BLASTX nr result

ID: Chrysanthemum21_contig00017323 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00017323
         (831 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10273.1| hypothetical protein Ccrd_011317 [Cynara carduncu...    51   1e-08
ref|XP_023736827.1| uncharacterized protein LOC111884748 isoform...    51   4e-07
ref|XP_023736829.1| uncharacterized protein LOC111884748 isoform...    51   4e-07

>gb|KVI10273.1| hypothetical protein Ccrd_011317 [Cynara cardunculus var. scolymus]
          Length = 1181

 Score = 50.8 bits (120), Expect(2) = 1e-08
 Identities = 41/114 (35%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
 Frame = -3

Query: 829  SVSSQIVASSYQESTLLRKN-AIESFNFKPQMFSDGRSSLXXXXXXXXPVAENVAYP--- 662
            +VSS  VAS YQ+S+ LRK  +IE       +     S             + + +P   
Sbjct: 883  TVSSYSVASHYQDSSSLRKQQSIEPSRSPNGLNFRSESMFLLNNYPNSQPPDTMVFPTIT 942

Query: 661  -------------------HTSTSPSKPVLRLMGKNLTVVKTDEDL--PSPQQF 563
                                ++ SPSKPVLRLMGKNLTVVKTD+D+   S QQF
Sbjct: 943  KKLSSAAGLPVKLPIYSDCDSAVSPSKPVLRLMGKNLTVVKTDDDVSSSSSQQF 996



 Score = 37.7 bits (86), Expect(2) = 1e-08
 Identities = 44/139 (31%), Positives = 58/139 (41%), Gaps = 41/139 (29%)
 Frame = -2

Query: 515  YQNGY-------QPPNNMTSHAFETMFRSTSYADNGSPHVGPMVSEARTM---------- 387
            YQNG        QPP NM S      F +  Y  +  P++GPMV  AR+           
Sbjct: 1022 YQNGSESNHFNGQPPVNMRS------FMADRYC-HAVPNMGPMVPPARSYNGYNGVHSQT 1074

Query: 386  ------------PSKPMKDIIIIDDSPA----DETRN---WTSSQYSAHNHNH--NHMPF 270
                         S P+K+IIIIDDSP     D TRN      +Q+   N +   ++ P+
Sbjct: 1075 PRGRNLYNAAASSSNPIKEIIIIDDSPENEADDSTRNDQFLRRNQFYTMNQSQGSDYHPY 1134

Query: 269  G---YESQNGGFQGYSPFM 222
            G      + GGFQ  S  M
Sbjct: 1135 GGGPAVFRAGGFQTSSGMM 1153


>ref|XP_023736827.1| uncharacterized protein LOC111884748 isoform X1 [Lactuca sativa]
 ref|XP_023736828.1| uncharacterized protein LOC111884748 isoform X1 [Lactuca sativa]
          Length = 1074

 Score = 51.2 bits (121), Expect(2) = 4e-07
 Identities = 27/35 (77%), Positives = 28/35 (80%), Gaps = 3/35 (8%)
 Frame = -3

Query: 649 SPSKPVLRLMGKNLTVVKTDEDL---PSPQQFGAP 554
           SPSKPVLRLMGKNLTVVKTDED+   PS Q F  P
Sbjct: 870 SPSKPVLRLMGKNLTVVKTDEDVLPSPSSQPFRPP 904



 Score = 32.0 bits (71), Expect(2) = 4e-07
 Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
 Frame = -2

Query: 515  YQNGYQPPN-NMTSHAFETMFRSTSYADNGSP-----HVGPM-VSEARTMPSKPMKDIII 357
            +QNG +    N+  H      RST++    +P     H G   V  AR+  +   K+II+
Sbjct: 921  FQNGSESQRFNVYPHPQVNNMRSTTHGGFMAPVDRYGHGGHYAVPHARSHHNYNSKEIIV 980

Query: 356  IDDSPADETRNWTSSQYSAHNHNHNHMPFG----------YESQNGGFQGYSPFMKVEDT 207
            IDD P +E  +   ++    NH   +  +           Y S  GG  G + F      
Sbjct: 981  IDDLPENELDDCMRNEILRRNHGQMNPLYSMYQAQSSSHLYSSGGGGGGGSTVFRGGSFN 1040

Query: 206  RTHDKWN 186
                KWN
Sbjct: 1041 GDLGKWN 1047


>ref|XP_023736829.1| uncharacterized protein LOC111884748 isoform X2 [Lactuca sativa]
 gb|PLY71470.1| hypothetical protein LSAT_7X115701 [Lactuca sativa]
          Length = 1068

 Score = 51.2 bits (121), Expect(2) = 4e-07
 Identities = 27/35 (77%), Positives = 28/35 (80%), Gaps = 3/35 (8%)
 Frame = -3

Query: 649 SPSKPVLRLMGKNLTVVKTDEDL---PSPQQFGAP 554
           SPSKPVLRLMGKNLTVVKTDED+   PS Q F  P
Sbjct: 864 SPSKPVLRLMGKNLTVVKTDEDVLPSPSSQPFRPP 898



 Score = 32.0 bits (71), Expect(2) = 4e-07
 Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
 Frame = -2

Query: 515  YQNGYQPPN-NMTSHAFETMFRSTSYADNGSP-----HVGPM-VSEARTMPSKPMKDIII 357
            +QNG +    N+  H      RST++    +P     H G   V  AR+  +   K+II+
Sbjct: 915  FQNGSESQRFNVYPHPQVNNMRSTTHGGFMAPVDRYGHGGHYAVPHARSHHNYNSKEIIV 974

Query: 356  IDDSPADETRNWTSSQYSAHNHNHNHMPFG----------YESQNGGFQGYSPFMKVEDT 207
            IDD P +E  +   ++    NH   +  +           Y S  GG  G + F      
Sbjct: 975  IDDLPENELDDCMRNEILRRNHGQMNPLYSMYQAQSSSHLYSSGGGGGGGSTVFRGGSFN 1034

Query: 206  RTHDKWN 186
                KWN
Sbjct: 1035 GDLGKWN 1041


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