BLASTX nr result

ID: Chrysanthemum21_contig00016796 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00016796
         (527 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI07248.1| Basic-leucine zipper domain-containing protein [C...    55   7e-06

>gb|KVI07248.1| Basic-leucine zipper domain-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 301

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 48/97 (49%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
 Frame = -1

Query: 269 SCKQEEPDFNDSMMTLEDFLAMSANEPQEQDVKXXXXXXPTDTLLSGSGRMLSFDNPSPD 90
           SCKQE PD    MMTLEDFLA  A   +E+DVK      P++ L   SG + SFDNP   
Sbjct: 114 SCKQEVPD---EMMTLEDFLA-KAGAVEEEDVKIPPPPLPSERL---SGGIFSFDNPIHP 166

Query: 89  LNVN--------VDNITARGGKRRPILADPLQDKAAQ 3
            NV+        VD +  R GKRR IL +PL DKAAQ
Sbjct: 167 PNVDGVVGFGIGVDEMGGR-GKRRAIL-EPL-DKAAQ 200


Top