BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00016542
         (1520 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022021684.1| RNA polymerase sigma factor sigC isoform X2 ...   621   0.0  
ref|XP_022021678.1| RNA polymerase sigma factor sigC isoform X1 ...   612   0.0  
ref|XP_023757598.1| RNA polymerase sigma factor sigC [Lactuca sa...   577   0.0  
gb|KVH89925.1| RNA polymerase sigma-70 [Cynara cardunculus var. ...   528   0.0  
ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 ...   374   e-120
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   363   e-116
ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 ...   361   e-115
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ...   358   e-114
ref|XP_019263762.1| PREDICTED: RNA polymerase sigma factor sigC ...   357   e-114
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ...   355   e-113
ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-...   356   e-113
ref|XP_021605845.1| RNA polymerase sigma factor sigC isoform X2 ...   354   e-113
ref|XP_021605843.1| RNA polymerase sigma factor sigC isoform X1 ...   354   e-113
ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC ...   354   e-113
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC ...   354   e-113
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   353   e-111
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ...   350   e-111
ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europ...   346   e-109
ref|XP_017227798.1| PREDICTED: RNA polymerase sigma factor sigC ...   342   e-108
ref|XP_019070929.1| PREDICTED: RNA polymerase sigma factor sigC ...   338   e-107

>ref|XP_022021684.1| RNA polymerase sigma factor sigC isoform X2 [Helianthus annuus]
 gb|OTG34632.1| putative RNA polymerase sigma-70 like domain-containing protein
            [Helianthus annuus]
          Length = 525

 Score =  621 bits (1602), Expect = 0.0
 Identities = 331/427 (77%), Positives = 362/427 (84%), Gaps = 1/427 (0%)
 Frame = -1

Query: 1415 MGLGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPMESENSYND 1236
            MG+GFRLNLKWGL++QPR+                FK K +NY++ARVS+P+E ++SYND
Sbjct: 1    MGVGFRLNLKWGLSVQPRLSSTSSSLPSSTHAS--FKSKVVNYDMARVSLPVEGDSSYND 58

Query: 1235 PSGVNPCSS-ISRILDTDYSETSNVQRSVGYLLQDDILTFLTSLQANKISQYRLLLENLV 1059
                N CSS  SRILDTDY ET++ +RSV  LLQDD LTFLTSLQA KISQYRLLLENLV
Sbjct: 59   HVSGNACSSSTSRILDTDYMETNSFKRSVRSLLQDDKLTFLTSLQAKKISQYRLLLENLV 118

Query: 1058 VLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEISKYPLSVSPINEETVKKPIVHS 879
            VLEDTFADSDVV+LE++ILVQLEKIGA KFLRTSFSEI KYPL+ +P+NEET+K PIV S
Sbjct: 119  VLEDTFADSDVVTLEQDILVQLEKIGASKFLRTSFSEIPKYPLANNPVNEETIK-PIVPS 177

Query: 878  TRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEA 699
            TRKVERKS+RER  KKVN VCTVEF  QA N+K             N+K GR+KITRNEA
Sbjct: 178  TRKVERKSKRERTLKKVNEVCTVEFHSQAVNHKNSRRVNVSSRRLSNSKSGRIKITRNEA 237

Query: 698  ELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRS 519
            ELSRGVKMVANLERIR MLEEETG MVSF+SWAAAAGVD+KELLENLQFGW CRDELLRS
Sbjct: 238  ELSRGVKMVANLERIRMMLEEETGPMVSFNSWAAAAGVDKKELLENLQFGWRCRDELLRS 297

Query: 518  TRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKFSTYVQYWIKKSLLML 339
            TRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKFSTYVQYWIKKSLLML
Sbjct: 298  TRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKFSTYVQYWIKKSLLML 357

Query: 338  LSRHAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALR 159
            LSRH+REIRIPFT+SKAISKIQKARKALDKGDGRCPDD EI+KF+G SLAKIESA   LR
Sbjct: 358  LSRHSREIRIPFTLSKAISKIQKARKALDKGDGRCPDDCEIAKFSGLSLAKIESATKCLR 417

Query: 158  VVGSINQ 138
            VVGSINQ
Sbjct: 418  VVGSINQ 424


>ref|XP_022021678.1| RNA polymerase sigma factor sigC isoform X1 [Helianthus annuus]
          Length = 540

 Score =  612 bits (1577), Expect = 0.0
 Identities = 331/442 (74%), Positives = 362/442 (81%), Gaps = 16/442 (3%)
 Frame = -1

Query: 1415 MGLGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPMESENSYND 1236
            MG+GFRLNLKWGL++QPR+                FK K +NY++ARVS+P+E ++SYND
Sbjct: 1    MGVGFRLNLKWGLSVQPRLSSTSSSLPSSTHAS--FKSKVVNYDMARVSLPVEGDSSYND 58

Query: 1235 PSGVNPCSS-ISRILDTDYSETSN---------------VQRSVGYLLQDDILTFLTSLQ 1104
                N CSS  SRILDTDY ET++                +RSV  LLQDD LTFLTSLQ
Sbjct: 59   HVSGNACSSSTSRILDTDYMETNSFKLKQIAVPASRILKTKRSVRSLLQDDKLTFLTSLQ 118

Query: 1103 ANKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEISKYPLSV 924
            A KISQYRLLLENLVVLEDTFADSDVV+LE++ILVQLEKIGA KFLRTSFSEI KYPL+ 
Sbjct: 119  AKKISQYRLLLENLVVLEDTFADSDVVTLEQDILVQLEKIGASKFLRTSFSEIPKYPLAN 178

Query: 923  SPINEETVKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXX 744
            +P+NEET+K PIV STRKVERKS+RER  KKVN VCTVEF  QA N+K            
Sbjct: 179  NPVNEETIK-PIVPSTRKVERKSKRERTLKKVNEVCTVEFHSQAVNHKNSRRVNVSSRRL 237

Query: 743  XNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLE 564
             N+K GR+KITRNEAELSRGVKMVANLERIR MLEEETG MVSF+SWAAAAGVD+KELLE
Sbjct: 238  SNSKSGRIKITRNEAELSRGVKMVANLERIRMMLEEETGPMVSFNSWAAAAGVDKKELLE 297

Query: 563  NLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKF 384
            NLQFGW CRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKF
Sbjct: 298  NLQFGWRCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKF 357

Query: 383  STYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFT 204
            STYVQYWIKKSLLMLLSRH+REIRIPFT+SKAISKIQKARKALDKGDGRCPDD EI+KF+
Sbjct: 358  STYVQYWIKKSLLMLLSRHSREIRIPFTLSKAISKIQKARKALDKGDGRCPDDCEIAKFS 417

Query: 203  GFSLAKIESANNALRVVGSINQ 138
            G SLAKIESA   LRVVGSINQ
Sbjct: 418  GLSLAKIESATKCLRVVGSINQ 439


>ref|XP_023757598.1| RNA polymerase sigma factor sigC [Lactuca sativa]
 gb|PLY90084.1| hypothetical protein LSAT_6X7620 [Lactuca sativa]
          Length = 525

 Score =  577 bits (1486), Expect = 0.0
 Identities = 309/426 (72%), Positives = 342/426 (80%)
 Frame = -1

Query: 1415 MGLGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPMESENSYND 1236
            MG+GFR+NLKW L++QPR+                FK KDI+Y+LAR S+ MESE SY+D
Sbjct: 1    MGVGFRINLKWVLSVQPRLSSNSPSLSSTYAS---FKSKDIHYDLARASLSMESETSYSD 57

Query: 1235 PSGVNPCSSISRILDTDYSETSNVQRSVGYLLQDDILTFLTSLQANKISQYRLLLENLVV 1056
            P     CSS SRILD DYSET N   +V  LL++D LTFLTSLQANKISQYRLLLENLV 
Sbjct: 58   PLSGRTCSSTSRILDIDYSETRN---NVKNLLREDKLTFLTSLQANKISQYRLLLENLVA 114

Query: 1055 LEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEISKYPLSVSPINEETVKKPIVHST 876
            LEDTFADSDVV+LE++IL QLEK+GALKFL TSFS+I K+P   + I E+TVK P+V ST
Sbjct: 115  LEDTFADSDVVTLEQDILFQLEKLGALKFLHTSFSQIPKHPFPTNSITEKTVK-PVVPST 173

Query: 875  RKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAE 696
            RK++RKSQRER S K N VC VEF  Q    K             N+K G++K TRNEAE
Sbjct: 174  RKIKRKSQRERTSTKANDVCMVEFHSQPITRKNSRRVNFSSKRSSNSKIGKLKFTRNEAE 233

Query: 695  LSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRST 516
            LS+GVKMVA LERIR +LEEE G  VSFSSWA AAGVD+KELLENLQFGWCCRDELLRST
Sbjct: 234  LSQGVKMVAELERIRMILEEEVGPRVSFSSWAEAAGVDKKELLENLQFGWCCRDELLRST 293

Query: 515  RSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKFSTYVQYWIKKSLLMLL 336
            RSLVIYL+KNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKFSTYVQYWIKKSLLMLL
Sbjct: 294  RSLVIYLSKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKFSTYVQYWIKKSLLMLL 353

Query: 335  SRHAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRV 156
            SRHAREIRIPFTMSKAIS+IQKARKALD GDGRCP+  EI+KFTG SLAKIESAN  LRV
Sbjct: 354  SRHAREIRIPFTMSKAISRIQKARKALDNGDGRCPNACEIAKFTGLSLAKIESANKCLRV 413

Query: 155  VGSINQ 138
            VGSINQ
Sbjct: 414  VGSINQ 419


>gb|KVH89925.1| RNA polymerase sigma-70 [Cynara cardunculus var. scolymus]
          Length = 502

 Score =  528 bits (1361), Expect = 0.0
 Identities = 291/426 (68%), Positives = 326/426 (76%)
 Frame = -1

Query: 1415 MGLGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPMESENSYND 1236
            MGLGFRLNLKWGL++QP +                FK KDINY++ARVS+PMESE SYND
Sbjct: 1    MGLGFRLNLKWGLSIQPPLSSNSSFFPSSTYAS--FKGKDINYDMARVSLPMESETSYND 58

Query: 1235 PSGVNPCSSISRILDTDYSETSNVQRSVGYLLQDDILTFLTSLQANKISQYRLLLENLVV 1056
            P   N CSS SRILD DYSET N++RS G  L+ D LTFLTSLQAN ISQYRLLLENLVV
Sbjct: 59   PVNGNACSSTSRILDIDYSETGNIKRSGGSSLRHDKLTFLTSLQANNISQYRLLLENLVV 118

Query: 1055 LEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEISKYPLSVSPINEETVKKPIVHST 876
            LEDTFADSDVV+LER+ILVQLEK+GAL+ LRTSFSEI K+P S + INE  V KPIV ST
Sbjct: 119  LEDTFADSDVVTLERDILVQLEKLGALRLLRTSFSEIQKHPFSTNSINEGIV-KPIVPST 177

Query: 875  RKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAE 696
            RK++RKSQRER SKK NGV  + F+ +A  +K             N+K GR+KITRNEAE
Sbjct: 178  RKIQRKSQRERTSKKGNGV-PMGFRSEAIKHKNSRRVNFSSRRSSNSKAGRLKITRNEAE 236

Query: 695  LSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRST 516
            LS+GVKMVANLERIR MLEE+TG MVSFSSWAAAAG+D+K LLENLQFGWCCRDELL+ST
Sbjct: 237  LSQGVKMVANLERIRMMLEEDTGPMVSFSSWAAAAGIDKKVLLENLQFGWCCRDELLKST 296

Query: 515  RSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKFSTYVQYWIKKSLLMLL 336
            RSLVIY+AKNYNGQGIAFKDLI                          QYWIKKSLLMLL
Sbjct: 297  RSLVIYIAKNYNGQGIAFKDLI--------------------------QYWIKKSLLMLL 330

Query: 335  SRHAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRV 156
            SRH+REIRIP T+SKAIS+IQKARKAL  GDGR PDD E++KFTG SLAKI SA+N LRV
Sbjct: 331  SRHSREIRIPLTLSKAISQIQKARKALASGDGRWPDDCEVAKFTGLSLAKIGSASNCLRV 390

Query: 155  VGSINQ 138
            VGSINQ
Sbjct: 391  VGSINQ 396


>ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 [Sesamum indicum]
          Length = 556

 Score =  374 bits (960), Expect = e-120
 Identities = 223/460 (48%), Positives = 298/460 (64%), Gaps = 34/460 (7%)
 Frame = -1

Query: 1409 LGFRLNLKW-GLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVS---IPMESENSY 1242
            +GFRLNLKW GL++Q                    + +D +Y LAR+S   +      + 
Sbjct: 1    MGFRLNLKWSGLSVQSPFSTSTSSLPYTYPC----RGRDTSYILARLSASSVLYGETETL 56

Query: 1241 NDPSGVNPCSSISRILDTDYSETSNVQRSVGY--------LLQ--------DDILTFLTS 1110
            ND S V+ CSS  ++L+  Y  T   + +VG         LL+        +D L +LTS
Sbjct: 57   NDASRVHVCSSSPQLLENYYLGTRETKVAVGKGSSDGLSSLLEKHIETSNSEDKLAYLTS 116

Query: 1109 LQANKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEISKYPL 930
            LQA ++SQ+RLL++NL +LED F+DS+VV LER+IL QLE++GAL+   +  S   K   
Sbjct: 117  LQATQLSQFRLLMKNLDMLEDMFSDSNVVRLERDILEQLERLGALRLFYSCLSRTLKSST 176

Query: 929  S--VSPINEETVKKP------------IVHSTRKVERKSQRERMSKKVNGVCTVEFQPQA 792
            S  +S    E V++P            +V S RK  RK +R+RM  K +G+ T E  P  
Sbjct: 177  SFDLSNATTELVEEPKVNDSVDNHVGEVVRSGRKELRKLRRKRMLDKESGITTQEL-PTV 235

Query: 791  TNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSF 612
            T  K               KR R  I RNEAE+S GVK+VA LE++RT+LEEETG + S 
Sbjct: 236  TISKQHKYASARRASRSRNKRQR--IARNEAEMSSGVKLVAELEKVRTILEEETGQVASL 293

Query: 611  SSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVG 432
            SSWA AAG+ +KEL +NL +GW CRDELLRSTRSLV+++A+NY G G+AF+DLIQAGN+G
Sbjct: 294  SSWAEAAGIKKKELQQNLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIG 353

Query: 431  VLQGAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALD 252
            VLQGAERFD+SRGYKFSTYVQYWI+KS+  L++RHAR +RIP T+SK I+++Q+ARKAL 
Sbjct: 354  VLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVARHARGVRIPCTLSKVINQVQRARKALS 413

Query: 251  KGDGRCPDDSEISKFTGFSLAKIESANNALRVVGSINQII 132
              +G+ PDDS+I+K+TG S+AKI SA+  LRVVGSI+Q I
Sbjct: 414  TSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQKI 453


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
 emb|CBI20603.3| unnamed protein product, partial [Vitis vinifera]
          Length = 561

 Score =  363 bits (933), Expect = e-116
 Identities = 210/464 (45%), Positives = 282/464 (60%), Gaps = 35/464 (7%)
 Frame = -1

Query: 1415 MGLGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPM----ESEN 1248
            MG+GFRLNLKW       I               S + K+ +++  R S P     + E+
Sbjct: 1    MGMGFRLNLKWDFP----ISCPTLTNSPSRLCTSSVQGKEASFDSTRFSFPSVTSEDCES 56

Query: 1247 SYNDPSGVNPCSSIS-RILDTDYSETSNVQRSVGYL---------------LQDDILTFL 1116
             Y DP     CSS + +  + DYS    ++  +G                 + +DI   +
Sbjct: 57   LYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIVNASQAPIGEDISASV 116

Query: 1115 TSLQANKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEISKY 936
              LQA+K SQ+ LLLENL +LE+ FADS++V LER+I+VQL ++GALK  +   S   K 
Sbjct: 117  AGLQASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKT 176

Query: 935  PLSVSPINEET---------------VKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQ 801
              S    +  T               + K +V S +K ERKS+RER  +K + +      
Sbjct: 177  STSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLP 236

Query: 800  PQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSM 621
             +                  N++R R+   +NEAE+S+GVK+VANLERIR  LEEE G +
Sbjct: 237  SKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHV 296

Query: 620  VSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAG 441
             S S+WA AAGVD+K L + LQFGW CRDELLRST SLV+Y+A+NY G G+AF+D++QAG
Sbjct: 297  ASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAG 356

Query: 440  NVGVLQGAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARK 261
            N+GVLQGAERFD ++GY+FSTYVQYWI+KS+  L++RHAR ++IPFT+++AI +IQKARK
Sbjct: 357  NLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARK 416

Query: 260  ALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVGSINQIIQ 129
            AL K  GR PDD+EI+KFTG SLAKI SA N LRVVGS +Q  Q
Sbjct: 417  ALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQ 460


>ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 [Sesamum indicum]
          Length = 578

 Score =  361 bits (927), Expect = e-115
 Identities = 223/482 (46%), Positives = 298/482 (61%), Gaps = 56/482 (11%)
 Frame = -1

Query: 1409 LGFRLNLKW-GLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVS---IPMESENSY 1242
            +GFRLNLKW GL++Q                    + +D +Y LAR+S   +      + 
Sbjct: 1    MGFRLNLKWSGLSVQSPFSTSTSSLPYTYPC----RGRDTSYILARLSASSVLYGETETL 56

Query: 1241 NDPSGVNPCSSISRILDTDYSETSNVQRSVGY--------LLQ--------DDILTFLTS 1110
            ND S V+ CSS  ++L+  Y  T   + +VG         LL+        +D L +LTS
Sbjct: 57   NDASRVHVCSSSPQLLENYYLGTRETKVAVGKGSSDGLSSLLEKHIETSNSEDKLAYLTS 116

Query: 1109 LQANKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEISKYPL 930
            LQA ++SQ+RLL++NL +LED F+DS+VV LER+IL QLE++GAL+   +  S   K   
Sbjct: 117  LQATQLSQFRLLMKNLDMLEDMFSDSNVVRLERDILEQLERLGALRLFYSCLSRTLKSST 176

Query: 929  S--VSPINEETVKKP------------IVHSTRKVERKSQRERMSKKVNGVCTVEFQPQA 792
            S  +S    E V++P            +V S RK  RK +R+RM  K +G+ T E  P  
Sbjct: 177  SFDLSNATTELVEEPKVNDSVDNHVGEVVRSGRKELRKLRRKRMLDKESGITTQEL-PTV 235

Query: 791  TNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSF 612
            T  K               KR R  I RNEAE+S GVK+VA LE++RT+LEEETG + S 
Sbjct: 236  TISKQHKYASARRASRSRNKRQR--IARNEAEMSSGVKLVAELEKVRTILEEETGQVASL 293

Query: 611  SSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQA---- 444
            SSWA AAG+ +KEL +NL +GW CRDELLRSTRSLV+++A+NY G G+AF+DLIQA    
Sbjct: 294  SSWAEAAGIKKKELQQNLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAEYCS 353

Query: 443  ------------------GNVGVLQGAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHARE 318
                              GN+GVLQGAERFD+SRGYKFSTYVQYWI+KS+  L++RHAR 
Sbjct: 354  HKKPKLEFVLFIEHSWNAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVARHARG 413

Query: 317  IRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVGSINQ 138
            +RIP T+SK I+++Q+ARKAL   +G+ PDDS+I+K+TG S+AKI SA+  LRVVGSI+Q
Sbjct: 414  VRIPCTLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQ 473

Query: 137  II 132
             I
Sbjct: 474  KI 475


>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC [Nicotiana
            tomentosiformis]
          Length = 572

 Score =  358 bits (919), Expect = e-114
 Identities = 208/458 (45%), Positives = 283/458 (61%), Gaps = 32/458 (6%)
 Frame = -1

Query: 1415 MGLGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPMESEN---S 1245
            + +GFRL LKWG ++QP                  FK K+  Y+ AR   P  +E+   S
Sbjct: 16   LAMGFRLYLKWGFSVQPPFSSNSSSWPSSHS----FKGKEALYDPARSLKPFINEDCEPS 71

Query: 1244 YNDPSGVNPCSSISRILDTDYSETSNVQRSVGYLLQDDILTFL--------------TSL 1107
            ++DP  V  C S  ++  +D S T+ ++  +G     +I   +              T L
Sbjct: 72   HSDPFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIYGDIGSPKNVISLDGEKPTYL 131

Query: 1106 QANKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRT---------SF 954
               +   + LL++NL +LE+ FADS+V  LER+I+VQL+K+GAL+F  T         +F
Sbjct: 132  NTTRALHFSLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGALEFFHTCLSRTNHCSTF 191

Query: 953  SEISKYPLSVSPINEET------VKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQA 792
             E+   P  +    E+       + K +V S +K ERKS+R R S+  N + TV+   + 
Sbjct: 192  PEVLDVPRELIEEIEKDGLVGNGIDKVVVRSKKKQERKSRRNRASRNANDIITVQPHTKN 251

Query: 791  TNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSF 612
                              ++  R KI +NEAE+SRGVK+VA LERIR++LEEETG + SF
Sbjct: 252  IQEDLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASF 311

Query: 611  SSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVG 432
            SSWA AAGV++KEL + L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+G
Sbjct: 312  SSWAEAAGVEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMG 371

Query: 431  VLQGAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALD 252
            VLQGA RFD +RGYKFSTYVQYWI+KSL  L+++HAR IRIPFT+ KAI++I KARKAL 
Sbjct: 372  VLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAINQIHKARKALS 431

Query: 251  KGDGRCPDDSEISKFTGFSLAKIESANNALRVVGSINQ 138
            +  G+ P D EI+K+TG S A+I  A+  LRVVGSI+Q
Sbjct: 432  RSHGKFPGDDEIAKYTGLSTARIAMASKCLRVVGSIDQ 469


>ref|XP_019263762.1| PREDICTED: RNA polymerase sigma factor sigC [Nicotiana attenuata]
 gb|OIT36910.1| rna polymerase sigma factor sigc [Nicotiana attenuata]
          Length = 555

 Score =  357 bits (915), Expect = e-114
 Identities = 208/455 (45%), Positives = 281/455 (61%), Gaps = 31/455 (6%)
 Frame = -1

Query: 1409 LGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPM---ESENSYN 1239
            +GFRL+LKWG ++QP                  FK K+  Y+ AR   P    + E S++
Sbjct: 1    MGFRLHLKWGFSVQPPFSPNSASAWPSSHS---FKGKEALYDPARSLKPFINGDCEPSHS 57

Query: 1238 DPSGVNPCSSISRILDTDYSETSNVQRSVGYLLQDDILTFLTS--------------LQA 1101
            DP  V  C S  ++  +D S T+ ++  +G     +I   + S              L  
Sbjct: 58   DPFRVRTCLSDPQLWTSDISVTTEIKTRIGRGSPSNIYGDIGSDKIGISPDGEKPLYLNT 117

Query: 1100 NKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKF--------LRTSFSEI 945
             +   + LL++N+ +LE+ FADS++  LE NILVQLEK+GAL+F        L ++F E+
Sbjct: 118  TRAPHFSLLMKNIDLLENMFADSEMSRLENNILVQLEKLGALEFFHSRLSRTLHSTFPEV 177

Query: 944  SKYPLSVSPINEET------VKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNY 783
               P  +    E+       + K +V S +K ERKS+R R S   N + TV    +    
Sbjct: 178  LDVPRDLIEEIEKDDLVGNGINKVVVRSRKKQERKSRRNRASGIANDIITVHPHTKNIQE 237

Query: 782  KXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSW 603
                           ++  R KI +NEAE+SRGVK+VA LERIR++LEEETG + SFSSW
Sbjct: 238  DMQQPKFYSGKRTHASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSW 297

Query: 602  AAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQ 423
            A AAGV++KEL  +L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GVLQ
Sbjct: 298  AEAAGVEQKELQHHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQ 357

Query: 422  GAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALDKGD 243
            GA RFD +RGYKFSTYVQYWI+KSL  L+++HAR IRIPFT+ KAI++I KARKAL +  
Sbjct: 358  GAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAINQIHKARKALSRSH 417

Query: 242  GRCPDDSEISKFTGFSLAKIESANNALRVVGSINQ 138
            G+ P D+EI+K+TG S A+I  A+  LRVVGSI+Q
Sbjct: 418  GKFPGDNEIAKYTGLSTARIAMASKCLRVVGSIDQ 452


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Solanum
            lycopersicum]
          Length = 551

 Score =  355 bits (912), Expect = e-113
 Identities = 209/456 (45%), Positives = 283/456 (62%), Gaps = 32/456 (7%)
 Frame = -1

Query: 1409 LGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPM---ESENSYN 1239
            +GFRL+LKWG +LQP                  FK ++  Y+ AR   P    + E S++
Sbjct: 1    MGFRLHLKWGFSLQPPFSSNSSSWPSSHS----FKGRETLYDPARSLKPFINGDCEPSHS 56

Query: 1238 DPSGVNPCSSISRILDTDYSET------------SNVQRSVG-YLLQDDILTFLTSLQAN 1098
            DP  V  C S  ++  +D S T            SNV   +G Y +  +  T+L +    
Sbjct: 57   DPFRVQTCLSDPQLWTSDASVTTETKTRNGRGSPSNVYGDIGSYKIDGEKPTYLNT---T 113

Query: 1097 KISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEI---SKYPLS 927
            K   + LL++NL +LE+ FADS++  LER+ILVQLEK+GAL+F  T  S     S +P  
Sbjct: 114  KSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSSFP-K 172

Query: 926  VSPINEETVK-------------KPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATN 786
            V  +  E +K             K +V S +K ER S+R+R S+  N + TV+   +   
Sbjct: 173  VLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQ 232

Query: 785  YKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSS 606
                            ++  R KI +NEAE+S+GVK+VA LERIR++LEEETG + +FSS
Sbjct: 233  EDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSS 292

Query: 605  WAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVL 426
            WA AAG+++KEL ++L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GVL
Sbjct: 293  WAKAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVL 352

Query: 425  QGAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALDKG 246
            QGA RFD +RGYKFSTYVQYWI+KSL  L+++HAR +RIPFT+ K I++I KARK L + 
Sbjct: 353  QGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRS 412

Query: 245  DGRCPDDSEISKFTGFSLAKIESANNALRVVGSINQ 138
             G+ P D EI+KFTG S A+I  A+  LRVVGSI+Q
Sbjct: 413  HGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQ 448


>ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-like [Nicotiana tabacum]
          Length = 572

 Score =  356 bits (913), Expect = e-113
 Identities = 207/458 (45%), Positives = 282/458 (61%), Gaps = 32/458 (6%)
 Frame = -1

Query: 1415 MGLGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPMESEN---S 1245
            + +GFRL LKWG ++QP                   K K+  Y+ AR   P  +E+   S
Sbjct: 16   LAMGFRLYLKWGFSVQPPFSSNSSSWPSSHS----LKGKEALYDPARSLKPFINEDCEPS 71

Query: 1244 YNDPSGVNPCSSISRILDTDYSETSNVQRSVGYLLQDDILTFL--------------TSL 1107
            ++DP  V  C S  ++  +D S T+ ++  +G     +I   +              T L
Sbjct: 72   HSDPFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIYGDIGSPKNGITLDGEKPTYL 131

Query: 1106 QANKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRT---------SF 954
               +   + LL++NL +LE+ FADS+V  LER+I+VQL+K+GAL+F  T         +F
Sbjct: 132  NTTRALHFSLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGALEFFHTCLSRTNHCSTF 191

Query: 953  SEISKYPLSVSPINEET------VKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQA 792
             E+   P  +    E+       + K +V S +K ERKS+R R S+  N + TV+   + 
Sbjct: 192  PEVLDVPRELIEEIEKDGLVGNGIDKVVVRSKKKQERKSRRNRASRNANDIITVQPHTKN 251

Query: 791  TNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSF 612
                              ++  R KI +NEAE+SRGVK+VA LERIR++LEEETG + SF
Sbjct: 252  IQEDLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASF 311

Query: 611  SSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVG 432
            SSWA AAGV++KEL + L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+G
Sbjct: 312  SSWAEAAGVEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMG 371

Query: 431  VLQGAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALD 252
            VLQGA RFD +RGYKFSTYVQYWI+KSL  L+++HAR IRIPFT+ KAI++I KARKAL 
Sbjct: 372  VLQGAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAINQIHKARKALS 431

Query: 251  KGDGRCPDDSEISKFTGFSLAKIESANNALRVVGSINQ 138
            +  G+ P D EI+K+TG S A+I  A+  LRVVGSI+Q
Sbjct: 432  RSHGKFPGDDEIAKYTGLSTARIAMASKCLRVVGSIDQ 469


>ref|XP_021605845.1| RNA polymerase sigma factor sigC isoform X2 [Manihot esculenta]
          Length = 539

 Score =  354 bits (909), Expect = e-113
 Identities = 206/440 (46%), Positives = 286/440 (65%), Gaps = 14/440 (3%)
 Frame = -1

Query: 1415 MGLGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVS----IPMESEN 1248
            MG+GFR +LK G  +  +                  K ++ ++NL R+S    I  E + 
Sbjct: 1    MGVGFRPSLKCGFPVHSQFVSNSPSRLPSSV-----KGREGSFNLTRLSFLSVISEEGDI 55

Query: 1247 SYNDPSGVNPCSSISRILDTDYSETSNVQRSVG---YLLQDDILTFLTSLQANKISQYRL 1077
             Y DP     CS   +IL+ ++++    +   G   +   D ++   TS   ++ S++ L
Sbjct: 56   LYRDPLKAFACSPGLQILENEHTQVEGSKMIFGKGSHNTIDILVPPSTSSSKDRHSRFSL 115

Query: 1076 LLENLVVLEDTFADSDVVSLERNILVQLEKIGALKF----LRTSFSEISKYPLS---VSP 918
            LLENL +LE++FADSDV+ LER+IL+ L ++GALK     LR +FS++    +    ++ 
Sbjct: 116  LLENLNILEESFADSDVLKLERDILMHLGRLGALKLFNTCLRRTFSDVPTETVGECEING 175

Query: 917  INEETVKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXN 738
            I+   V + IV S +K ERKS+R+R S K N V ++    ++                 N
Sbjct: 176  ISNNHVNEVIVRSAKKEERKSRRKRASSKTNLVASLSLPSKSIQSGPGKPTYSSAKKASN 235

Query: 737  TKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENL 558
            ++  R+ I RNEAE+SRGVKMVA LE+IRT LEEE G +VS+S WA AAG+D KEL + L
Sbjct: 236  SQSRRLVIARNEAEMSRGVKMVAELEKIRTTLEEEAGRVVSWSCWAEAAGLDMKELQQRL 295

Query: 557  QFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKFST 378
            +FGW CRDEL+RSTR LV+Y A+NY G GIA +DL+QAG VGVLQGAERFD +RGY+FST
Sbjct: 296  RFGWHCRDELIRSTRPLVLYFARNYRGMGIALEDLLQAGTVGVLQGAERFDHTRGYRFST 355

Query: 377  YVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGF 198
            YVQYWI+KS+  +++RHAR I+IP T+S+AI++IQKARKAL+   G+  DD+EI+KFTG 
Sbjct: 356  YVQYWIRKSMSKIVTRHARGIQIPCTLSQAINQIQKARKALNTRYGKYADDTEIAKFTGL 415

Query: 197  SLAKIESANNALRVVGSINQ 138
            SLAKIESA+  LRVVGSI+Q
Sbjct: 416  SLAKIESASKCLRVVGSIDQ 435


>ref|XP_021605843.1| RNA polymerase sigma factor sigC isoform X1 [Manihot esculenta]
 gb|OAY54212.1| hypothetical protein MANES_03G057200 [Manihot esculenta]
          Length = 540

 Score =  354 bits (909), Expect = e-113
 Identities = 206/440 (46%), Positives = 286/440 (65%), Gaps = 14/440 (3%)
 Frame = -1

Query: 1415 MGLGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVS----IPMESEN 1248
            MG+GFR +LK G  +  +                  K ++ ++NL R+S    I  E + 
Sbjct: 1    MGVGFRPSLKCGFPVHSQFVSNSPSRLPSSSV----KGREGSFNLTRLSFLSVISEEGDI 56

Query: 1247 SYNDPSGVNPCSSISRILDTDYSETSNVQRSVG---YLLQDDILTFLTSLQANKISQYRL 1077
             Y DP     CS   +IL+ ++++    +   G   +   D ++   TS   ++ S++ L
Sbjct: 57   LYRDPLKAFACSPGLQILENEHTQVEGSKMIFGKGSHNTIDILVPPSTSSSKDRHSRFSL 116

Query: 1076 LLENLVVLEDTFADSDVVSLERNILVQLEKIGALKF----LRTSFSEISKYPLS---VSP 918
            LLENL +LE++FADSDV+ LER+IL+ L ++GALK     LR +FS++    +    ++ 
Sbjct: 117  LLENLNILEESFADSDVLKLERDILMHLGRLGALKLFNTCLRRTFSDVPTETVGECEING 176

Query: 917  INEETVKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXN 738
            I+   V + IV S +K ERKS+R+R S K N V ++    ++                 N
Sbjct: 177  ISNNHVNEVIVRSAKKEERKSRRKRASSKTNLVASLSLPSKSIQSGPGKPTYSSAKKASN 236

Query: 737  TKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENL 558
            ++  R+ I RNEAE+SRGVKMVA LE+IRT LEEE G +VS+S WA AAG+D KEL + L
Sbjct: 237  SQSRRLVIARNEAEMSRGVKMVAELEKIRTTLEEEAGRVVSWSCWAEAAGLDMKELQQRL 296

Query: 557  QFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKFST 378
            +FGW CRDEL+RSTR LV+Y A+NY G GIA +DL+QAG VGVLQGAERFD +RGY+FST
Sbjct: 297  RFGWHCRDELIRSTRPLVLYFARNYRGMGIALEDLLQAGTVGVLQGAERFDHTRGYRFST 356

Query: 377  YVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGF 198
            YVQYWI+KS+  +++RHAR I+IP T+S+AI++IQKARKAL+   G+  DD+EI+KFTG 
Sbjct: 357  YVQYWIRKSMSKIVTRHARGIQIPCTLSQAINQIQKARKALNTRYGKYADDTEIAKFTGL 416

Query: 197  SLAKIESANNALRVVGSINQ 138
            SLAKIESA+  LRVVGSI+Q
Sbjct: 417  SLAKIESASKCLRVVGSIDQ 436


>ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum pennellii]
          Length = 551

 Score =  354 bits (909), Expect = e-113
 Identities = 208/456 (45%), Positives = 283/456 (62%), Gaps = 32/456 (7%)
 Frame = -1

Query: 1409 LGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPM---ESENSYN 1239
            +GFRL+LKWG +LQP                  FK ++  Y+ AR   P    + E S++
Sbjct: 1    MGFRLHLKWGFSLQPPFSSNSSSWPSSHS----FKGRETLYDPARSLKPFINGDCEPSHS 56

Query: 1238 DPSGVNPCSSISRILDTDYSET------------SNVQRSVG-YLLQDDILTFLTSLQAN 1098
            DP  V  C S  ++  +D S T            SNV   +G Y +  +  T++ +    
Sbjct: 57   DPFRVQTCLSDPQLWTSDASVTIETKTRNGRGSPSNVYGDIGSYKIDGEKPTYINT---T 113

Query: 1097 KISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEI---SKYPLS 927
            K   + LL++NL +LE+ FADS++  LER+ILVQLEK+GAL+F  T  S     S +P  
Sbjct: 114  KSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFP-K 172

Query: 926  VSPINEETVK-------------KPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATN 786
            V  +  E +K             K +V S +K ER S+R+R S+  N + TV+   +   
Sbjct: 173  VLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQ 232

Query: 785  YKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSS 606
                            ++  R KI +NEAE+S+GVK+VA LERIR++LEEETG + +FSS
Sbjct: 233  EDLQQPKFYSGKRTHASRNKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGRVATFSS 292

Query: 605  WAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVL 426
            WA AAG+++KEL ++L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GVL
Sbjct: 293  WAEAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVL 352

Query: 425  QGAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALDKG 246
            QGA RFD +RGYKFSTYVQYWI+KSL  L+++HAR +RIPFT+ K I++I KARK L + 
Sbjct: 353  QGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRS 412

Query: 245  DGRCPDDSEISKFTGFSLAKIESANNALRVVGSINQ 138
             G+ P D EI+KFTG S A+I  A+  LRVVGSI+Q
Sbjct: 413  HGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQ 448


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
            tuberosum]
          Length = 555

 Score =  354 bits (908), Expect = e-113
 Identities = 206/457 (45%), Positives = 279/457 (61%), Gaps = 33/457 (7%)
 Frame = -1

Query: 1409 LGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPM---ESENSYN 1239
            +GFRL+LKWG ++QP                  FK ++  Y+ AR   P    + E S++
Sbjct: 1    MGFRLHLKWGFSVQPPFSSNSSSWPSSHS----FKGREALYDPARSLKPFITGDCEPSHS 56

Query: 1238 DPSGVNPCSSISRILDTDYSETSNVQRSVGYLLQDDILTFL--------------TSLQA 1101
            DP  V  C S  ++  +D S T+ ++   G     ++   +              T L  
Sbjct: 57   DPFRVQTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEKPTYLNT 116

Query: 1100 NKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEI---SKYPL 930
             K   + LL++NL +LE+ FADS++  LER+ILVQLEK+GAL+F  T  S     S +P 
Sbjct: 117  TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFP- 175

Query: 929  SVSPINEETVK-------------KPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQAT 789
             V  +  E +K             K +V S +K ERKS+R R S+  N + TV+   +  
Sbjct: 176  KVLDVPRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNI 235

Query: 788  NYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFS 609
                             ++  R KI +NEAE+SRGVK+VA LERIR++LEEETG + +FS
Sbjct: 236  QEDLQQPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFS 295

Query: 608  SWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGV 429
            SWA AAG+++KEL + L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GV
Sbjct: 296  SWAEAAGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGV 355

Query: 428  LQGAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALDK 249
            LQGA RFD +RGYKFSTYVQYWI+KSL  L+++HAR +RIPFT+ K I++I KARK L +
Sbjct: 356  LQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSR 415

Query: 248  GDGRCPDDSEISKFTGFSLAKIESANNALRVVGSINQ 138
              G+ P D EI+KFTG S A+I  A+  LRVVGSI+Q
Sbjct: 416  SHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQ 452


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  353 bits (905), Expect = e-111
 Identities = 198/426 (46%), Positives = 268/426 (62%), Gaps = 35/426 (8%)
 Frame = -1

Query: 1301 KDINYNLARVSIPM----ESENSYNDPSGVNPCSSIS-RILDTDYSETSNVQRSVGYL-- 1143
            K+ +++  R S P     + E+ Y DP     CSS + +  + DYS    ++  +G    
Sbjct: 85   KEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKCSH 144

Query: 1142 -------------LQDDILTFLTSLQANKISQYRLLLENLVVLEDTFADSDVVSLERNIL 1002
                         + +DI   +  LQA+K SQ+ LLLENL +LE+ FADS++V LER+I+
Sbjct: 145  GDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLERDIM 204

Query: 1001 VQLEKIGALKFLRTSFSEISKYPLSVSPINEET---------------VKKPIVHSTRKV 867
            VQL ++GALK  +   S   K   S    +  T               + K +V S +K 
Sbjct: 205  VQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKE 264

Query: 866  ERKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSR 687
            ERKS+RER  +K + +       +                  N++R R+   +NEAE+S+
Sbjct: 265  ERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSK 324

Query: 686  GVKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSL 507
            GVK+VANLERIR  LEEE G + S S+WA AAGVD+K L + LQFGW CRDELLRST SL
Sbjct: 325  GVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSL 384

Query: 506  VIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKFSTYVQYWIKKSLLMLLSRH 327
            V+Y+A+NY G G+AF+D++QAGN+GVLQGAERFD ++GY+FSTYVQYWI+KS+  L++RH
Sbjct: 385  VLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARH 444

Query: 326  AREIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVGS 147
            AR ++IPFT+++AI +IQKARKAL K  GR PDD+EI+KFTG SLAKI SA N LRVVGS
Sbjct: 445  ARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGS 504

Query: 146  INQIIQ 129
             +Q  Q
Sbjct: 505  TDQSFQ 510


>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
            sylvestris]
 ref|XP_016482950.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
            [Nicotiana tabacum]
          Length = 554

 Score =  350 bits (898), Expect = e-111
 Identities = 206/455 (45%), Positives = 279/455 (61%), Gaps = 31/455 (6%)
 Frame = -1

Query: 1409 LGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPM---ESENSYN 1239
            +GFRL+LKWG ++QP                  FK K+  Y+ AR   P    + E S++
Sbjct: 1    MGFRLHLKWGFSVQPPFSSNSSAWPSSHS----FKGKEALYDPARSLKPFINGDCEPSHS 56

Query: 1238 DPSGVNPCSSISRILDTDYSETSNVQRSVGYLLQDDILTFLTS--------------LQA 1101
            DP  V  C S  ++  +D S T+ ++  +G     +I   + S              L  
Sbjct: 57   DPFRVRTCLSDPQLWTSDISVTTEIKTRIGRGSPSNIYGDIGSDKTGISPDGEKPSYLST 116

Query: 1100 NKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFS--------EI 945
             +   + LL++N+ +LE+ FADS++  LE +ILVQLEK+GAL+F  +  S        E+
Sbjct: 117  TRAPHFSLLMKNIDLLENMFADSEMSRLENDILVQLEKLGALEFFHSRLSRTLHSTSPEV 176

Query: 944  SKYPLS-VSPINEET-----VKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNY 783
               P   V  I ++      + K +V S +K ER S+R R S   N + TV    +    
Sbjct: 177  LDVPRELVEEIEKDDLVGNGIDKVVVRSRKKQERNSRRNRASGIANDIITVHPHTKNIQE 236

Query: 782  KXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSW 603
                           ++  R KI +NEAE+SRGVK+VA LERIR++LEEETG + SFSSW
Sbjct: 237  DMQQPKFYSGKRTHASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSW 296

Query: 602  AAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQ 423
            A AAGV++KEL  +L FGW CRDELL+STRSLV+YLA+NY G G+AF+DLIQAGN+GVLQ
Sbjct: 297  AEAAGVEQKELQHHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQ 356

Query: 422  GAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALDKGD 243
            GA RFD +RGYKFSTYVQYWI+KSL  L+++HAR IRIPFT+ KAI++I KARKAL +  
Sbjct: 357  GAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAINQIHKARKALSRSH 416

Query: 242  GRCPDDSEISKFTGFSLAKIESANNALRVVGSINQ 138
            G+ P D+EI+K+TG S A+I  A+  LRVVGSI+Q
Sbjct: 417  GKFPGDNEIAKYTGLSTARIAMASKCLRVVGSIDQ 451


>ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europaea var. sylvestris]
          Length = 558

 Score =  346 bits (887), Expect = e-109
 Identities = 203/457 (44%), Positives = 277/457 (60%), Gaps = 33/457 (7%)
 Frame = -1

Query: 1409 LGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINY--NLARVSIPMESENSYND 1236
            +GFRL+ KW       +                 K ++  Y   L   S+      +  D
Sbjct: 1    MGFRLDFKWRSLSVQSLLSTSSSSSLPSSYSCRGKGRESTYLTKLPITSVVYGETEALID 60

Query: 1235 PSGVNPCSSISRILDTDYSETSNVQRSVG-------YLLQDDI---------LTFLTSLQ 1104
            P G   C +  +IL+ +Y     ++   G       Y L DD          L FL SLQ
Sbjct: 61   PLGPRTCLTSPQILEDNYFGNKEIKMDPGKQSRNGLYSLSDDNIQMSAEEDKLPFLISLQ 120

Query: 1103 ANKISQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEISK----Y 936
            A + S + LL++NL  LE  F+DSDV++LER+IL QL+++GAL+   T  S   K     
Sbjct: 121  ATEASHFSLLMKNLDKLEKMFSDSDVITLERDILQQLKRLGALRLFHTCLSRALKSSTLL 180

Query: 935  PLSVSP---INEETVKKPI--------VHSTRKVERKSQRERMSKKVNGVCTVEFQPQAT 789
             LS  P   + E  + +P+        V S +K +R+ +R+R  +K N    +EF  +  
Sbjct: 181  DLSDGPMELVEETRINEPVTDHEGKVVVQSGKKEQRRLRRKRALEKGNDSSMLEFSSKTI 240

Query: 788  NYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFS 609
                             T++ ++KIT+NEAE+S GVK+VA+LE++RTMLEEETG + S +
Sbjct: 241  ----PGNKISSRRRHLITRKKKLKITKNEAEMSSGVKLVADLEKVRTMLEEETGQVGSLN 296

Query: 608  SWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGV 429
            SWA AA V++K L + L  GW CRDELLRSTRSLV+++AKNY G G+AF+DLIQAGN GV
Sbjct: 297  SWAEAARVEKKTLQQRLHHGWQCRDELLRSTRSLVVFIAKNYRGLGVAFEDLIQAGNFGV 356

Query: 428  LQGAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALDK 249
            LQGAERFD+SRGYKFSTYVQYWI+KS+ ML++RHAR +RIPF +SK I+++QKARK+L  
Sbjct: 357  LQGAERFDQSRGYKFSTYVQYWIRKSMSMLVARHARGVRIPFMLSKVINQVQKARKSLRS 416

Query: 248  GDGRCPDDSEISKFTGFSLAKIESANNALRVVGSINQ 138
              G+ PDD+EI+KFTG S+AKI SA+  LRVVGSI+Q
Sbjct: 417  SHGKHPDDTEIAKFTGLSIAKITSASKCLRVVGSIDQ 453


>ref|XP_017227798.1| PREDICTED: RNA polymerase sigma factor sigC [Daucus carota subsp.
            sativus]
 gb|KZN11801.1| hypothetical protein DCAR_004457 [Daucus carota subsp. sativus]
          Length = 553

 Score =  342 bits (876), Expect = e-108
 Identities = 199/452 (44%), Positives = 278/452 (61%), Gaps = 24/452 (5%)
 Frame = -1

Query: 1415 MGLGFRLNLKWGLTLQPRIXXXXXXXXXXXXXXXSFKVKDINYNLARVSIPM----ESEN 1248
            MG+GFRLN +W  +++                  SF+  + +Y+  RVS P     E E 
Sbjct: 1    MGIGFRLNFRWASSVR---YPYYCTTSSSWPSSYSFRAMEASYDTTRVSFPYFVLGEIET 57

Query: 1247 SYNDPSGVNPCSSISRILDTDYSETSNV--QRSVGYLLQDDILTFL------TSLQANKI 1092
             +ND   V+ C+S ++ L  +Y ET ++  ++S G  L   I +        TS +A+K+
Sbjct: 58   MHNDLPRVHSCASAAQTLSNNYLETEHISIRKSSGGDLSCIISSSFRKPGSATSAEASKL 117

Query: 1091 SQYRLLLENLVVLEDTFADSDVVSLERNILVQLEKIGALKFLRTSFSEISKYP--LSVSP 918
            S + +L+ NL +LE TFADSDV+ LE +IL QL+++GALK   T  S     P   SVS 
Sbjct: 118  SHFGVLMNNLSMLEKTFADSDVLRLENDILSQLDRLGALKLFHTCLSRTRSRPGNSSVSE 177

Query: 917  ----------INEETVKKPIVHSTRKVERKSQRERMSKKVNGVCTVEFQPQATNYKXXXX 768
                      +N + + K +V S +K +RK++R + S        +   P  +  K    
Sbjct: 178  DIEEHQMESHVNADQMAKIVVSSGKKEKRKAKRVKSSWNEKDFYLL---PSNSKPKHQHQ 234

Query: 767  XXXXXXXXXNTKRGRVKITRNEAELSRGVKMVANLERIRTMLEEETGSMVSFSSWAAAAG 588
                          R K+ RNEAEL+ GVK+VANLERI+  LE+ETG   S SSWA AA 
Sbjct: 235  NLSSPGKSSKYSGSRPKVARNEAELTVGVKLVANLERIKMQLEKETGETASLSSWAEAAN 294

Query: 587  VDRKELLENLQFGWCCRDELLRSTRSLVIYLAKNYNGQGIAFKDLIQAGNVGVLQGAERF 408
            +D+K L +NL FG  C+DELLRSTRSL++Y+A+NY G G+ F+DLIQAG++GVLQGAERF
Sbjct: 295  IDKKTLQQNLHFGCYCKDELLRSTRSLILYIARNYRGVGVGFEDLIQAGSIGVLQGAERF 354

Query: 407  DRSRGYKFSTYVQYWIKKSLLMLLSRHAREIRIPFTMSKAISKIQKARKALDKGDGRCPD 228
            D +RGY+FSTY+QYWI+KS+LML+ R+ R +RIP+ +SKA+ KIQKARK L    G  PD
Sbjct: 355  DHTRGYRFSTYIQYWIRKSILMLVERNCRGVRIPYALSKAVKKIQKARKTLSNSLGTYPD 414

Query: 227  DSEISKFTGFSLAKIESANNALRVVGSINQII 132
            D+EI++ TG SL+KI +A+N LRVVGS++Q I
Sbjct: 415  DNEIAESTGLSLSKIAAASNCLRVVGSLDQRI 446


>ref|XP_019070929.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
            lycopersicum]
          Length = 529

 Score =  338 bits (868), Expect = e-107
 Identities = 197/422 (46%), Positives = 268/422 (63%), Gaps = 32/422 (7%)
 Frame = -1

Query: 1307 KVKDINYNLARVSIPM---ESENSYNDPSGVNPCSSISRILDTDYSET------------ 1173
            K ++  Y+ AR   P    + E S++DP  V  C S  ++  +D S T            
Sbjct: 9    KGRETLYDPARSLKPFINGDCEPSHSDPFRVQTCLSDPQLWTSDASVTTETKTRNGRGSP 68

Query: 1172 SNVQRSVG-YLLQDDILTFLTSLQANKISQYRLLLENLVVLEDTFADSDVVSLERNILVQ 996
            SNV   +G Y +  +  T+L +    K   + LL++NL +LE+ FADS++  LER+ILVQ
Sbjct: 69   SNVYGDIGSYKIDGEKPTYLNT---TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQ 125

Query: 995  LEKIGALKFLRTSFSEI---SKYPLSVSPINEETVK-------------KPIVHSTRKVE 864
            LEK+GAL+F  T  S     S +P  V  +  E +K             K +V S +K E
Sbjct: 126  LEKLGALEFFHTCLSRTHHSSSFP-KVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQE 184

Query: 863  RKSQRERMSKKVNGVCTVEFQPQATNYKXXXXXXXXXXXXXNTKRGRVKITRNEAELSRG 684
            R S+R+R S+  N + TV+   +                   ++  R KI +NEAE+S+G
Sbjct: 185  RMSRRKRASRNANDIITVQPHTKNIQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKG 244

Query: 683  VKMVANLERIRTMLEEETGSMVSFSSWAAAAGVDRKELLENLQFGWCCRDELLRSTRSLV 504
            VK+VA LERIR++LEEETG + +FSSWA AAG+++KEL ++L FGW CRDELL+STRSLV
Sbjct: 245  VKLVAQLERIRSILEEETGQVATFSSWAKAAGIEQKELQQHLHFGWYCRDELLKSTRSLV 304

Query: 503  IYLAKNYNGQGIAFKDLIQAGNVGVLQGAERFDRSRGYKFSTYVQYWIKKSLLMLLSRHA 324
            +YLA+NY G G+AF+DLIQAGN+GVLQGA RFD +RGYKFSTYVQYWI+KSL  L+++HA
Sbjct: 305  LYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHA 364

Query: 323  REIRIPFTMSKAISKIQKARKALDKGDGRCPDDSEISKFTGFSLAKIESANNALRVVGSI 144
            R +RIPFT+ K I++I KARK L +  G+ P D EI+KFTG S A+I  A+  LRVVGSI
Sbjct: 365  RGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSI 424

Query: 143  NQ 138
            +Q
Sbjct: 425  DQ 426