BLASTX nr result

ID: Chrysanthemum21_contig00016580 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00016580
         (630 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022004878.1| putative F-box protein At3g52320 [Helianthus...    61   2e-07
ref|XP_021986472.1| F-box protein At5g10340-like isoform X1 [Hel...    58   2e-06
ref|XP_021986460.1| putative F-box protein At1g32420 [Helianthus...    58   3e-06
gb|OTG38374.1| putative F-box domain-containing protein [Heliant...    58   3e-06

>ref|XP_022004878.1| putative F-box protein At3g52320 [Helianthus annuus]
 gb|OTG01000.1| putative F-box domain-containing protein [Helianthus annuus]
          Length = 360

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 12/192 (6%)
 Frame = +1

Query: 88  ETHLFAMGMLGNSNQYFFI---DPTDPQNKVTLTPPDSLRNLTQDIIKVGNCVNGYLCFY 258
           + HL    +  +   Y  I   D T P  KV++T P  L+N     I   +  +G LCFY
Sbjct: 48  QQHLIVRSLNSSETNYVSIVDDDHTFPHQKVSVTFPPLLKNPKDPSIIRSS--HGLLCFY 105

Query: 259 GYNAYEDKYRLVMWNPIDGTTVSGIPGITPSEGGYKETVVGCGVCPND-GPKIVRI---- 423
             ++Y    R V+WNP    +V  +  + PS G Y  TVVG GVC     PKI++I    
Sbjct: 106 --DSYPPGGRAVIWNPSIRKSV--VVDVPPS-GNYVRTVVGFGVCHQTMDPKILKITRTT 160

Query: 424 ----WQNNIYVCTVRSRTKEWRNVNYKQDKPFTSCVMECAKFSVNGQFIYMRAYDTSKLP 591
               WQ  ++  +    T+ WR+++   D P  S  M  ++  V+G   ++     +   
Sbjct: 161 SLSPWQTEVFTLS----TRAWRSLS-SGDFPRKSICMYWSQVVVDGCLYWLARDSITVDG 215

Query: 592 RGERLDFFISFD 627
           +    D  ISFD
Sbjct: 216 KVTTYDLIISFD 227


>ref|XP_021986472.1| F-box protein At5g10340-like isoform X1 [Helianthus annuus]
          Length = 398

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 52/178 (29%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
 Frame = +1

Query: 145 DPTDPQNKVTLTPPDSLRNLTQDIIKVGNCVNGYLCFYGYNAYED-------KYRLVMWN 303
           D T PQNKV+L  P S+  L    +   +C  G +C +G+  Y+D       +   V+WN
Sbjct: 75  DDTFPQNKVSLAVPLSVDLLWNSYVVGASC--GLVCLFGFYRYDDDAEYPPGEATAVLWN 132

Query: 304 PIDGTTVSGIPGITPSEGGYKETVVGCGVCP-NDGPKIVRIWQNNI--YVCTVRSRTK-- 468
           P    +V+ IP   P   GY E + G GVCP    PKIV+I +  +    C+ R + K  
Sbjct: 133 PSIRKSVA-IP--VPDVDGYDEPIFGFGVCPATSDPKIVKITERKMKDVACSSRWQVKVF 189

Query: 469 -----EWRNVNYKQDKPFTSCVMECAKFSVNGQFIYMRAYDTSKLPRGERLDFFISFD 627
                 WRN            +   ++ ++ G + +    D      G    F ISFD
Sbjct: 190 SLSSGVWRNSFGNLSDSLADFMGPRSQVTIRGFYYWFGVGDAIGSDTG--FCFLISFD 245


>ref|XP_021986460.1| putative F-box protein At1g32420 [Helianthus annuus]
 ref|XP_021986464.1| putative F-box protein At1g32420 [Helianthus annuus]
 ref|XP_021986469.1| putative F-box protein At1g32420 [Helianthus annuus]
          Length = 398

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 17/178 (9%)
 Frame = +1

Query: 145 DPTDPQNKVTLTPPDSLRNLTQDIIKVGNCVNGYLCFYGYNAYED-------KYRLVMWN 303
           D T PQNKV+L  P S+  L    +   +C  G +C +G+  Y+D       +   V+WN
Sbjct: 75  DDTFPQNKVSLAVPLSVDLLWNSYVVGASC--GLVCLFGFYRYDDDAEYPPGEATAVLWN 132

Query: 304 PIDGTTVSGIPGITPSEGGYKETVVGCGVCP-NDGPKIVRIWQNNI--YVCTVRSRTK-- 468
           P    +V+ IP   P   GY E   G GVCP    PKIV+I +  +    C+ R + K  
Sbjct: 133 PSIRKSVA-IP--VPDVDGYDEATFGFGVCPATSDPKIVKITERKMKDVACSSRWQVKVF 189

Query: 469 -----EWRNVNYKQDKPFTSCVMECAKFSVNGQFIYMRAYDTSKLPRGERLDFFISFD 627
                 WRN            +   ++ ++ G F +    D      G    F ISFD
Sbjct: 190 SLSSGVWRNSFGNLSDSLADFMGPRSQVTIRGFFYWFGVGDAIGGDTG--FCFLISFD 245


>gb|OTG38374.1| putative F-box domain-containing protein [Helianthus annuus]
          Length = 498

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 17/178 (9%)
 Frame = +1

Query: 145 DPTDPQNKVTLTPPDSLRNLTQDIIKVGNCVNGYLCFYGYNAYED-------KYRLVMWN 303
           D T PQNKV+L  P S+  L    +   +C  G +C +G+  Y+D       +   V+WN
Sbjct: 75  DDTFPQNKVSLAVPLSVDLLWNSYVVGASC--GLVCLFGFYRYDDDAEYPPGEATAVLWN 132

Query: 304 PIDGTTVSGIPGITPSEGGYKETVVGCGVCP-NDGPKIVRIWQNNI--YVCTVRSRTK-- 468
           P    +V+ IP   P   GY E   G GVCP    PKIV+I +  +    C+ R + K  
Sbjct: 133 PSIRKSVA-IP--VPDVDGYDEATFGFGVCPATSDPKIVKITERKMKDVACSSRWQVKVF 189

Query: 469 -----EWRNVNYKQDKPFTSCVMECAKFSVNGQFIYMRAYDTSKLPRGERLDFFISFD 627
                 WRN            +   ++ ++ G F +    D      G    F ISFD
Sbjct: 190 SLSSGVWRNSFGNLSDSLADFMGPRSQVTIRGFFYWFGVGDAIGGDTG--FCFLISFD 245


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