BLASTX nr result

ID: Chrysanthemum21_contig00017234 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00017234
         (575 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021983782.1| lysine-specific histone demethylase 1 homolo...    57   5e-06

>ref|XP_021983782.1| lysine-specific histone demethylase 1 homolog 3-like isoform X2
           [Helianthus annuus]
          Length = 1691

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 41/99 (41%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
 Frame = -3

Query: 327 DGNKSGSNKVLFGGNKELGLGFDVKM-------------DLGKKKRCGDVKIELD-DDDE 190
           DG+  GSNK   G +KE+GLGFDVK              +LGKKKR  +VK  ++ DDDE
Sbjct: 4   DGDDCGSNK---GVDKEIGLGFDVKCGVGEIRVEKMGVEELGKKKRSAEVKDGVESDDDE 60

Query: 189 PIGSLFXXXXXXXXXXXXXXXXXXXXXXVGMDDTLAVFR 73
           PIGS+F                       G+DDTLA FR
Sbjct: 61  PIGSMF-----KVVKSRKNAKKVKVEFDGGLDDTLAAFR 94


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