BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00016663
         (1508 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023755914.1| probable RNA-dependent RNA polymerase 1 [Lac...   761   0.0  
gb|OTG18548.1| putative RNA-dependent RNA polymerase, eukaryotic...   751   0.0  
ref|XP_021977450.1| probable RNA-dependent RNA polymerase 1 [Hel...   751   0.0  
gb|KVG42498.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...   741   0.0  
ref|XP_021977396.1| probable RNA-dependent RNA polymerase 1 [Hel...   743   0.0  
gb|OTG18488.1| putative RNA-dependent RNA polymerase 1 [Helianth...   743   0.0  
gb|KVI02971.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...   736   0.0  
gb|KVG80506.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...   734   0.0  
gb|PLY72463.1| hypothetical protein LSAT_2X70281 [Lactuca sativa]     727   0.0  
ref|XP_023735459.1| LOW QUALITY PROTEIN: probable RNA-dependent ...   727   0.0  
ref|XP_021977395.1| probable RNA-dependent RNA polymerase 1 [Hel...   726   0.0  
gb|OTG18486.1| putative RNA-dependent RNA polymerase, eukaryotic...   726   0.0  
gb|POE68701.1| rna-dependent rna polymerase 1 [Quercus suber]         666   0.0  
ref|XP_023929293.1| RNA-dependent RNA polymerase 1-like [Quercus...   664   0.0  
gb|POE89560.1| rna-dependent rna polymerase 1 [Quercus suber]         664   0.0  
ref|XP_023927460.1| RNA-dependent RNA polymerase 1-like [Quercus...   667   0.0  
ref|XP_023886197.1| LOW QUALITY PROTEIN: probable RNA-dependent ...   666   0.0  
gb|ABO93004.1| putative RNA-dependent RNA-polymerase, partial [S...   645   0.0  
ref|XP_024194702.1| RNA-dependent RNA polymerase 1 [Rosa chinens...   649   0.0  
gb|KDO60788.1| hypothetical protein CISIN_1g0025862mg, partial [...   630   0.0  

>ref|XP_023755914.1| probable RNA-dependent RNA polymerase 1 [Lactuca sativa]
 ref|XP_023755915.1| probable RNA-dependent RNA polymerase 1 [Lactuca sativa]
 gb|PLY91365.1| hypothetical protein LSAT_8X35321 [Lactuca sativa]
          Length = 1119

 Score =  761 bits (1966), Expect = 0.0
 Identities = 381/457 (83%), Positives = 420/457 (91%), Gaps = 4/457 (0%)
 Frame = -3

Query: 1362 RKNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVS 1183
            + N+RLR+PAISLD  +GLVYVRRVQITPSKVYFCGPE+NVSNRVLRHY+DYIDNF+RVS
Sbjct: 334  KNNNRLRSPAISLD--SGLVYVRRVQITPSKVYFCGPEVNVSNRVLRHYADYIDNFIRVS 391

Query: 1182 FVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRD 1003
            F+DEELEKLYSTDLSPRA +    +KT IYTRIL +LK+GIVIG KKFEFLAFSSSQLRD
Sbjct: 392  FLDEELEKLYSTDLSPRANNLTGVNKTAIYTRILSVLKNGIVIGNKKFEFLAFSSSQLRD 451

Query: 1002 NSAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPD 823
            NSAWMFA+TGR+NAA IREWMGDFS IKNVAKYAARLGQSFGSSKESLSVA++EV KI D
Sbjct: 452  NSAWMFASTGRINAADIREWMGDFSSIKNVAKYAARLGQSFGSSKESLSVAQHEVAKIAD 511

Query: 822  VEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMK 643
            VE++RNG +Y+FSDGIGKISA FA+RVSKKCGY FIPSAFQIRY GYKGVVAVDPTS MK
Sbjct: 512  VEVIRNGVRYIFSDGIGKISAEFAKRVSKKCGYDFIPSAFQIRYGGYKGVVAVDPTSTMK 571

Query: 642  LSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLD 463
            LSLR SM KF+SDNTKLD+LAISKYQPCYMNRQLITLLSTLGV+D+VFE+KQKE VDLLD
Sbjct: 572  LSLRNSMCKFESDNTKLDVLAISKYQPCYMNRQLITLLSTLGVKDHVFEKKQKEVVDLLD 631

Query: 462  AILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKT 283
            A+L+EP+KAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRA KLLE+RTKT
Sbjct: 632  AVLREPMKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRATKLLELRTKT 691

Query: 282  RIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHS----GMMSNELKTVRGKV 115
            RIFV KGR+MMGCLDETRTLEYGEVFV +SGAG+RPL+D+ S    G+   + K V GKV
Sbjct: 692  RIFVSKGRAMMGCLDETRTLEYGEVFVHFSGAGRRPLNDNGSSSSGGVGGYKSKIVVGKV 751

Query: 114  VVAKNPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            VVAKNPCLHPGDVRVLKAV+VP+LHHMVDCVVFPQKG
Sbjct: 752  VVAKNPCLHPGDVRVLKAVNVPSLHHMVDCVVFPQKG 788



 Score = 66.2 bits (160), Expect = 1e-07
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -1

Query: 1508 LVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLY 1389
            LVQHGCIPGP+L++ FYELLDPQR  RD+ SIEYVLEKL+
Sbjct: 279  LVQHGCIPGPLLNATFYELLDPQR--RDIGSIEYVLEKLF 316


>gb|OTG18548.1| putative RNA-dependent RNA polymerase, eukaryotic-type [Helianthus
            annuus]
          Length = 1030

 Score =  751 bits (1939), Expect = 0.0
 Identities = 373/453 (82%), Positives = 418/453 (92%)
 Frame = -3

Query: 1359 KNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSF 1180
            KN +L++PAISLD   GLVYVRRVQITPSKVYFCGPE+NVSNRVLRHY++YIDNFLRVSF
Sbjct: 254  KNKKLKSPAISLD--TGLVYVRRVQITPSKVYFCGPEVNVSNRVLRHYAEYIDNFLRVSF 311

Query: 1179 VDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRDN 1000
            +DEELEKLYSTDL+P+ + +N ES+T IY RIL IL++GI IGGKKFEFLAFSSSQLRDN
Sbjct: 312  LDEELEKLYSTDLAPK-VGRNGESRTAIYRRILSILRNGISIGGKKFEFLAFSSSQLRDN 370

Query: 999  SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPDV 820
            SAWMFA+TGR+NAA+IR WMGDFS IKNVAKYAARLGQSFGSSKESLSVA++EVE+IPDV
Sbjct: 371  SAWMFASTGRLNAAAIRNWMGDFSSIKNVAKYAARLGQSFGSSKESLSVAQHEVEEIPDV 430

Query: 819  EIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKL 640
            EIVR+GT+YVFSDGIGKISA FA+RVS KCGY  IPSAFQ+RY GYKGVVAVDPTS MKL
Sbjct: 431  EIVRSGTRYVFSDGIGKISAEFAKRVSSKCGYDIIPSAFQVRYGGYKGVVAVDPTSYMKL 490

Query: 639  SLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDA 460
            SLRKSM KF+S NTKLDILA+SKYQPCYMNRQLITLLSTLG+ D++FE+KQ+EAV LLDA
Sbjct: 491  SLRKSMCKFESTNTKLDILAVSKYQPCYMNRQLITLLSTLGIPDHIFEKKQREAVCLLDA 550

Query: 459  ILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTR 280
            IL EP+KA+EAL+LMSPGENTN+MK MLSCGYKPNAEPFLSMMLQVFRA KLLE+RTKTR
Sbjct: 551  ILVEPIKAEEALDLMSPGENTNVMKGMLSCGYKPNAEPFLSMMLQVFRATKLLELRTKTR 610

Query: 279  IFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAKN 100
            +FVP GRSMMGCLDETRTLEYGEVFV YS AG+RPL D++SG+ S + + VRG VVVAKN
Sbjct: 611  VFVPNGRSMMGCLDETRTLEYGEVFVHYSSAGRRPLGDEYSGIGSCKSRIVRGNVVVAKN 670

Query: 99   PCLHPGDVRVLKAVDVPALHHMVDCVVFPQKGQ 1
            PCLHPGDVRVLKAV+VPALHHMVDCVVFPQKG+
Sbjct: 671  PCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGK 703



 Score = 66.6 bits (161), Expect = 9e-08
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -1

Query: 1508 LVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLY 1389
            LVQHGCIPGPVLD+ FY LLDPQR  RD+ +IEYV+EKLY
Sbjct: 198  LVQHGCIPGPVLDANFYALLDPQR--RDIEAIEYVMEKLY 235


>ref|XP_021977450.1| probable RNA-dependent RNA polymerase 1 [Helianthus annuus]
          Length = 1113

 Score =  751 bits (1939), Expect = 0.0
 Identities = 373/453 (82%), Positives = 418/453 (92%)
 Frame = -3

Query: 1359 KNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSF 1180
            KN +L++PAISLD   GLVYVRRVQITPSKVYFCGPE+NVSNRVLRHY++YIDNFLRVSF
Sbjct: 337  KNKKLKSPAISLD--TGLVYVRRVQITPSKVYFCGPEVNVSNRVLRHYAEYIDNFLRVSF 394

Query: 1179 VDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRDN 1000
            +DEELEKLYSTDL+P+ + +N ES+T IY RIL IL++GI IGGKKFEFLAFSSSQLRDN
Sbjct: 395  LDEELEKLYSTDLAPK-VGRNGESRTAIYRRILSILRNGISIGGKKFEFLAFSSSQLRDN 453

Query: 999  SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPDV 820
            SAWMFA+TGR+NAA+IR WMGDFS IKNVAKYAARLGQSFGSSKESLSVA++EVE+IPDV
Sbjct: 454  SAWMFASTGRLNAAAIRNWMGDFSSIKNVAKYAARLGQSFGSSKESLSVAQHEVEEIPDV 513

Query: 819  EIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKL 640
            EIVR+GT+YVFSDGIGKISA FA+RVS KCGY  IPSAFQ+RY GYKGVVAVDPTS MKL
Sbjct: 514  EIVRSGTRYVFSDGIGKISAEFAKRVSSKCGYDIIPSAFQVRYGGYKGVVAVDPTSYMKL 573

Query: 639  SLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDA 460
            SLRKSM KF+S NTKLDILA+SKYQPCYMNRQLITLLSTLG+ D++FE+KQ+EAV LLDA
Sbjct: 574  SLRKSMCKFESTNTKLDILAVSKYQPCYMNRQLITLLSTLGIPDHIFEKKQREAVCLLDA 633

Query: 459  ILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTR 280
            IL EP+KA+EAL+LMSPGENTN+MK MLSCGYKPNAEPFLSMMLQVFRA KLLE+RTKTR
Sbjct: 634  ILVEPIKAEEALDLMSPGENTNVMKGMLSCGYKPNAEPFLSMMLQVFRATKLLELRTKTR 693

Query: 279  IFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAKN 100
            +FVP GRSMMGCLDETRTLEYGEVFV YS AG+RPL D++SG+ S + + VRG VVVAKN
Sbjct: 694  VFVPNGRSMMGCLDETRTLEYGEVFVHYSSAGRRPLGDEYSGIGSCKSRIVRGNVVVAKN 753

Query: 99   PCLHPGDVRVLKAVDVPALHHMVDCVVFPQKGQ 1
            PCLHPGDVRVLKAV+VPALHHMVDCVVFPQKG+
Sbjct: 754  PCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGK 786



 Score = 66.6 bits (161), Expect = 9e-08
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -1

Query: 1508 LVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLY 1389
            LVQHGCIPGPVLD+ FY LLDPQR  RD+ +IEYV+EKLY
Sbjct: 281  LVQHGCIPGPVLDANFYALLDPQR--RDIEAIEYVMEKLY 318


>gb|KVG42498.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
            var. scolymus]
          Length = 994

 Score =  741 bits (1913), Expect = 0.0
 Identities = 371/453 (81%), Positives = 407/453 (89%)
 Frame = -3

Query: 1362 RKNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVS 1183
            R+N+RLR P ISLD  AGLVYVRRVQITPSKVYFCGPE+NVSNRVLR+++ YID+FLRVS
Sbjct: 237  RRNNRLRTPTISLD--AGLVYVRRVQITPSKVYFCGPEVNVSNRVLRNFATYIDDFLRVS 294

Query: 1182 FVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRD 1003
            F+DEELEKLYSTDL+PRA +++ ES+TGIY RIL IL+DGIVIG KKFEFLAFSSSQLRD
Sbjct: 295  FLDEELEKLYSTDLAPRATNRSEESRTGIYKRILSILRDGIVIGRKKFEFLAFSSSQLRD 354

Query: 1002 NSAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPD 823
            NSAWMFA++  + AA IREWMG F+ IKNVAKYAARLGQSFGSSKESL VA YEVEKIPD
Sbjct: 355  NSAWMFASSNXLTAADIREWMGKFNSIKNVAKYAARLGQSFGSSKESLXVAPYEVEKIPD 414

Query: 822  VEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMK 643
            +E+VR GTKYVFSDGIGKIS  FA  VS KCGY FIPSAFQIRY GYKGVVA+DPTS  K
Sbjct: 415  IEVVRGGTKYVFSDGIGKISXEFASXVSJKCGYDFIPSAFQIRYGGYKGVVAIDPTSSKK 474

Query: 642  LSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLD 463
            LSLR SM KFDSDNTKLD+LAISKYQPCYMNRQ+ITLLSTLGVRD+VFE+KQKEAVDLLD
Sbjct: 475  LSLRTSMCKFDSDNTKLDVLAISKYQPCYMNRQIITLLSTLGVRDHVFEKKQKEAVDLLD 534

Query: 462  AILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKT 283
            AIL+EP+KA+EALELMSPGENTNI+KEML+CGYKPNAEPFLSMMLQVFRA KLLE+RTKT
Sbjct: 535  AILREPMKAEEALELMSPGENTNILKEMLACGYKPNAEPFLSMMLQVFRATKLLELRTKT 594

Query: 282  RIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAK 103
            R FVP+GR MMGCLDETRTLEYGEVFVQ+SG+ +R L DD SG  SN  + V GKVVVAK
Sbjct: 595  RXFVPRGRXMMGCLDETRTLEYGEVFVQFSGSRRRVLGDDFSGGSSNSCRIVTGKVVVAK 654

Query: 102  NPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            NPCLHPGDVRVL AVDVP L HMVDCVVFPQKG
Sbjct: 655  NPCLHPGDVRVLTAVDVPRLRHMVDCVVFPQKG 687



 Score = 63.9 bits (154), Expect = 6e-07
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -1

Query: 1508 LVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKL 1392
            LVQHGCIPGPVLD+ F+ELLDP R  RD+ASI+YVL+KL
Sbjct: 182  LVQHGCIPGPVLDANFFELLDPAR--RDIASIDYVLDKL 218


>ref|XP_021977396.1| probable RNA-dependent RNA polymerase 1 [Helianthus annuus]
          Length = 1120

 Score =  743 bits (1918), Expect = 0.0
 Identities = 373/454 (82%), Positives = 411/454 (90%)
 Frame = -3

Query: 1362 RKNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVS 1183
            R N +LR+P ISLD   GLVYVRRVQITPSKVYF GPE+NVSNRVLRHY+DYIDNFLRVS
Sbjct: 338  RNNKKLRSPTISLD--TGLVYVRRVQITPSKVYFWGPEVNVSNRVLRHYADYIDNFLRVS 395

Query: 1182 FVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRD 1003
            FVDEELEKLYSTDLSPR + Q+  S+TGIY RIL IL++GIVIG KKFEFLAFSSSQLRD
Sbjct: 396  FVDEELEKLYSTDLSPR-VGQSGVSRTGIYRRILSILRNGIVIGNKKFEFLAFSSSQLRD 454

Query: 1002 NSAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPD 823
            NSAWMFA+TGRVNAA IR WMGDF  IKNVAKYAARLGQ FGSSKESLSVA YEVE+IPD
Sbjct: 455  NSAWMFASTGRVNAAEIRNWMGDFRSIKNVAKYAARLGQCFGSSKESLSVARYEVEEIPD 514

Query: 822  VEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMK 643
            ++IVRNGT YVFSDGIGKISA  A+RVS+KCGY FIPSAFQIRYAGYKGVVAVDPTS MK
Sbjct: 515  IKIVRNGTTYVFSDGIGKISAELAERVSRKCGYDFIPSAFQIRYAGYKGVVAVDPTSFMK 574

Query: 642  LSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLD 463
            LS R+SM KF+SDNTKLDILA+SKYQPCYMNRQ ITLLSTLG+ D++F+RKQ+EAV LLD
Sbjct: 575  LSSRESMFKFESDNTKLDILAVSKYQPCYMNRQFITLLSTLGISDHIFQRKQREAVCLLD 634

Query: 462  AILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKT 283
            AIL +P+KA+EAL+LMSPGENTN+MK MLSCGYKPN+EPFLSMMLQVFRA KLLE+RTKT
Sbjct: 635  AILVDPIKAEEALDLMSPGENTNVMKGMLSCGYKPNSEPFLSMMLQVFRATKLLELRTKT 694

Query: 282  RIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAK 103
            RIFVPKGR+MMGCLDETRTLEYG+VFVQYS AG+RPL D++SG+ S   + V G VVVAK
Sbjct: 695  RIFVPKGRAMMGCLDETRTLEYGQVFVQYSSAGRRPLGDEYSGIGSYRPRIVTGDVVVAK 754

Query: 102  NPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKGQ 1
            NPCLHPGDVRVLKAV VPALHHMVDCVVFPQKG+
Sbjct: 755  NPCLHPGDVRVLKAVIVPALHHMVDCVVFPQKGK 788



 Score = 65.1 bits (157), Expect = 3e-07
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -1

Query: 1508 LVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLY 1389
            LVQHGCIPGPVL+  FY LLDPQR  RD+ SIEYV+EKLY
Sbjct: 283  LVQHGCIPGPVLNDDFYALLDPQR--RDIESIEYVMEKLY 320


>gb|OTG18488.1| putative RNA-dependent RNA polymerase 1 [Helianthus annuus]
          Length = 1132

 Score =  743 bits (1918), Expect = 0.0
 Identities = 373/454 (82%), Positives = 411/454 (90%)
 Frame = -3

Query: 1362 RKNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVS 1183
            R N +LR+P ISLD   GLVYVRRVQITPSKVYF GPE+NVSNRVLRHY+DYIDNFLRVS
Sbjct: 350  RNNKKLRSPTISLD--TGLVYVRRVQITPSKVYFWGPEVNVSNRVLRHYADYIDNFLRVS 407

Query: 1182 FVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRD 1003
            FVDEELEKLYSTDLSPR + Q+  S+TGIY RIL IL++GIVIG KKFEFLAFSSSQLRD
Sbjct: 408  FVDEELEKLYSTDLSPR-VGQSGVSRTGIYRRILSILRNGIVIGNKKFEFLAFSSSQLRD 466

Query: 1002 NSAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPD 823
            NSAWMFA+TGRVNAA IR WMGDF  IKNVAKYAARLGQ FGSSKESLSVA YEVE+IPD
Sbjct: 467  NSAWMFASTGRVNAAEIRNWMGDFRSIKNVAKYAARLGQCFGSSKESLSVARYEVEEIPD 526

Query: 822  VEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMK 643
            ++IVRNGT YVFSDGIGKISA  A+RVS+KCGY FIPSAFQIRYAGYKGVVAVDPTS MK
Sbjct: 527  IKIVRNGTTYVFSDGIGKISAELAERVSRKCGYDFIPSAFQIRYAGYKGVVAVDPTSFMK 586

Query: 642  LSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLD 463
            LS R+SM KF+SDNTKLDILA+SKYQPCYMNRQ ITLLSTLG+ D++F+RKQ+EAV LLD
Sbjct: 587  LSSRESMFKFESDNTKLDILAVSKYQPCYMNRQFITLLSTLGISDHIFQRKQREAVCLLD 646

Query: 462  AILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKT 283
            AIL +P+KA+EAL+LMSPGENTN+MK MLSCGYKPN+EPFLSMMLQVFRA KLLE+RTKT
Sbjct: 647  AILVDPIKAEEALDLMSPGENTNVMKGMLSCGYKPNSEPFLSMMLQVFRATKLLELRTKT 706

Query: 282  RIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAK 103
            RIFVPKGR+MMGCLDETRTLEYG+VFVQYS AG+RPL D++SG+ S   + V G VVVAK
Sbjct: 707  RIFVPKGRAMMGCLDETRTLEYGQVFVQYSSAGRRPLGDEYSGIGSYRPRIVTGDVVVAK 766

Query: 102  NPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKGQ 1
            NPCLHPGDVRVLKAV VPALHHMVDCVVFPQKG+
Sbjct: 767  NPCLHPGDVRVLKAVIVPALHHMVDCVVFPQKGK 800



 Score = 65.1 bits (157), Expect = 3e-07
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -1

Query: 1508 LVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLY 1389
            LVQHGCIPGPVL+  FY LLDPQR  RD+ SIEYV+EKLY
Sbjct: 295  LVQHGCIPGPVLNDDFYALLDPQR--RDIESIEYVMEKLY 332


>gb|KVI02971.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
            var. scolymus]
          Length = 1167

 Score =  736 bits (1901), Expect = 0.0
 Identities = 370/453 (81%), Positives = 406/453 (89%)
 Frame = -3

Query: 1362 RKNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVS 1183
            R+N+RLR P ISLD  AGLVYVRRVQITPSKVYFCGPE+NVSNRVLR+++ YID+FLRVS
Sbjct: 387  RRNNRLRTPTISLD--AGLVYVRRVQITPSKVYFCGPEVNVSNRVLRNFATYIDDFLRVS 444

Query: 1182 FVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRD 1003
            F+DEELEKLYSTDL PRA +++ ES+TGIY RIL IL+DGIVIG KKFEFLAFSSSQLRD
Sbjct: 445  FLDEELEKLYSTDLVPRATNRSEESRTGIYKRILSILRDGIVIGCKKFEFLAFSSSQLRD 504

Query: 1002 NSAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPD 823
            NS WMFA++  + AA IREWMG F+ IKNVAKYAARLGQSFGSSKESLSVA YEVEKIPD
Sbjct: 505  NSTWMFASSNTLTAADIREWMGKFNSIKNVAKYAARLGQSFGSSKESLSVAPYEVEKIPD 564

Query: 822  VEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMK 643
            +E+VR GTKYVFSDGIGKIS  FA RVS KCGY FIPSAFQIRY GYKGVVA+DPTS  K
Sbjct: 565  IEVVRGGTKYVFSDGIGKISXEFASRVSJKCGYDFIPSAFQIRYGGYKGVVAIDPTSSKK 624

Query: 642  LSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLD 463
            LSLR SM KFDSDNTKLD+LAISKYQPCYMNRQ+ITLLSTLGVRD+VFE+KQKEAVDLL+
Sbjct: 625  LSLRTSMCKFDSDNTKLDVLAISKYQPCYMNRQIITLLSTLGVRDHVFEKKQKEAVDLLN 684

Query: 462  AILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKT 283
            AIL EP+KA+EALELMSPGENTNI+KEML+CGYKPNAEPFLSMMLQVFRA KLLE+RTK 
Sbjct: 685  AILXEPMKAEEALELMSPGENTNILKEMLACGYKPNAEPFLSMMLQVFRATKLLELRTKA 744

Query: 282  RIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAK 103
            RIFVP+GRSMMGCLDETRTL YGEVFVQ+S + +R L DD SG  SN  + V GKVVVAK
Sbjct: 745  RIFVPRGRSMMGCLDETRTLAYGEVFVQFSCSRRRVLGDDFSGGSSNSCRIVTGKVVVAK 804

Query: 102  NPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            NPCLHPGDVRVL+AVDVP L HMVDCVVFPQKG
Sbjct: 805  NPCLHPGDVRVLRAVDVPQLRHMVDCVVFPQKG 837



 Score = 63.9 bits (154), Expect = 6e-07
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -1

Query: 1508 LVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKL 1392
            LVQHGCIPGPVLD+ F+ELLDP R  RD+ASI+YVL+KL
Sbjct: 332  LVQHGCIPGPVLDANFFELLDPAR--RDIASIDYVLDKL 368


>gb|KVG80506.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
            var. scolymus]
          Length = 1137

 Score =  734 bits (1894), Expect = 0.0
 Identities = 369/453 (81%), Positives = 404/453 (89%)
 Frame = -3

Query: 1362 RKNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVS 1183
            R+N+RLR   ISLD  AGLVYVRRVQITPSKVYFCGPE+NVSNRVLR++  YID+FLRVS
Sbjct: 370  RRNNRLRXXTISLD--AGLVYVRRVQITPSKVYFCGPEVNVSNRVLRNFXTYIDDFLRVS 427

Query: 1182 FVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRD 1003
            F+DEELEKLYSTDL PRA +++ ES+TGIY RIL IL+DGIVIG KKFEFLAFSSSQLRD
Sbjct: 428  FLDEELEKLYSTDLXPRATNRSEESRTGIYKRILSILRDGIVIGRKKFEFLAFSSSQLRD 487

Query: 1002 NSAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPD 823
            NSAWMFA++  + AA IREWMG F+ IKNVAKYAARLGQSFGSSKESL+VA YEVEKIPD
Sbjct: 488  NSAWMFASSNILTAADIREWMGKFNSIKNVAKYAARLGQSFGSSKESLNVAPYEVEKIPD 547

Query: 822  VEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMK 643
            +E+VR GTKYVFSDGIGKIS  FA  VS KCGY FIPSAFQIRY GYKGVVA+DPTS  K
Sbjct: 548  IEVVRGGTKYVFSDGIGKISLEFASSVSIKCGYDFIPSAFQIRYGGYKGVVAIDPTSSKK 607

Query: 642  LSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLD 463
            LSLR SM KFDSDNTKLD+LAISKYQPCYMNRQ+ITLLSTLGVRD+VFE+KQKEAVDLL+
Sbjct: 608  LSLRTSMCKFDSDNTKLDVLAISKYQPCYMNRQJITLLSTLGVRDHVFEKKQKEAVDLLN 667

Query: 462  AILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKT 283
            AIL EP+KA+EALELMSPGENTNI+KEML+CGYKPNAEPFLSMMLQVFRA KLLE+RTKT
Sbjct: 668  AILSEPMKAEEALELMSPGENTNILKEMLACGYKPNAEPFLSMMLQVFRATKLLELRTKT 727

Query: 282  RIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAK 103
            R FVP+GR MMGCLDETRTLEYGEVFVQ+SG+ +R L DD SG  SN  + V GKVVVAK
Sbjct: 728  RXFVPRGRXMMGCLDETRTLEYGEVFVQFSGSRRRVLGDDFSGGSSNSCRIVTGKVVVAK 787

Query: 102  NPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            NPCLHPGDVRVL AVDVP L HMVDCVVFPQKG
Sbjct: 788  NPCLHPGDVRVLTAVDVPRLRHMVDCVVFPQKG 820



 Score = 60.8 bits (146), Expect = 6e-06
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -1

Query: 1508 LVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKL 1392
            LVQHGCIPGPVLD+ F+ELLDP R  RD+ASI+ VL+KL
Sbjct: 315  LVQHGCIPGPVLDANFFELLDPAR--RDIASIDXVLDKL 351


>gb|PLY72463.1| hypothetical protein LSAT_2X70281 [Lactuca sativa]
          Length = 991

 Score =  727 bits (1877), Expect = 0.0
 Identities = 366/455 (80%), Positives = 407/455 (89%), Gaps = 2/455 (0%)
 Frame = -3

Query: 1362 RKNSRLRA-PAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRV 1186
            + N+R+R+ PAISLD D  LVYVRR+QITPSKVYFCGPE+NVSNRVLRH++ YIDNF+RV
Sbjct: 259  KNNNRIRSSPAISLDSD--LVYVRRIQITPSKVYFCGPEVNVSNRVLRHFAQYIDNFIRV 316

Query: 1185 SFVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLR 1006
            SF+DEELEKLYSTDLSPRA +   +++TGIY RIL +LK+GIVIG KKFEFLAFSSSQLR
Sbjct: 317  SFLDEELEKLYSTDLSPRANNIFGKTRTGIYKRILSVLKNGIVIGNKKFEFLAFSSSQLR 376

Query: 1005 DNSAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIP 826
            DNS WMFA+ GR+ AA IREWMGDFS IKNVAKYAARLGQS GSSKESLSVA +EV KIP
Sbjct: 377  DNSVWMFASNGRLKAADIREWMGDFSSIKNVAKYAARLGQSLGSSKESLSVAHHEVLKIP 436

Query: 825  DVEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDM 646
            DV ++RNG KY+FSDGIGKISA FA+RVS KCGY FIPSAFQIRY GYKGVVAVDPTS +
Sbjct: 437  DVGVIRNGVKYIFSDGIGKISAEFAKRVSIKCGYDFIPSAFQIRYGGYKGVVAVDPTSSI 496

Query: 645  KLSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLL 466
            KLSLR SM KF+S NTKLDILAISKYQPCYMNRQLITLLSTLGV+D+VFE+KQKE VDLL
Sbjct: 497  KLSLRNSMCKFESQNTKLDILAISKYQPCYMNRQLITLLSTLGVKDHVFEKKQKEVVDLL 556

Query: 465  DAILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTK 286
            DA+L+EP+KAQEALELMSP ENTNIMKEMLSCGYKPNAEPFLSMMLQVFRA KLLE+RTK
Sbjct: 557  DAVLREPMKAQEALELMSPSENTNIMKEMLSCGYKPNAEPFLSMMLQVFRATKLLELRTK 616

Query: 285  TRIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHS-GMMSNELKTVRGKVVV 109
            TRI+VPKGR+MMGCLDETRTLEYGEVFVQ+S AG+R +  D+      N+ + V GKVVV
Sbjct: 617  TRIYVPKGRTMMGCLDETRTLEYGEVFVQFSEAGRRTMHHDNDVNGGGNKCRVVVGKVVV 676

Query: 108  AKNPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            AKNPCLHPGDVRVL+AVDVP LHHMVDCVVFPQKG
Sbjct: 677  AKNPCLHPGDVRVLRAVDVPMLHHMVDCVVFPQKG 711



 Score = 67.4 bits (163), Expect = 5e-08
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -1

Query: 1508 LVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLY 1389
            LVQHGCIPGP+LDS F+ELLDPQRR   + SIEYVLEKLY
Sbjct: 204  LVQHGCIPGPLLDSSFFELLDPQRRH--IGSIEYVLEKLY 241


>ref|XP_023735459.1| LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase 1 [Lactuca
            sativa]
          Length = 1112

 Score =  727 bits (1877), Expect = 0.0
 Identities = 366/455 (80%), Positives = 407/455 (89%), Gaps = 2/455 (0%)
 Frame = -3

Query: 1362 RKNSRLRA-PAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRV 1186
            + N+R+R+ PAISLD D  LVYVRR+QITPSKVYFCGPE+NVSNRVLRH++ YIDNF+RV
Sbjct: 335  KNNNRIRSSPAISLDSD--LVYVRRIQITPSKVYFCGPEVNVSNRVLRHFAQYIDNFIRV 392

Query: 1185 SFVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLR 1006
            SF+DEELEKLYSTDLSPRA +   +++TGIY RIL +LK+GIVIG KKFEFLAFSSSQLR
Sbjct: 393  SFLDEELEKLYSTDLSPRANNIFGKTRTGIYKRILSVLKNGIVIGNKKFEFLAFSSSQLR 452

Query: 1005 DNSAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIP 826
            DNS WMFA+ GR+ AA IREWMGDFS IKNVAKYAARLGQS GSSKESLSVA +EV KIP
Sbjct: 453  DNSVWMFASNGRLKAADIREWMGDFSSIKNVAKYAARLGQSLGSSKESLSVAHHEVLKIP 512

Query: 825  DVEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDM 646
            DV ++RNG KY+FSDGIGKISA FA+RVS KCGY FIPSAFQIRY GYKGVVAVDPTS +
Sbjct: 513  DVGVIRNGVKYIFSDGIGKISAEFAKRVSIKCGYDFIPSAFQIRYGGYKGVVAVDPTSSI 572

Query: 645  KLSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLL 466
            KLSLR SM KF+S NTKLDILAISKYQPCYMNRQLITLLSTLGV+D+VFE+KQKE VDLL
Sbjct: 573  KLSLRNSMCKFESQNTKLDILAISKYQPCYMNRQLITLLSTLGVKDHVFEKKQKEVVDLL 632

Query: 465  DAILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTK 286
            DA+L+EP+KAQEALELMSP ENTNIMKEMLSCGYKPNAEPFLSMMLQVFRA KLLE+RTK
Sbjct: 633  DAVLREPMKAQEALELMSPSENTNIMKEMLSCGYKPNAEPFLSMMLQVFRATKLLELRTK 692

Query: 285  TRIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHS-GMMSNELKTVRGKVVV 109
            TRI+VPKGR+MMGCLDETRTLEYGEVFVQ+S AG+R +  D+      N+ + V GKVVV
Sbjct: 693  TRIYVPKGRTMMGCLDETRTLEYGEVFVQFSEAGRRTMHHDNDVNGGGNKCRVVVGKVVV 752

Query: 108  AKNPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            AKNPCLHPGDVRVL+AVDVP LHHMVDCVVFPQKG
Sbjct: 753  AKNPCLHPGDVRVLRAVDVPMLHHMVDCVVFPQKG 787



 Score = 67.4 bits (163), Expect = 5e-08
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -1

Query: 1508 LVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLY 1389
            LVQHGCIPGP+LDS F+ELLDPQRR   + SIEYVLEKLY
Sbjct: 280  LVQHGCIPGPLLDSSFFELLDPQRRH--IGSIEYVLEKLY 317


>ref|XP_021977395.1| probable RNA-dependent RNA polymerase 1 [Helianthus annuus]
          Length = 1118

 Score =  726 bits (1874), Expect = 0.0
 Identities = 362/453 (79%), Positives = 407/453 (89%)
 Frame = -3

Query: 1362 RKNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVS 1183
            + N +LR+PAISLDP  GLVYVRRVQITPSKVYF GPE+NVSNRVLRHY+DYIDNFLRVS
Sbjct: 336  QNNKKLRSPAISLDP--GLVYVRRVQITPSKVYFWGPEVNVSNRVLRHYADYIDNFLRVS 393

Query: 1182 FVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRD 1003
            FVDEELE +Y+T+LS + +  N E +TGIY RIL ILK+GIVIG KKFEFLA SSSQLRD
Sbjct: 394  FVDEELENVYATELSSK-VCVNGEKRTGIYRRILSILKNGIVIGDKKFEFLASSSSQLRD 452

Query: 1002 NSAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPD 823
            NSAWMFA+TG +NAA IR WMGDFS I+NVAKYAARLGQSFGSSKES  VA YEVE+IPD
Sbjct: 453  NSAWMFASTGSLNAAEIRNWMGDFSSIRNVAKYAARLGQSFGSSKESFCVARYEVEEIPD 512

Query: 822  VEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMK 643
            +E+VRNGTKYVFSDGIGKIS+  A+RVS+KCGY F+PSAFQIRYAGYKGVVAVDPTS +K
Sbjct: 513  IEVVRNGTKYVFSDGIGKISSELAERVSRKCGYNFVPSAFQIRYAGYKGVVAVDPTSFVK 572

Query: 642  LSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLD 463
            LSLRKSM KF+SDNTKLDIL ISKYQ CY+NRQ+ITLLSTLGV D+VFE+KQ++AV LLD
Sbjct: 573  LSLRKSMCKFESDNTKLDILLISKYQACYLNRQIITLLSTLGVSDHVFEKKQRDAVCLLD 632

Query: 462  AILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKT 283
            AIL +P+KA+EAL+LMSPGENTN++KEMLSCGYKPNAEPFLSMMLQVFRA KLLE+RTKT
Sbjct: 633  AILADPMKAEEALDLMSPGENTNVIKEMLSCGYKPNAEPFLSMMLQVFRATKLLELRTKT 692

Query: 282  RIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAK 103
            RIFVPKGR M+GCLDETRTLEYG+VFVQYS A + PL D++SG+ S + + V G VVVAK
Sbjct: 693  RIFVPKGRVMIGCLDETRTLEYGQVFVQYSSARRTPLGDEYSGLGSYKARIVSGDVVVAK 752

Query: 102  NPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            NPCLHPGDVRVL AVDVPALHHMVDCVVFPQKG
Sbjct: 753  NPCLHPGDVRVLSAVDVPALHHMVDCVVFPQKG 785


>gb|OTG18486.1| putative RNA-dependent RNA polymerase, eukaryotic-type [Helianthus
            annuus]
          Length = 1173

 Score =  726 bits (1874), Expect = 0.0
 Identities = 362/453 (79%), Positives = 407/453 (89%)
 Frame = -3

Query: 1362 RKNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVS 1183
            + N +LR+PAISLDP  GLVYVRRVQITPSKVYF GPE+NVSNRVLRHY+DYIDNFLRVS
Sbjct: 391  QNNKKLRSPAISLDP--GLVYVRRVQITPSKVYFWGPEVNVSNRVLRHYADYIDNFLRVS 448

Query: 1182 FVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRD 1003
            FVDEELE +Y+T+LS + +  N E +TGIY RIL ILK+GIVIG KKFEFLA SSSQLRD
Sbjct: 449  FVDEELENVYATELSSK-VCVNGEKRTGIYRRILSILKNGIVIGDKKFEFLASSSSQLRD 507

Query: 1002 NSAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPD 823
            NSAWMFA+TG +NAA IR WMGDFS I+NVAKYAARLGQSFGSSKES  VA YEVE+IPD
Sbjct: 508  NSAWMFASTGSLNAAEIRNWMGDFSSIRNVAKYAARLGQSFGSSKESFCVARYEVEEIPD 567

Query: 822  VEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMK 643
            +E+VRNGTKYVFSDGIGKIS+  A+RVS+KCGY F+PSAFQIRYAGYKGVVAVDPTS +K
Sbjct: 568  IEVVRNGTKYVFSDGIGKISSELAERVSRKCGYNFVPSAFQIRYAGYKGVVAVDPTSFVK 627

Query: 642  LSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLD 463
            LSLRKSM KF+SDNTKLDIL ISKYQ CY+NRQ+ITLLSTLGV D+VFE+KQ++AV LLD
Sbjct: 628  LSLRKSMCKFESDNTKLDILLISKYQACYLNRQIITLLSTLGVSDHVFEKKQRDAVCLLD 687

Query: 462  AILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKT 283
            AIL +P+KA+EAL+LMSPGENTN++KEMLSCGYKPNAEPFLSMMLQVFRA KLLE+RTKT
Sbjct: 688  AILADPMKAEEALDLMSPGENTNVIKEMLSCGYKPNAEPFLSMMLQVFRATKLLELRTKT 747

Query: 282  RIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAK 103
            RIFVPKGR M+GCLDETRTLEYG+VFVQYS A + PL D++SG+ S + + V G VVVAK
Sbjct: 748  RIFVPKGRVMIGCLDETRTLEYGQVFVQYSSARRTPLGDEYSGLGSYKARIVSGDVVVAK 807

Query: 102  NPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            NPCLHPGDVRVL AVDVPALHHMVDCVVFPQKG
Sbjct: 808  NPCLHPGDVRVLSAVDVPALHHMVDCVVFPQKG 840


>gb|POE68701.1| rna-dependent rna polymerase 1 [Quercus suber]
          Length = 913

 Score =  666 bits (1719), Expect = 0.0
 Identities = 337/451 (74%), Positives = 392/451 (86%), Gaps = 4/451 (0%)
 Frame = -3

Query: 1344 RAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDEEL 1165
            ++P ISLD  +GLVYVRRVQITPSKVYFCGPEINVSNRVLRH+ + IDNFLRVSFVDEE+
Sbjct: 8    KSPVISLD--SGLVYVRRVQITPSKVYFCGPEINVSNRVLRHFHEDIDNFLRVSFVDEEM 65

Query: 1164 EKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRDNSAWMF 985
            +KL STDLSPRA S N + +TGIY RIL ILK+GIVIG KKFEFLAFSSSQLR+NS WMF
Sbjct: 66   DKLNSTDLSPRASSGNEDRRTGIYKRILSILKNGIVIGDKKFEFLAFSSSQLRENSMWMF 125

Query: 984  AATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPDVEIVRN 805
            A+    NA  IREWMG F +I+NVAKYAARLGQSFGSS E+L+V ++E+E IPDVE+V++
Sbjct: 126  ASRNGRNADDIREWMGIFRQIRNVAKYAARLGQSFGSSTETLNVEKHEIEIIPDVEVVQD 185

Query: 804  GTKYVFSDGIGKISAAFAQRVSKKCGY-GFIPSAFQIRYAGYKGVVAVDPTSDMKLSLRK 628
            G KYVFSDGIGKIS+ FA+ V+ KC   G  PSAFQIRY GYKGVVAVDPTS +KLSLRK
Sbjct: 186  GVKYVFSDGIGKISSEFAKSVALKCSCKGHTPSAFQIRYGGYKGVVAVDPTSSVKLSLRK 245

Query: 627  SMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILKE 448
            SMSK++SDNTKLD+LA +K+QPCY+NRQLITLLSTLGV+DYVFE+KQKEAV+ LDAIL +
Sbjct: 246  SMSKYESDNTKLDVLAYTKFQPCYLNRQLITLLSTLGVKDYVFEKKQKEAVEQLDAILVD 305

Query: 447  PLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFVP 268
            PL+AQEAL LMSPGENTNI+KE+L CGY+P++EPFLSMMLQ FRA+KLLE+RTKTRIF+P
Sbjct: 306  PLRAQEALGLMSPGENTNILKEILMCGYRPDSEPFLSMMLQTFRASKLLELRTKTRIFIP 365

Query: 267  KGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDH---SGMMSNELKTVRGKVVVAKNP 97
             GR+MMGCLDETRTLEYGEVFVQ+S    R L +D    SG  S++   ++GK+VVAKNP
Sbjct: 366  DGRAMMGCLDETRTLEYGEVFVQFSSTKLRQLQNDFSMCSGSGSDQRFVLKGKIVVAKNP 425

Query: 96   CLHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            CLHPGDVRVLKA++VPALHHMVDCVV PQKG
Sbjct: 426  CLHPGDVRVLKAINVPALHHMVDCVVLPQKG 456


>ref|XP_023929293.1| RNA-dependent RNA polymerase 1-like [Quercus suber]
          Length = 890

 Score =  664 bits (1713), Expect = 0.0
 Identities = 335/450 (74%), Positives = 390/450 (86%), Gaps = 3/450 (0%)
 Frame = -3

Query: 1344 RAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDEEL 1165
            ++PAISLD  +GLVYV RVQITP KVYFCGPEINVSNRVLRHY + IDNFLRVSFVDEEL
Sbjct: 361  KSPAISLD--SGLVYVHRVQITPCKVYFCGPEINVSNRVLRHYLEDIDNFLRVSFVDEEL 418

Query: 1164 EKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRDNSAWMF 985
            +K+YSTDLSPRA S N + +TGIY RIL IL++G+VIG KKFEFLAFSSSQLR+NS WMF
Sbjct: 419  DKMYSTDLSPRASSGNEDRRTGIYKRILSILRNGLVIGDKKFEFLAFSSSQLRENSLWMF 478

Query: 984  AATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPDVEIVRN 805
            A+   +NAA IREWMG+F +IKNVAKYAARLGQSF SS E+LSV  +EV+ IPD+EI   
Sbjct: 479  ASRKGLNAADIREWMGNFRQIKNVAKYAARLGQSFSSSTETLSVGRHEVDIIPDIEIKYG 538

Query: 804  GTKYVFSDGIGKISAAFAQRVSKKCGY-GFIPSAFQIRYAGYKGVVAVDPTSDMKLSLRK 628
            G  YVFSDGIGKISA FA++V+ KC   G  PSAFQIRYAGYKGVVA+DPTS +KLSLRK
Sbjct: 539  GVNYVFSDGIGKISAEFAKKVALKCNCKGQTPSAFQIRYAGYKGVVAIDPTSFVKLSLRK 598

Query: 627  SMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILKE 448
            SMSK++S+NTKLD+LA SK+QPC++NRQLITLLSTLGV DYVFE+KQ+EAV+ LDAIL +
Sbjct: 599  SMSKYESNNTKLDVLAFSKFQPCFLNRQLITLLSTLGVEDYVFEKKQREAVEQLDAILTD 658

Query: 447  PLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFVP 268
            PL+AQEAL++MSPGENTN++KE+L CGY+P++EPFLSMMLQ FRA+KLLE+RTKTRIF+P
Sbjct: 659  PLRAQEALDMMSPGENTNVLKEILMCGYRPDSEPFLSMMLQTFRASKLLELRTKTRIFIP 718

Query: 267  KGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGM--MSNELKTVRGKVVVAKNPC 94
             GR+MMGCLDETRTLEYGEVFVQYS    R L +D S      ++ K V GK+VVAKNPC
Sbjct: 719  NGRAMMGCLDETRTLEYGEVFVQYSRNRHRQLYNDFSMCRGSGSDQKVVVGKIVVAKNPC 778

Query: 93   LHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            LHPGDVRVLKAV+VPALHHMVDC+VFPQKG
Sbjct: 779  LHPGDVRVLKAVNVPALHHMVDCIVFPQKG 808


>gb|POE89560.1| rna-dependent rna polymerase 1 [Quercus suber]
          Length = 917

 Score =  664 bits (1713), Expect = 0.0
 Identities = 335/450 (74%), Positives = 390/450 (86%), Gaps = 3/450 (0%)
 Frame = -3

Query: 1344 RAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDEEL 1165
            ++PAISLD  +GLVYV RVQITP KVYFCGPEINVSNRVLRHY + IDNFLRVSFVDEEL
Sbjct: 388  KSPAISLD--SGLVYVHRVQITPCKVYFCGPEINVSNRVLRHYLEDIDNFLRVSFVDEEL 445

Query: 1164 EKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRDNSAWMF 985
            +K+YSTDLSPRA S N + +TGIY RIL IL++G+VIG KKFEFLAFSSSQLR+NS WMF
Sbjct: 446  DKMYSTDLSPRASSGNEDRRTGIYKRILSILRNGLVIGDKKFEFLAFSSSQLRENSLWMF 505

Query: 984  AATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPDVEIVRN 805
            A+   +NAA IREWMG+F +IKNVAKYAARLGQSF SS E+LSV  +EV+ IPD+EI   
Sbjct: 506  ASRKGLNAADIREWMGNFRQIKNVAKYAARLGQSFSSSTETLSVGRHEVDIIPDIEIKYG 565

Query: 804  GTKYVFSDGIGKISAAFAQRVSKKCGY-GFIPSAFQIRYAGYKGVVAVDPTSDMKLSLRK 628
            G  YVFSDGIGKISA FA++V+ KC   G  PSAFQIRYAGYKGVVA+DPTS +KLSLRK
Sbjct: 566  GVNYVFSDGIGKISAEFAKKVALKCNCKGQTPSAFQIRYAGYKGVVAIDPTSFVKLSLRK 625

Query: 627  SMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILKE 448
            SMSK++S+NTKLD+LA SK+QPC++NRQLITLLSTLGV DYVFE+KQ+EAV+ LDAIL +
Sbjct: 626  SMSKYESNNTKLDVLAFSKFQPCFLNRQLITLLSTLGVEDYVFEKKQREAVEQLDAILTD 685

Query: 447  PLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFVP 268
            PL+AQEAL++MSPGENTN++KE+L CGY+P++EPFLSMMLQ FRA+KLLE+RTKTRIF+P
Sbjct: 686  PLRAQEALDMMSPGENTNVLKEILMCGYRPDSEPFLSMMLQTFRASKLLELRTKTRIFIP 745

Query: 267  KGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGM--MSNELKTVRGKVVVAKNPC 94
             GR+MMGCLDETRTLEYGEVFVQYS    R L +D S      ++ K V GK+VVAKNPC
Sbjct: 746  NGRAMMGCLDETRTLEYGEVFVQYSRNRHRQLYNDFSMCRGSGSDQKVVVGKIVVAKNPC 805

Query: 93   LHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            LHPGDVRVLKAV+VPALHHMVDC+VFPQKG
Sbjct: 806  LHPGDVRVLKAVNVPALHHMVDCIVFPQKG 835


>ref|XP_023927460.1| RNA-dependent RNA polymerase 1-like [Quercus suber]
 gb|POE91878.1| rna-dependent rna polymerase 1 [Quercus suber]
          Length = 1131

 Score =  667 bits (1722), Expect = 0.0
 Identities = 338/450 (75%), Positives = 392/450 (87%), Gaps = 3/450 (0%)
 Frame = -3

Query: 1344 RAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDEEL 1165
            ++PAISLD   GLVYVRRVQITP KVYFCGPEINVSNRVLR+Y + IDNFLRVSFVDEEL
Sbjct: 354  KSPAISLD--TGLVYVRRVQITPCKVYFCGPEINVSNRVLRNYPEDIDNFLRVSFVDEEL 411

Query: 1164 EKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRDNSAWMF 985
            +K+YSTDLSPRA S N + +TGIY RIL IL++GIVIG KKFEFLAFSSSQLR+NS WMF
Sbjct: 412  DKMYSTDLSPRASSGNEDRRTGIYKRILSILRNGIVIGDKKFEFLAFSSSQLRENSLWMF 471

Query: 984  AATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPDVEIVRN 805
            A+   +NAA IREWMG+F +IKNVAKYAARLGQSF SS E+LSV+ +E++ IPD+EI R 
Sbjct: 472  ASREGLNAAGIREWMGNFRQIKNVAKYAARLGQSFSSSTETLSVSRHEIDIIPDIEIKRG 531

Query: 804  GTKYVFSDGIGKISAAFAQRVSKKCGY-GFIPSAFQIRYAGYKGVVAVDPTSDMKLSLRK 628
            G  YVFSDGIGKISA FA++V+ KC   G  PSAFQIRYAGYKGVVA+DPTS +KLSLRK
Sbjct: 532  GVNYVFSDGIGKISAEFAKKVALKCNCKGQTPSAFQIRYAGYKGVVAIDPTSFVKLSLRK 591

Query: 627  SMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILKE 448
            SMSK++S+NTKLD+LA SK+QPC++NRQLITLLSTLGV+DYVFE+KQ+EAV+ LDAIL +
Sbjct: 592  SMSKYESNNTKLDVLAFSKFQPCFLNRQLITLLSTLGVKDYVFEKKQREAVEQLDAILTD 651

Query: 447  PLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFVP 268
            PL+AQEAL+LMSPGENTN++KE+L CGY+P++EPFLSMMLQ FRA+KLLE+RTKTRIF+P
Sbjct: 652  PLRAQEALDLMSPGENTNVLKEILMCGYRPDSEPFLSMMLQTFRASKLLELRTKTRIFIP 711

Query: 267  KGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGM--MSNELKTVRGKVVVAKNPC 94
             GR+MMGCLDETRTLEYGEVFVQYS    R L +D S      ++ K V GK+VVAKNPC
Sbjct: 712  NGRAMMGCLDETRTLEYGEVFVQYSRNRHRQLYNDFSMCRGSGSDQKVVVGKIVVAKNPC 771

Query: 93   LHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            LHPGDVRVLKAVDV ALHHMVDCVVFPQKG
Sbjct: 772  LHPGDVRVLKAVDVSALHHMVDCVVFPQKG 801


>ref|XP_023886197.1| LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase 1 [Quercus
            suber]
          Length = 1127

 Score =  666 bits (1719), Expect = 0.0
 Identities = 337/451 (74%), Positives = 392/451 (86%), Gaps = 4/451 (0%)
 Frame = -3

Query: 1344 RAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDEEL 1165
            ++P ISLD  +GLVYVRRVQITPSKVYFCGPEINVSNRVLRH+ + IDNFLRVSFVDEE+
Sbjct: 351  KSPVISLD--SGLVYVRRVQITPSKVYFCGPEINVSNRVLRHFHEDIDNFLRVSFVDEEM 408

Query: 1164 EKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRDNSAWMF 985
            +KL STDLSPRA S N + +TGIY RIL ILK+GIVIG KKFEFLAFSSSQLR+NS WMF
Sbjct: 409  DKLNSTDLSPRASSGNEDRRTGIYKRILSILKNGIVIGDKKFEFLAFSSSQLRENSMWMF 468

Query: 984  AATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPDVEIVRN 805
            A+    NA  IREWMG F +I+NVAKYAARLGQSFGSS E+L+V ++E+E IPDVE+V++
Sbjct: 469  ASRNGRNADDIREWMGIFRQIRNVAKYAARLGQSFGSSTETLNVEKHEIEIIPDVEVVQD 528

Query: 804  GTKYVFSDGIGKISAAFAQRVSKKCGY-GFIPSAFQIRYAGYKGVVAVDPTSDMKLSLRK 628
            G KYVFSDGIGKIS+ FA+ V+ KC   G  PSAFQIRY GYKGVVAVDPTS +KLSLRK
Sbjct: 529  GVKYVFSDGIGKISSEFAKSVALKCSCKGHTPSAFQIRYGGYKGVVAVDPTSSVKLSLRK 588

Query: 627  SMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILKE 448
            SMSK++SDNTKLD+LA +K+QPCY+NRQLITLLSTLGV+DYVFE+KQKEAV+ LDAIL +
Sbjct: 589  SMSKYESDNTKLDVLAYTKFQPCYLNRQLITLLSTLGVKDYVFEKKQKEAVEQLDAILVD 648

Query: 447  PLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFVP 268
            PL+AQEAL LMSPGENTNI+KE+L CGY+P++EPFLSMMLQ FRA+KLLE+RTKTRIF+P
Sbjct: 649  PLRAQEALGLMSPGENTNILKEILMCGYRPDSEPFLSMMLQTFRASKLLELRTKTRIFIP 708

Query: 267  KGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDH---SGMMSNELKTVRGKVVVAKNP 97
             GR+MMGCLDETRTLEYGEVFVQ+S    R L +D    SG  S++   ++GK+VVAKNP
Sbjct: 709  DGRAMMGCLDETRTLEYGEVFVQFSSTKLRQLQNDFSMCSGSGSDQRFVLKGKIVVAKNP 768

Query: 96   CLHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            CLHPGDVRVLKA++VPALHHMVDCVV PQKG
Sbjct: 769  CLHPGDVRVLKAINVPALHHMVDCVVLPQKG 799


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase, partial [Solanum tuberosum]
          Length = 841

 Score =  645 bits (1665), Expect = 0.0
 Identities = 328/452 (72%), Positives = 383/452 (84%), Gaps = 4/452 (0%)
 Frame = -3

Query: 1344 RAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDEEL 1165
            ++P+I+LD   GLVYVRRV +TP KVYFCGPE+NVSNRVLR+YS+ IDNFLRVSFVDEE 
Sbjct: 344  KSPSITLDD--GLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEW 401

Query: 1164 EKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRDNSAWMF 985
            EKLYSTDL P+A + N   +T IY RIL  L+ G VIG KKFEFLAFSSSQLRDNS WMF
Sbjct: 402  EKLYSTDLLPKASTGNG-IRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMF 460

Query: 984  AATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPDVEIVRN 805
            A+   + A  IR WMGDFS+IKNVAKYAARLGQSFGSSKE+LSV  +E+E IPDV++  +
Sbjct: 461  ASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQSFGSSKETLSVLRHEIEVIPDVKV--H 518

Query: 804  GTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKLSLRKS 625
            GT YVFSDGIGKISA FA+RV+ KCG  + PSAFQIRY GYKGVVAVDP S MKLSLRKS
Sbjct: 519  GTSYVFSDGIGKISADFARRVASKCGLQYTPSAFQIRYGGYKGVVAVDPYSSMKLSLRKS 578

Query: 624  MSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILKEP 445
            MSK++SDN KLD+L  SKYQPCY+NRQL+TLLSTLGV+D V E+KQKEAVD LDAIL + 
Sbjct: 579  MSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVKDDVLEQKQKEAVDQLDAILHDS 638

Query: 444  LKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFVPK 265
            LKAQEALELMSPGENTNI+K ML+CGY P+AEPFLSMMLQ FRA+KLL++RT++RIF+P 
Sbjct: 639  LKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPN 698

Query: 264  GRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDD----HSGMMSNELKTVRGKVVVAKNP 97
            GR+MMGCLDE+RTLEYG+VFVQ++GAG R  S+D    ++   +N    ++G VVVAKNP
Sbjct: 699  GRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNP 758

Query: 96   CLHPGDVRVLKAVDVPALHHMVDCVVFPQKGQ 1
            CLHPGD+RVL+AVDVPALHHMVDCVVFPQKG+
Sbjct: 759  CLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 790


>ref|XP_024194702.1| RNA-dependent RNA polymerase 1 [Rosa chinensis]
 ref|XP_024194703.1| RNA-dependent RNA polymerase 1 [Rosa chinensis]
 gb|PRQ41042.1| putative RNA-directed RNA polymerase [Rosa chinensis]
          Length = 1125

 Score =  649 bits (1674), Expect = 0.0
 Identities = 331/442 (74%), Positives = 378/442 (85%), Gaps = 4/442 (0%)
 Frame = -3

Query: 1317 DAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDEELEKLYSTDLS 1138
            D+GLVYVRRVQITPSKVYF GPE+NVSNR+LR YS  IDNFLRVSFVDEE+EKLYSTDLS
Sbjct: 361  DSGLVYVRRVQITPSKVYFSGPEVNVSNRILRQYSSDIDNFLRVSFVDEEMEKLYSTDLS 420

Query: 1137 PRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRDNSAWMFAATGRVNAA 958
            PR  ++    KT IY RIL IL++GIVIG KKFEFLAFSSSQLR+NS WMFA+T +V+A 
Sbjct: 421  PRTSTR----KTRIYNRILSILRNGIVIGEKKFEFLAFSSSQLRENSLWMFASTYKVSAD 476

Query: 957  SIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPDVEIVRNGTKYVFSDG 778
             IR  MGDF +I+NVAKYAARLGQSFGSS E+LSVA  E+E IPDV ++  G KYVFSDG
Sbjct: 477  KIRAGMGDFRKIRNVAKYAARLGQSFGSSTETLSVARSEIEVIPDVTVIWGGVKYVFSDG 536

Query: 777  IGKISAAFAQRVSKKCGY-GFIPSAFQIRYAGYKGVVAVDPTSDMKLSLRKSMSKFDSDN 601
            IGKISA FA+RV+ KCGY  F PSAFQIRY GYKGVVAVDPTS MKLSLRKSMSK+DS+N
Sbjct: 537  IGKISADFAKRVASKCGYKAFTPSAFQIRYGGYKGVVAVDPTSSMKLSLRKSMSKYDSEN 596

Query: 600  TKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILKEPLKAQEALE 421
            TKLD+LA SK+QPC++NRQLITLLSTLGV+D+VF +KQ+ AV  L+AIL +PLKA+EAL+
Sbjct: 597  TKLDVLACSKFQPCFLNRQLITLLSTLGVQDHVFLKKQRAAVQQLNAILTDPLKAEEALD 656

Query: 420  LMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFVPKGRSMMGCL 241
            LMS GE+TNI+KE+L CGYKP+ EPFLSMMLQ FRA+KLLE+RTKTRIF+P GR+MMGCL
Sbjct: 657  LMSAGESTNILKELLMCGYKPDVEPFLSMMLQTFRASKLLELRTKTRIFIPDGRAMMGCL 716

Query: 240  DETRTLEYGEVFVQYSGAGKRPLSDD---HSGMMSNELKTVRGKVVVAKNPCLHPGDVRV 70
            DETRTLEYG+VFVQ SG  +R L DD   HSG  S     + GKVVVAKNPCLHPGDVRV
Sbjct: 717  DETRTLEYGQVFVQISGNRQRQLFDDSFMHSGSSSGNCFVIEGKVVVAKNPCLHPGDVRV 776

Query: 69   LKAVDVPALHHMVDCVVFPQKG 4
            L+AV+VP LHHMVDCVVFPQKG
Sbjct: 777  LRAVNVPELHHMVDCVVFPQKG 798


>gb|KDO60788.1| hypothetical protein CISIN_1g0025862mg, partial [Citrus sinensis]
          Length = 579

 Score =  630 bits (1624), Expect = 0.0
 Identities = 325/454 (71%), Positives = 379/454 (83%), Gaps = 4/454 (0%)
 Frame = -3

Query: 1353 SRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVD 1174
            S+  +PAISLD   GLVYV RVQ+TPS+VYFCGPEINVSNRVLRH+   IDNFLR+SF+D
Sbjct: 127  SKPSSPAISLDD--GLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFID 184

Query: 1173 EELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGIVIGGKKFEFLAFSSSQLRDNSA 994
            E+L+K++STDLSPR  S    ++T IYTRIL  L++GI+IG +KFEFLAFSSSQLR++SA
Sbjct: 185  EDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSA 244

Query: 993  WMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAEYEVEKIPDVEI 814
            WMFA+   + AA IREWMG+F  I+NVAKYAARLGQSF SSKE+LSV   E+E IPDV+I
Sbjct: 245  WMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEIEIIPDVKI 304

Query: 813  VRNGTKYVFSDGIGKISAAFAQRVSKKCGY-GFIPSAFQIRYAGYKGVVAVDPTSDMKLS 637
                TKYVFSDGIGK+SA FA++V+ KCG     PSAFQIRY GYKGVVA DPTS  KLS
Sbjct: 305  EIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLS 364

Query: 636  LRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAI 457
            LR SM K++S+ TKLD+LA SKYQPC++NRQLI+LLSTLG+ D +FE+KQ+EAV  LDAI
Sbjct: 365  LRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAI 424

Query: 456  LKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRI 277
            L +PLKAQEALELMSPGENTNI+KE+L CGYKP+AEPFLSMMLQ FRA+KLLE+RTKTRI
Sbjct: 425  LTDPLKAQEALELMSPGENTNILKELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRI 484

Query: 276  FVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELK---TVRGKVVVA 106
            F+P GRSMMGCLDETRTL YG+VFVQ SGAG R L  + S   S+  +    V+G VVVA
Sbjct: 485  FIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVA 544

Query: 105  KNPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKG 4
            KNPCLHPGDVRVLKAV+VPALHHMVDCVVFPQKG
Sbjct: 545  KNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKG 578