BLASTX nr result

ID: Chrysanthemum21_contig00017200 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00017200
         (530 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023772221.1| lysine-rich arabinogalactan protein 19-like ...    65   4e-10

>ref|XP_023772221.1| lysine-rich arabinogalactan protein 19-like [Lactuca sativa]
          Length = 167

 Score = 65.5 bits (158), Expect = 4e-10
 Identities = 53/166 (31%), Positives = 73/166 (43%), Gaps = 14/166 (8%)
 Frame = -3

Query: 528 RFPFATTCGPITPSVMSKVVSYPQSEPCIANDHLRNYDLSFLSANTSNAAAAPLTPIIST 349
           RF  AT     T S  S VVS+PQSEP I NDHL  YDLS L A++S+A AAP T   +T
Sbjct: 6   RFLNATPVTDTTMSSQSVVVSFPQSEPSIVNDHLSKYDLSLLLASSSHAVAAP-TGTTNT 64

Query: 348 QRPITTTSTGDNMSSSTPFVLEQQEHQSTVPTSARTPTSDTDVTIT-----SGDVXXXXX 184
           +    T ++G ++S   P      +  S   T+   P +  D++ T     +G       
Sbjct: 65  E----TVTSGPSLSHVGPIFSPYVDLSSNTTTTPPEPPNSPDISPTDPPAAAGSTNPPVQ 120

Query: 183 XXXXXXXXXXXXXXSI---------GVTTRARAGNTFPRNFTDGTV 73
                         S          G+ T  R G + P+ FTD T+
Sbjct: 121 PTTEPGSPVSPVTSSTVAPEITSPPGIMTHGRVGKSCPQRFTDVTI 166


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