTPSSPGLPELLGKGCREKKKSVLLKDF-VTN 921
Query: 1845 VVNEPITQRRSGRT------SKLPTKLSDFVLDGKVKYGIDRVVNYSKLSKENYCLSINL 2006
++ T + + S LPT LS + GK Y + + S S + +
Sbjct: 922 TTSKKKTASHNIHSPSQVLPSGLPTSLSADSVSGKTLYPLSDFLTNSGYSANHIAFMAAI 981
Query: 2007 NKYFEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELTPGRKAIGSKWIYKIKYMSN 2186
EP F + KEW AM+ EI AL N TW+IT+L G+KAI SKW+YK+KY S+
Sbjct: 982 LDSNEPKHFKDAILIKEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKWVYKLKYNSD 1041
Query: 2187 GDIERYKARLVANGYNQREGVDYDETFSLVVKIVTIRFLISLAVNNGWPLFQLDVKNAFL 2366
G +ER+KARLV G +Q+EGVD+ ETF+ V K+ T+R ++++A W + Q+DV NAFL
Sbjct: 1042 GTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFL 1101
Query: 2367 YGNLTEGVYMTLP 2405
+G+L E VYM LP
Sbjct: 1102 HGDLEEEVYMRLP 1114
Score = 195 bits (495), Expect(3) = 0.0
Identities = 93/202 (46%), Positives = 139/202 (68%)
Frame = +1
Query: 2893 YQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGILISKG 3072
Y++L+ + IYLT TRPD+SY VH LS+F+ +PL ++ + LR++RYLK +P +GI +
Sbjct: 1274 YRRLVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSD 1333
Query: 3073 SNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRALAST 3252
S+L + +Y DSD+ C TRRS++ + ++LG+S ISWK KKQ+ S SSA+AEYRA+A T
Sbjct: 1334 SSLIINAYCDSDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYT 1393
Query: 3253 TCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRDKITE 3432
E+ WL +LL+DL + P+ ++CD++ AI IA+NP FH+RTKH E D H +RD + +
Sbjct: 1394 LKELKWLKALLKDLGVHHSSPMKLHCDSEAAIHIAANPVFHERTKHIESDCHKVRDAVLD 1453
Query: 3433 GIRKPLKIESAKNTTDILTKGL 3498
+ I + D+LTK L
Sbjct: 1454 KLITTEHIYTEDQVADLLTKSL 1475
Score = 137 bits (346), Expect(3) = 0.0
Identities = 70/141 (49%), Positives = 90/141 (63%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G+ + +VC+L+KSLYGLK APR W KL L GF S DYSLF +
Sbjct: 1114 PPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTI 1173
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
I +LVYVDD++V +NL+ +++ K L F +KDLG LKYFLG+EV +G CLSQ K
Sbjct: 1174 IHVLVYVDDLIVAGNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRK 1233
Query: 2762 YCLELLTEYGLLACKPSQTPI 2824
Y L+++ E GLL CKPS PI
Sbjct: 1234 YALDIVKETGLLGCKPSAVPI 1254
>gb|PNY12226.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1464
Score = 387 bits (994), Expect(3) = 0.0
Identities = 256/786 (32%), Positives = 399/786 (50%), Gaps = 21/786 (2%)
Frame = +3
Query: 111 LSAEQVQQLISLLNCSKNSNNVHTHMGGTYFCGNTSFK---------IYKTDKGWIIDSG 263
LSA +++ L SLL K S H T + + + + K+ WIIDSG
Sbjct: 335 LSAAELEALRSLLKNHKPSAPSQLHQFTTASSSSPTEETRGTASLNALSKSASLWIIDSG 394
Query: 264 ANQHMVTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTV 443
A H S + + + + +++ PNG++ ++ + + ++L +VLY+P +T
Sbjct: 395 ATDHACYSLNMFSHYTKVPPIPVRL--PNGSTVTTDIIGDIHITNTLVLTNVLYLPHFTY 452
Query: 444 NLLSVHKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSNNI 623
NL+SV K+ F + C I + Q QK + G + LY+L+ T + S+
Sbjct: 453 NLISVSKVTHQLACTFTFASNVCTIHNSQ-QKMIGSGKKLNGLYYLEGTNASVHSLSSGT 511
Query: 624 I----SCHSNSLWHNRLGHLSDQVLKALKHKIDFKGDFNSS-PCDIWHYSKQTREPLPLS 788
+ S ++LWH R GH S+ L+ + HK+ N CD+ H +KQ + LS
Sbjct: 512 VCTFFSIPQSALWHFRFGHASNTRLEIM-HKLYPSISINKDCVCDVCHLAKQKKLSYSLS 570
Query: 789 DHKSTSVGELIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFH 965
++T +L+H+D+WGPY + G KYFLT+VDD+SR WV LK KNEVA ++ F
Sbjct: 571 TSQTTKCFDLLHMDIWGPYSTATLHGHKYFLTIVDDFSRFTWVILLKGKNEVASHVQHFI 630
Query: 966 NYLKNKFNKAVKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLL 1142
++N+F+ VKI RSD+ EF + +++ GI+HQT+ YT QQNG R + +L
Sbjct: 631 QLVENQFDSTVKIVRSDNGPEFS---IPSFYASKGIVHQTSCVYTPQQNGRVERKHQSIL 687
Query: 1143 NVARSLLFQAGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGC 1322
+AR+LL Q+ P W +L + YL+NR+PS V++G P+ + +IS LR FGC
Sbjct: 688 AIARALLIQSHLPAKYWGYAVLHSVYLMNRMPSVVIEGDLPYHKLHKELPDISMLRIFGC 747
Query: 1323 LCFATILIDKH--KFSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMKIFSFKN 1496
LC+ + D H K ++ LG Y G F+ + +
Sbjct: 748 LCYVS-TNDAHRLKLDHRARKCVFLG------------------YKSGTKGFVALDLHSS 788
Query: 1497 ERKFKKLSQILHLKQITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDESPHVDGTKSSS 1676
E +S+ + +++ + P +++ D P+ +++
Sbjct: 789 E---VVVSRNVQFEELIFPYTSQ----------PKSQTNWEFFVPPIDPIPYTTVNPTNN 835
Query: 1677 DHTSIDSKATHNVDGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSEGNDFNIPNVVNE 1856
D T + + TES T+ I + + N S+ PN
Sbjct: 836 DATPTAIEPDEPIPSTES---PVPQTEPSQSIQQTEPSQSIQQNEPSQ--SIQPPN---- 886
Query: 1857 PITQRRSGRTSKLPTKLSDFVLDG---KVKYGIDRVVNYSKLSKENYCLSINLNKYFEPN 2027
P R+S R +K P+ L+D+V G KY I +++ +S + +++L EP
Sbjct: 887 PPPLRKSTRITKPPSHLADYVCHGIAHSTKYPISNYTSHNHISSQQLTYTLSLMTETEPT 946
Query: 2028 TFHEVCKYKEWIIAMNNEIKALNRNETWEITELTPGRKAIGSKWIYKIKYMSNGDIERYK 2207
++ E CK++ W+ AM +E++AL +N+TW I L G K IGSKW+YKIK S+G IERYK
Sbjct: 947 SYFEACKHEHWVKAMQSELQALEQNKTWTIVSLPTGVKPIGSKWVYKIKRKSDGSIERYK 1006
Query: 2208 ARLVANGYNQREGVDYDETFSLVVKIVTIRFLISLAVNNGWPLFQLDVKNAFLYGNLTEG 2387
ARLVA GYNQ EG+DY ETFS V K+ TIR ++++A W + QLDV NAFL+G L E
Sbjct: 1007 ARLVAKGYNQVEGIDYFETFSPVAKMTTIRVVLAIASIRNWFVHQLDVNNAFLHGELCED 1066
Query: 2388 VYMTLP 2405
VYM +P
Sbjct: 1067 VYMQIP 1072
Score = 218 bits (555), Expect(3) = 0.0
Identities = 101/206 (49%), Positives = 143/206 (69%)
Frame = +1
Query: 2881 NITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGIL 3060
+ITGY+ L+ KL+YLT+TRPDI++ V L +FL P + + K ++LRYLK PG G+
Sbjct: 1228 DITGYRTLVGKLLYLTNTRPDIAFPVQQLCQFLDCPTQLHYKAAHKVLRYLKGCPGSGLY 1287
Query: 3061 ISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRA 3240
+ S+ L ++D+DW C TRRS+TG+ FLG+SLI WK KKQ SRSS++AEYRA
Sbjct: 1288 FPRSSDTQLVGFTDADWGGCVDTRRSITGYCFFLGSSLICWKSKKQQTISRSSSEAEYRA 1347
Query: 3241 LASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRD 3420
LAS TCE+ WLT LL+DL + + + ++YCD++ AI IASNP FH+RTKH + D H +R+
Sbjct: 1348 LASGTCELQWLTYLLRDLQVTLIQQPSLYCDSQSAIHIASNPVFHERTKHLDIDCHVVRE 1407
Query: 3421 KITEGIRKPLKIESAKNTTDILTKGL 3498
++ G+ K L + + DI+TK L
Sbjct: 1408 RLQAGLMKLLPVSGFQQLADIMTKAL 1433
Score = 142 bits (358), Expect(3) = 0.0
Identities = 76/145 (52%), Positives = 94/145 (64%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G +VCKL KSLYGLK A RKW EKL Q LI + F SD +LFVK ++ F
Sbjct: 1072 PQGLEGFATDKVCKLTKSLYGLKQASRKWYEKLSQFLISHHFIQVPSDPTLFVKKTSDSF 1131
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
LLVYVDDIV+T ++ E+ +K+ L F IKDLG LK+FLG+EV + GI LSQ +
Sbjct: 1132 TALLVYVDDIVLTGDSMAEITNIKNELHHTFGIKDLGILKFFLGLEVAHSTKGITLSQRQ 1191
Query: 2762 YCLELLTEYGLLACKPSQTPIESKL 2836
YCL+LL E G L CKPS P++ L
Sbjct: 1192 YCLDLLAETGDLGCKPSSIPMDPSL 1216
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 389 bits (998), Expect(3) = 0.0
Identities = 271/790 (34%), Positives = 394/790 (49%), Gaps = 26/790 (3%)
Frame = +3
Query: 114 SAEQVQQLISLLNCSKNSNNVHTHMGGTYFCGNTSFKIYKTDKGWIIDSGANQHMVTSKD 293
+ EQ+QQL + +SN+ GN ID+ AN T D
Sbjct: 617 TTEQIQQLAQAIRALNHSNS-----------GN-------------IDAYANAAGAT--D 650
Query: 294 KLENIMDIF-DLK----LQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTVNLLSV 458
+ + M +F DLK ++ PNG ++ I + ++ L DVL VP + +NL+S
Sbjct: 651 HIVSHMSLFTDLKPSNVTTVNLPNGVASPITHTGTVIFDSQLTLKDVLCVPSFNLNLISA 710
Query: 459 HKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSNNIISCHS 638
KLA+D +I F C +QDL K + G QR LY++ TN KS
Sbjct: 711 SKLAKDQNCYIIFFPDYCILQDLVSGKMIGSGKQRGGLYYMH-PSTN---KSVVFHVSQP 766
Query: 639 NSLWHNRLGHLSDQVLKALKHKIDFKGDFNSSPCDIWHYSKQTREPLPLSDHKSTSVGEL 818
+ LWH RLGH S K L + + C I +KQTR P P S + L
Sbjct: 767 SDLWHLRLGHPSFSRFKLLSRLLPDIHKEIGNHCPICPQAKQTRLPFPKSSITTKFPFSL 826
Query: 819 IHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFHNYLKNKFNKA 995
+H DVWGP+K+ + G +YFLT+VDD+SR W++ + K+E + F ++K +F+
Sbjct: 827 LHCDVWGPHKIPAHTGSRYFLTIVDDFSRCTWIFLMHHKSETQSLLTNFVQFVKTQFHTD 886
Query: 996 VKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNVARSLLFQA 1172
V+ R D+ TEF+ L + + GI QT+ YT QQNG+ R + H+LNVARSL+FQ+
Sbjct: 887 VQTVRMDNGTEFIP--LRIFLQNKGIELQTSCIYTPQQNGVVERKHRHILNVARSLMFQS 944
Query: 1173 GTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGCLCFATILIDK 1352
PL W +C+LTA YLINR+P+ +L K PFE+++ +++HLR FGC C+ T + K
Sbjct: 945 NVPLEFWGECVLTAVYLINRIPTPLLSNKSPFEVLYNRPPSLTHLRVFGCECYVTNVHPK 1004
Query: 1353 HKFSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMKIFSFKNERKFKKLSQILH 1532
KF ++ LG KK K+ TQ +S +F +N F S
Sbjct: 1005 QKFDPRASICVFLGYPHGKK-----GYKVLDLQTQKISVSRDVFFRENIFPFHSSS---- 1055
Query: 1533 LKQITSTFFDSHYVRRSPNL-LPNDESDAHNDQGSDDESPHVDGTKSSSDHTSIDSKATH 1709
S + SP+L LP S Q T S H + S +
Sbjct: 1056 ----------SQSQQHSPSLPLPLPISFDSTPQPISLPRFSPSSTPPLSHHNPVSSPPSS 1105
Query: 1710 NVDGTESLNNDSGATQ-----DDLVITSLSDNNIVDSNSTSEGNDFNIPNVVNEPITQRR 1874
N D E L+++S A+ ++S +V SN+++ P+ +EP RR
Sbjct: 1106 NTDVPEPLSHESVASPLPSSPSPSSLSSPPSVPLVPSNTSA-------PSPTHEP-PLRR 1157
Query: 1875 SGRTSKLPTKLSDFVLDGKV-------------KYGIDRVVNYSKLSKENYCLSINLNKY 2015
S R + P D+V+ ++ +Y + +++ + S + L
Sbjct: 1158 STRHIQPPAWHHDYVMSAQLNHSSTQSSSRQGTRYPLSSHLSFFRFSPHHRAFLALLTAQ 1217
Query: 2016 FEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELTPGRKAIGSKWIYKIKYMSNGDI 2195
EP++F + W AM+ E++AL RN TWE+ L PG K IG +W+YKIKY S+G I
Sbjct: 1218 TEPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPLPPGHKPIGCRWVYKIKYHSDGTI 1277
Query: 2196 ERYKARLVANGYNQREGVDYDETFSLVVKIVTIRFLISLAVNNGWPLFQLDVKNAFLYGN 2375
ERYKARLVA GY Q G+DY ETFS K+ T+R L+++A + W + QLDV NAFL+GN
Sbjct: 1278 ERYKARLVAKGYTQVAGIDYQETFSPTAKLTTLRCLLTVAASRNWYIHQLDVHNAFLHGN 1337
Query: 2376 LTEGVYMTLP 2405
L E VYMT P
Sbjct: 1338 LQEEVYMTPP 1347
Score = 221 bits (564), Expect(3) = 0.0
Identities = 98/202 (48%), Positives = 147/202 (72%)
Frame = +1
Query: 2893 YQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGILISKG 3072
Y++L+ +LIYLT TRPDI Y V +LS+F+++P + + + LR+LRY+K +PG+G+ +
Sbjct: 1507 YRRLVGRLIYLTVTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSE 1566
Query: 3073 SNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRALAST 3252
+NL L ++ DSDW CR +RRSV+G+ +FLG+SLISWK KKQ SRSSA+AEYRA+A+T
Sbjct: 1567 NNLTLSAFCDSDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAEAEYRAMANT 1626
Query: 3253 TCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRDKITE 3432
E+ WL +L+DL +++ KP ++CDN+ A+ IA+NP FH+RTKH E D H +R+K+
Sbjct: 1627 CLELTWLRYILKDLKVELDKPAPLFCDNQAALYIAANPVFHERTKHIEIDCHIVREKLQA 1686
Query: 3433 GIRKPLKIESAKNTTDILTKGL 3498
G+ +P + + D+ TK L
Sbjct: 1687 GVIRPCYVSTKMQLADVFTKAL 1708
Score = 131 bits (329), Expect(3) = 0.0
Identities = 69/155 (44%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
Frame = +2
Query: 2390 VYDTPW-GYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKT 2566
VY TP G + VC+L+KS+YGLK A R W T+ G+ SK+DYSLF K+
Sbjct: 1342 VYMTPPPGLRRQGENLVCRLRKSIYGLKQASRNWFSTFTATVKSAGYIQSKADYSLFTKS 1401
Query: 2567 KNNHFIGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGIC 2746
+ N F +L+YVDDI++T ++L E+ +K L F IKDLG LKYFLGIE ++ GI
Sbjct: 1402 QGNKFTAILIYVDDILLTGNDLHEIKMLKTHLLKRFFIKDLGELKYFLGIEFSRSKKGIF 1461
Query: 2747 LSQIKYCLELLTEYGLLACKPSQTPIESKLIISDK 2851
+SQ KY L++L + GL KP + P+E L ++++
Sbjct: 1462 MSQRKYTLDILQDTGLTGVKPEKFPMEQNLKLTNE 1496
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 375 bits (963), Expect(3) = 0.0
Identities = 274/812 (33%), Positives = 401/812 (49%), Gaps = 47/812 (5%)
Frame = +3
Query: 111 LSAEQVQQLISLLNCSKNSNNVHTHMGGTYFCGNTSFKIYKTDKGWIIDSGANQHMVTSK 290
LS Q++QL+SLLN N + + G + + WIIDSGA H +TS
Sbjct: 359 LSEAQLKQLLSLLN--NQDENSSSKVNAVTKPGLSKV----ASRNWIIDSGATDH-ITSS 411
Query: 291 DKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTVNLLSVHKLA 470
KL + L L + P+G A I L L L+DVL VP + V+L+SV +L
Sbjct: 412 SKLLHKDKNCSLPLVL-LPSGEKANIVTKGTLPLNSVYYLHDVLSVPTFKVDLISVSRLT 470
Query: 471 RDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTN----NFIKSNNIISCH- 635
+ + F + C +QDL ++T+ +G QR LY+L T N S N +C+
Sbjct: 471 KGLNCSVTFFPYWCILQDLATRRTIGLGKQRDRLYYLVALATEKSLTNHSSSTNQPACNL 530
Query: 636 ---SNSLWHNRLGHLSDQVLKALKHKIDFKGDFNSSPCDIWHYSKQTREPLPLSDHKSTS 806
S LWH+RLGH +++ C I +KQ+R P S ST
Sbjct: 531 AISSTDLWHSRLGH-------------------SNNACPICPLAKQSRLPFGTSAISSTK 571
Query: 807 VGELIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFHNYLKNK 983
E+IH D+WG Y+ S G YFLT+VDDY+R W++ ++ K+E + F +Y+ +
Sbjct: 572 PFEIIHCDIWGRYRHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLLKRFFSYVFTQ 631
Query: 984 FNKAVKIFRSDDT-EFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNVARSL 1160
F +K FRSD+ EF + L ++F+ +G+I Q + YT QQNG+ R + H+L VAR+L
Sbjct: 632 FEFRIKTFRSDNXXEFTS--LRSFFQDNGVIFQHSCVYTPQQNGVVERKHRHILQVARAL 689
Query: 1161 LFQAGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGCLCFATI 1340
F A P W +C LTA ++INRL S +L K PFEL++ SHLR FGCL +AT
Sbjct: 690 KFHAQVPTQFWGECALTAVHIINRLXSPILSFKTPFELLYLKSPXYSHLRVFGCLAYATN 749
Query: 1341 LIDKHKFSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMKIFSFKNERKFKKLS 1520
+ HKF ++ + +G +K K K+F+ ++ + + +
Sbjct: 750 VHTSHKFDYRAMPSIFIGYPVGQKAYKLFDLSTK-----------KVFTSRDVKFHEDIF 798
Query: 1521 QILHLKQITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDESPHVDGTKSSSDHTSIDSK 1700
+ LK + +H P + AH+ S D + H + S+HTS S
Sbjct: 799 PYVSLKPNXTLPSLTHNSGPIPLV-------AHDISSSFDSTSHAL-SPLLSNHTSTXSP 850
Query: 1701 ATHNVDGTESLNNDSGATQDDLVI--TSLSDNNIVDSNST-----SEGNDF-NIPNV--- 1847
T N D + S + +L+I +S D N S ST S G F +IP+
Sbjct: 851 XTENDDFS------SPSRPSELIIEPSSQIDPNPSPSPSTTLVSPSSGPPFASIPSAPPT 904
Query: 1848 ---VNEPITQ--------RRSGRTSKLPTKLSDFV------------LDGKVK---YGID 1949
+ P T RRS R P KL D+V + G K Y +
Sbjct: 905 ETPIFSPETHSPKPATPLRRSSRHIAPPIKLHDYVCSHVSSNQSSSLIPGPTKGTRYPLA 964
Query: 1950 RVVNYSKLSKENYCLSINLNKYFEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELT 2129
V+Y + + EP ++ E + EW AM +E++AL N TW +T L
Sbjct: 965 NYVSYHRYKPAYRSFVAQHSAVTEPRSYSEAAAHPEWQKAMRSELQALQANGTWSLTPLP 1024
Query: 2130 PGRKAIGSKWIYKIKYMSNGDIERYKARLVANGYNQREGVDYDETFSLVVKIVTIRFLIS 2309
G+ IG +W+YKIK+ S+G IERYKARLVA G+ Q EGVDY +TFS KI+++R L++
Sbjct: 1025 AGKTPIGYRWVYKIKHRSDGSIERYKARLVAKGFTQLEGVDYQDTFSPTAKIISVRCLLA 1084
Query: 2310 LAVNNGWPLFQLDVKNAFLYGNLTEGVYMTLP 2405
LA G + Q+DV NAFL+G+L E +YM+ P
Sbjct: 1085 LAAARGXSIHQMDVNNAFLHGDLHEEIYMSPP 1116
Score = 224 bits (572), Expect(3) = 0.0
Identities = 104/202 (51%), Positives = 140/202 (69%)
Frame = +1
Query: 2893 YQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGILISKG 3072
Y++L+ +LIYLT +RPDI+Y VH LSRF+H P +++++ R++RYLK APG+G+ S
Sbjct: 1276 YRRLVGRLIYLTVSRPDITYAVHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSN 1335
Query: 3073 SNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRALAST 3252
++ L Y DSDWA C TRRS TG+ +FLG SLISW+ K+Q S SSA+AEYRA+
Sbjct: 1336 NDFRLRXYCDSDWAGCPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGA 1395
Query: 3253 TCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRDKITE 3432
CE+ WL LL+DL + +P +YCDNK A+ IA+NP FH+RT+H E D H+IRDKI +
Sbjct: 1396 CCELTWLRYLLKDLGVLHKEPALLYCDNKAALHIAANPVFHERTRHIEMDCHYIRDKIQD 1455
Query: 3433 GIRKPLKIESAKNTTDILTKGL 3498
G + SA DILTK L
Sbjct: 1456 GSIITRHVSSAHQLADILTKPL 1477
Score = 138 bits (348), Expect(3) = 0.0
Identities = 69/146 (47%), Positives = 97/146 (66%)
Frame = +2
Query: 2435 VCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHFIGLLVYVDDIV 2614
VC+L KSLYGLK A R+W K + + G+ S++DYSLF + + F LL+YVDDI+
Sbjct: 1128 VCRLHKSLYGLKQASRQWFAKFSEAIQSAGYAQSRADYSLFTRKQGKSFTALLIYVDDIL 1187
Query: 2615 VTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIKYCLELLTEYGL 2794
+T ++ + K FL ++F +KDLG+LKYFLGIEV ++NGI +SQ KY LE++ + GL
Sbjct: 1188 ITGNDPVSIATTKKFLHSHFHLKDLGDLKYFLGIEVSASKNGIFISQRKYALEIIEDAGL 1247
Query: 2795 LACKPSQTPIESKLIISDKPIHKKDK 2872
L P TP+E L +SDK KD+
Sbjct: 1248 LGAAPIDTPMERGLKLSDKSDLLKDQ 1273
>gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1394
Score = 390 bits (1001), Expect(3) = 0.0
Identities = 266/793 (33%), Positives = 408/793 (51%), Gaps = 24/793 (3%)
Frame = +3
Query: 114 SAEQVQQLISLLNCSKNSNNVHTHMGGTYFCGNTSFKIYKTDKGWIIDSGANQHMVTSKD 293
S +Q L++LL +K +++ H + G +S WI+DSGA H+ +K
Sbjct: 291 SKDQYHALLALLQHTKAHSSLVNH-SSVHNSGTSS-----AFNHWIVDSGATDHICPTKS 344
Query: 294 KLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEYTVNLLSVHKLAR 473
++ + +++ PN T+ + N+ + D ++L DVL+VPE++V+L+SV KL
Sbjct: 345 LFHDLRATKPIPIKL--PNSTTVIANFSGNIHIGD-LLLADVLFVPEFSVSLISVPKLVS 401
Query: 474 DNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNN--------FIKSNNII- 626
F + C+ H K + + LY L+ + N I +NI
Sbjct: 402 TIDCMAVFCDSHCFFFQKSHFKMIGAARKIDGLYCLEESNDLNCTKVLQHSVINKSNISV 461
Query: 627 --SCHSNSLWHNRLGHLSDQVLKALKHKIDFKGDFNSSPCDIWHYSKQTREPLPLSDHKS 800
+ ++ +LWH+RLGH S+ +L+ L + + N +PCD H++K + P P+ KS
Sbjct: 462 VNAVNTGALWHHRLGHTSNSILQLLSSQYNDIIYKNCTPCDTCHFAKHKKLPFPVCISKS 521
Query: 801 TSVGELIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEFHNYLK 977
+ + EL+H D+WGP S +G KYFLT+VDD+SR WV+ LK+K EV + +F + ++
Sbjct: 522 SHLFELLHADIWGPLHTISIDGHKYFLTLVDDFSRFTWVHLLKSKAEVKTVLPKFIHLIE 581
Query: 978 NKFNKAVKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHLLNVAR 1154
N+F +K RSD+ EF +L +F GI H+T+ T QQNGI R + H+LNVAR
Sbjct: 582 NQFGIKLKRLRSDNGKEF---FLTDFFSSKGIFHETSCIETPQQNGIVERKHQHILNVAR 638
Query: 1155 SLLFQAGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFGCLCFA 1334
+LLFQ+G W+ I A +LINRLP+ L+ K P+E VFG ++S LR FGCL FA
Sbjct: 639 ALLFQSGLSSVFWSYAIKHAVHLINRLPTPFLENKSPYESVFGKIPDLSTLRVFGCLAFA 698
Query: 1335 -TILIDKHKFSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMKIFSFKNERKFK 1511
TI K ++ LG + G+ ++ +F+ +
Sbjct: 699 NTITSGITKLDKRASKCIFLG------------------FKPGVKGYL-LFNLTTKSFLL 739
Query: 1512 KLSQILHLKQITSTFFDSH--YVRRSPNLLPNDESDAHNDQGSDDESPHVDGTKSSSDHT 1685
+ I F++SH Y SP++ N H GT +S
Sbjct: 740 SRNVI---------FYESHFPYASNSPSVSNN----------------HTTGTTASQQ-- 772
Query: 1686 SIDSKATHNVDGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSEGNDFNIPNVVNEPIT 1865
S DS ++ N T D +++S D+N V+ + + +V++P
Sbjct: 773 SFDSLIAFDIISAIPNN----VTSD--IVSSNIDHNAVEPVLQFNDDSNDAVQIVDQP-- 824
Query: 1866 QRRSGRTSKLPTKLSDF---VLDGK-----VKYGIDRVVNYSKLSKENYCLSINLNKYFE 2021
R S R K P LSD+ L Y + ++YS S + ++L+ E
Sbjct: 825 TRISTRPRKPPAYLSDYDCPTLSSANTSCCTPYPLHSYLSYSNCSDSHTAFCMSLSATIE 884
Query: 2022 PNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELTPGRKAIGSKWIYKIKYMSNGDIER 2201
P +F E CK+ W AM EI+AL RN+TW + L P ++ +G KW+YK K ++G IER
Sbjct: 885 PTSFKEACKHDHWQQAMLAEIQALERNKTWSLVRLPPKKRVVGCKWVYKTKLNADGSIER 944
Query: 2202 YKARLVANGYNQREGVDYDETFSLVVKIVTIRFLISLAVNNGWPLFQLDVKNAFLYGNLT 2381
+KARLVA G+ Q EG+D+ ETFS VVK+ T+RFL+S+AV++ W L QLDV NAFL+G+L
Sbjct: 945 HKARLVAKGFTQTEGMDFFETFSPVVKLTTVRFLLSVAVSHNWFLHQLDVDNAFLHGDLD 1004
Query: 2382 EGVYMTLPGDISL 2420
VYM P + L
Sbjct: 1005 VEVYMKPPPGLIL 1017
Score = 205 bits (522), Expect(3) = 0.0
Identities = 100/204 (49%), Positives = 132/204 (64%)
Frame = +1
Query: 2887 TGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGILIS 3066
T Y++L+ KL YLT+TRPDIS+ V +S+F+ P S+L RIL+YLK PG G+
Sbjct: 1170 TAYRRLIGKLQYLTNTRPDISFAVQQVSQFMSKPRYSHLNAAFRILKYLKGCPGLGLFYP 1229
Query: 3067 KGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYRALA 3246
+ + ++SDSDWA C TR+S TG+ +F GN LISWK KKQ+ SRSS +AEYRALA
Sbjct: 1230 SANPHRIQAFSDSDWATCCITRKSTTGYCVFYGNCLISWKSKKQSTVSRSSTEAEYRALA 1289
Query: 3247 STTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIRDKI 3426
S CE+ WL + DL ++I P +CDN+ AIQ+A NP FH+RTKH E D H IR KI
Sbjct: 1290 SVACELQWLKYVADDLCLQIPLPFPTFCDNQSAIQLAKNPSFHERTKHIEVDCHLIRAKI 1349
Query: 3427 TEGIRKPLKIESAKNTTDILTKGL 3498
+G+ + S D+ TK L
Sbjct: 1350 LDGLIVLSHVPSKHQLADMFTKSL 1373
Score = 140 bits (354), Expect(3) = 0.0
Identities = 69/149 (46%), Positives = 95/149 (63%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G VCKL KSLYGL+ A R+ N KL LI GF S +D+SLF++ + F
Sbjct: 1012 PPGLILPEPHLVCKLHKSLYGLRQASRQGNSKLTSALISYGFSQSPADHSLFIRHSSTSF 1071
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
LLVYVDDIV+T +++++ VK FL F+IKDLGNLK FLG +V ++ G+ L+Q K
Sbjct: 1072 TALLVYVDDIVLTGDSIQDIVAVKKFLHHEFRIKDLGNLKLFLGFDVARSQQGLILNQRK 1131
Query: 2762 YCLELLTEYGLLACKPSQTPIESKLIISD 2848
YCL++L E+G CKP+ +P + + D
Sbjct: 1132 YCLDILAEFGFTGCKPANSPSNPTVKLKD 1160
>ref|XP_024196177.1| uncharacterized protein LOC112199378 [Rosa chinensis]
Length = 2337
Score = 384 bits (985), Expect(3) = 0.0
Identities = 254/748 (33%), Positives = 371/748 (49%), Gaps = 28/748 (3%)
Frame = +3
Query: 258 SGANQHMVTSKDKLENIMDIFDLKLQIDHPNGTSAYIQKAVNLRLRDKIILYDVLYVPEY 437
SGA H+ + + L N++ + PNG A I + + L DVL P +
Sbjct: 638 SGATDHITSIPNSLSNLVPTPSFP-PVKLPNGEHAPIHSIGDFSFHSNLRLNDVLCAPSF 696
Query: 438 TVNLLSVHKLARDNKLFIGFDEHKCYIQDLQHQKTLAIGSQRQSLYFLDFTGTNNFIKSN 617
+DL +K + +G + LY+L N K +
Sbjct: 697 ---------------------------KDLVTKKIIGLGREHNGLYYLT---PNLATKPS 726
Query: 618 NIISCH----SNSLWHNRLGHLSDQVLKALKHKIDFKGDFNSSPCDIWHYSKQTREPLPL 785
+I S + S +LWH RLGH S L+ L I CD+ +KQTR L
Sbjct: 727 HISSANHAVMSTTLWHRRLGHPSPNRLQLLAKTIPGVSCSADKVCDVCPLAKQTRLSFNL 786
Query: 786 SDHKSTSVGELIHLDVWGPYKVTSREGFKYFLTMVDDYSR-VWVYFLKTKNEVADNIIEF 962
S +T LIH D+WGP+K+ S G +YFLT+VDD+SR W+Y + K+E + + F
Sbjct: 787 STISTTKPFALIHCDIWGPHKIASHSGARYFLTIVDDFSRCTWLYLMHAKSETQNLLKSF 846
Query: 963 HNYLKNKFNKAVKIFRSDD-TEFVNNYLHTYFKLHGIIHQTTIAYTHQQNGIA*RNNIHL 1139
+ + +FN+ V+ RSD+ +EF++ + ++F+ +GIIHQ + YT QQNG+ R + H+
Sbjct: 847 FAFTETQFNQKVQHIRSDNGSEFLS--MRSFFQANGIIHQHSCVYTPQQNGVVERKHRHI 904
Query: 1140 LNVARSLLFQAGTPLNMWTQCILTATYLINRLPSFVLKGKYPFELVFGNELNISHLRSFG 1319
+ +AR+LLFQA PL W +C+LT YLINRLP+ +L GK PFE +F SH+R FG
Sbjct: 905 ITIARALLFQANLPLEFWAECVLTVVYLINRLPAPLLSGKSPFEKIFQRVPQYSHIRVFG 964
Query: 1320 CLCFATILIDKHKFSSKSENAFLLGTLTQKKVINYLACKIKIFYTQGMSSFMK-IFSFKN 1496
CL +AT + K KF ++ +G +K K F+T F + IF +K
Sbjct: 965 CLAYATNVHPKQKFDPRAHKCIFVGYPFGQKAYKLYDLTTKKFFTSRDVVFHEDIFPYKQ 1024
Query: 1497 ERKFKKLSQILHLKQITSTFFDSHYVRRSPNLLPNDESDAHNDQGSDDESPHVDGTKSSS 1676
+ S L L+ + PN++P ++ + P S
Sbjct: 1025 D------SPNLSLQPHDAVL---------PNVIPENDIP---------QEPLSASRVSPI 1060
Query: 1677 DHT--SIDSKATHNV-DGTESLNNDSGATQDDLVITSLSDNNIVDSNSTSEGNDFNIPNV 1847
+HT +D+ + NV E+ ND +S + +D++S S + +PN
Sbjct: 1061 EHTLPQVDNSLSPNVLSDHETHPNDQTPPSP----SSHHSSPPLDNSSPSSPSSPPVPNE 1116
Query: 1848 VNEPITQRRSGRTSKLPTKLSDFVLDGKV------------------KYGIDRVVNYSKL 1973
P RRS R K KL D+V V +Y + ++Y +
Sbjct: 1117 DTVPAL-RRSERVRKPNVKLKDYVCSHVVLPTQEDSSSLWPFPNKGTRYPLSNYISYHRF 1175
Query: 1974 SKENYCLSINLNKYFEPNTFHEVCKYKEWIIAMNNEIKALNRNETWEITELTPGRKAIGS 2153
S + N+ + EPN+F E K +W AM +EI+AL N TW +T L PG++ IG
Sbjct: 1176 SSSHRSFIANITRSVEPNSFAEAIKNPQWQEAMTSEIQALEANNTWSLTPLPPGKEPIGC 1235
Query: 2154 KWIYKIKYMSNGDIERYKARLVANGYNQREGVDYDETFSLVVKIVTIRFLISLAVNNGWP 2333
KW+YKIKY S+G IERYKARLVA GY Q EGVDY ETFS K+ T R L+++A + W
Sbjct: 1236 KWVYKIKYNSDGTIERYKARLVAKGYTQVEGVDYCETFSPTAKLTTFRCLLAIAASRNWS 1295
Query: 2334 LFQLDVKNAFLYGNLTEGVYMTLPGDIS 2417
L Q+DV+NAFL+G+L E VYM P S
Sbjct: 1296 LHQMDVQNAFLHGDLHEEVYMLPPPGFS 1323
Score = 212 bits (539), Expect(3) = 0.0
Identities = 101/207 (48%), Positives = 143/207 (69%)
Frame = +1
Query: 2878 KNITGYQKLLRKLIYLTHTRPDISYVVHSLSRFLHSPLESYLKIGLRILRYLKQAPGKGI 3057
K+ T Y++L+ KLIYLT TRPDI Y V LS+F++ P + +++ +R+L ++K PG+GI
Sbjct: 1474 KDPTRYRRLIGKLIYLTVTRPDIVYSVRILSQFMNQPRKPHMEAAMRVLHFIKGNPGRGI 1533
Query: 3058 LISKGSNLNLYSYSDSDWAKCRSTRRSVTGFAIFLGNSLISWKRKKQNVASRSSAKAEYR 3237
++L L +Y DSDWA C +TR+S TG+++FLGNSLISWK KKQ+ + SSA+AEYR
Sbjct: 1534 FFPSENDLALKAYCDSDWASCPTTRKSTTGYSVFLGNSLISWKSKKQSNVACSSAEAEYR 1593
Query: 3238 ALASTTCEVIWLTSLLQDLNIKIGKPVTMYCDNKVAIQIASNPFFHDRTKHFEFDLHFIR 3417
A+A T E+ WL +LQD I KP ++YCDN+ A+ IA+NP FH+RTKH E D H +R
Sbjct: 1594 AMAMTCRELTWLRYILQDFEIIQDKPASLYCDNQAALHIAANPVFHERTKHIEIDCHVVR 1653
Query: 3418 DKITEGIRKPLKIESAKNTTDILTKGL 3498
+K+ G+ + S+ DI TK L
Sbjct: 1654 EKLQAGLISTRYVPSSLQIADIFTKYL 1680
Score = 139 bits (349), Expect(3) = 0.0
Identities = 68/145 (46%), Positives = 93/145 (64%)
Frame = +2
Query: 2402 PWGYFSVNDQRVCKLKKSLYGLKHAPRKWNEKLCQTLIKNGFK*SKSDYSLFVKTKNNHF 2581
P G+ + VC+L KSLYGLK A R W K + K G++ SK+DYSLF + N F
Sbjct: 1319 PPGFSRQGENLVCRLNKSLYGLKQASRNWFSKFSNAIQKAGYRQSKADYSLFTRVVGNSF 1378
Query: 2582 IGLLVYVDDIVVTRSNLEEVNKVKDFLETNFQIKDLGNLKYFLGIEVLENENGICLSQIK 2761
+L+YVDDIV+T ++ + + +K FL F+IKDLGNLKYFLGIEV ++ GI +SQ K
Sbjct: 1379 TAVLIYVDDIVITGNDPKAIELLKAFLHKEFRIKDLGNLKYFLGIEVSRSKKGIFISQRK 1438
Query: 2762 YCLELLTEYGLLACKPSQTPIESKL 2836
Y L++L + GL +P P+E L
Sbjct: 1439 YALDILLDAGLTGARPCHFPMEQNL 1463