BLASTX nr result

ID: Chrysanthemum21_contig00016332 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00016332
         (401 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023764362.1| zinc finger CCCH domain-containing protein 4...    89   4e-18
ref|XP_023764361.1| zinc finger CCCH domain-containing protein 4...    89   4e-18
gb|KVH89135.1| hypothetical protein Ccrd_008874 [Cynara carduncu...    87   3e-17
gb|PIN05932.1| U3 snoRNP-associated protein (contains WD40 repea...    55   4e-06
ref|XP_022885596.1| zinc finger CCCH domain-containing protein 4...    55   6e-06
ref|XP_022885598.1| zinc finger CCCH domain-containing protein 4...    55   6e-06
ref|XP_022885597.1| zinc finger CCCH domain-containing protein 4...    55   6e-06
ref|XP_022885595.1| zinc finger CCCH domain-containing protein 4...    55   6e-06
gb|PIN05935.1| WD40 repeat-containing protein [Handroanthus impe...    54   8e-06
ref|XP_022852459.1| zinc finger CCCH domain-containing protein 4...    53   9e-06

>ref|XP_023764362.1| zinc finger CCCH domain-containing protein 48-like isoform X2
           [Lactuca sativa]
 gb|PLY85081.1| hypothetical protein LSAT_7X8200 [Lactuca sativa]
          Length = 446

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 54/133 (40%), Positives = 66/133 (49%)
 Frame = +1

Query: 1   RCVRNPCRFLHPDLPKPDTIKSKHSWKNPTTFKSRNSPAVEKPQQKIMKNNENREQYQIA 180
           RC RNPC+F HPD        SK++WKNP T KS NSP +EKP+ K  KN EN    Q  
Sbjct: 47  RCTRNPCKFKHPDQA---ISISKYAWKNPNTLKSENSPPIEKPRTKFSKNKENSNLNQNV 103

Query: 181 SKTLKKVLTSNTNVNVNQXXXXXXXXXXXXVEKSEVNITGQSKVIGKTVNCPNGENLQPW 360
            K+ +K+LT+  N                          GQ+K I K     N ENL P 
Sbjct: 104 HKSQQKLLTNEVN-------------------------PGQTKSIPK----KNSENLHPG 134

Query: 361 FCGSGLSMLAQLE 399
           F G GLSM+ +LE
Sbjct: 135 FYGKGLSMVTRLE 147


>ref|XP_023764361.1| zinc finger CCCH domain-containing protein 48-like isoform X1
           [Lactuca sativa]
          Length = 451

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 54/133 (40%), Positives = 66/133 (49%)
 Frame = +1

Query: 1   RCVRNPCRFLHPDLPKPDTIKSKHSWKNPTTFKSRNSPAVEKPQQKIMKNNENREQYQIA 180
           RC RNPC+F HPD        SK++WKNP T KS NSP +EKP+ K  KN EN    Q  
Sbjct: 47  RCTRNPCKFKHPDQA---ISISKYAWKNPNTLKSENSPPIEKPRTKFSKNKENSNLNQNV 103

Query: 181 SKTLKKVLTSNTNVNVNQXXXXXXXXXXXXVEKSEVNITGQSKVIGKTVNCPNGENLQPW 360
            K+ +K+LT+  N                          GQ+K I K     N ENL P 
Sbjct: 104 HKSQQKLLTNEVN-------------------------PGQTKSIPK----KNSENLHPG 134

Query: 361 FCGSGLSMLAQLE 399
           F G GLSM+ +LE
Sbjct: 135 FYGKGLSMVTRLE 147


>gb|KVH89135.1| hypothetical protein Ccrd_008874 [Cynara cardunculus var. scolymus]
          Length = 448

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 55/139 (39%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
 Frame = +1

Query: 1   RCVRNPCRFLHPDLPKPDTIKSKHSWKNPTTFKSRNSPAVEKPQQKIMKNNENREQYQIA 180
           RC RNPC+FLH    K  + +SK++WKNP +FKS NSP +E  Q+ I+KN  +  Q Q  
Sbjct: 47  RCTRNPCKFLHSQPAKTSSKQSKYTWKNPVSFKSENSPPIENAQRTILKNKLDCCQNQ-- 104

Query: 181 SKTLKKVLTSNTNVNVNQXXXXXXXXXXXXVEKSEVNITGQSKVIGK---TVNCPNG--- 342
           SK+  K     T VNV Q              KS   I  +   +     T +C  G   
Sbjct: 105 SKSTLKTQQKLTEVNVGQ-------------SKSIPKIQQKKHKLCNYWVTESCKKGDKC 151

Query: 343 ENLQPWFCGSGLSMLAQLE 399
           ENL  WF G+GLSM+++LE
Sbjct: 152 ENLHSWFSGNGLSMVSRLE 170


>gb|PIN05932.1| U3 snoRNP-associated protein (contains WD40 repeats) [Handroanthus
           impetiginosus]
          Length = 470

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
 Frame = +1

Query: 1   RCVRNPCRFLHPDLPKPDTIKS--------------KHSWKNPTTFKSRNSPAVEKPQQK 138
           RC RNPCRF+H +LP P + +S              K +W+NP  + +  + A+   +  
Sbjct: 32  RCKRNPCRFMHRELPPPQSEQSHSTPTADIHQHKSRKMTWRNP-NYSTSKTVAISSNEGG 90

Query: 139 IMKNNENREQYQIASKTLKK--------VLTSNTNVNVNQXXXXXXXXXXXXVEKSEVNI 294
           I+    ++   + AS+  ++        V+ ++T  ++ Q             + S   +
Sbjct: 91  ILNRTSDQRASEKASENTERNSGDMDQEVVIASTGSDI-QAEQEVSTIRADSGKSSVQEV 149

Query: 295 TGQSKVIGKTVNCPNGE---NLQPWFCGSGLSMLAQL 396
             +      T NC  GE   +L  WFCGSG +MLA+L
Sbjct: 150 QPKQCKYWITGNCVYGEKCKDLHSWFCGSGFTMLAKL 186


>ref|XP_022885596.1| zinc finger CCCH domain-containing protein 48-like isoform X2 [Olea
           europaea var. sylvestris]
          Length = 476

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 37/170 (21%)
 Frame = +1

Query: 1   RCVRNPCRFLHPDLP---------KPDT--IKS-KHSWKNPTTFKSRNSPAVEKP----- 129
           RC R+PCRF+H + P          P+T  +KS + +W+NP     +N   +        
Sbjct: 32  RCNRDPCRFMHRESPPQTRQTHAASPETHYLKSTRRTWRNPNFHTPKNGTVLTNEGDCSN 91

Query: 130 -------QQKIMKNNENREQYQIASKTLKKVLTSNTNVNVNQXXXXXXXXXXXXVEKSEV 288
                  QQ ++  N  +    I  K  + V+TSN +++  Q            ++K+  
Sbjct: 92  CTSGKVSQQGVLAKNGRK----IDRKDQEMVITSNGSIHCRQT-----------MQKTAE 136

Query: 289 NITGQSKVIGKTV----------NCPNGE---NLQPWFCGSGLSMLAQLE 399
            +   SK + KT+          NC +G+   ++  WFCGSG +M+ +LE
Sbjct: 137 AVESDSKSVQKTLPKLCKYWVTDNCVHGDKCKDVHSWFCGSGFTMMTKLE 186


>ref|XP_022885598.1| zinc finger CCCH domain-containing protein 48-like isoform X2 [Olea
           europaea var. sylvestris]
          Length = 476

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 37/170 (21%)
 Frame = +1

Query: 1   RCVRNPCRFLHPDLP---------KPDT--IKS-KHSWKNPTTFKSRNSPAVEKP----- 129
           RC R+PCRF+H + P          P+T  +KS + +W+NP     +N   +        
Sbjct: 32  RCNRDPCRFMHRESPPQTRQTHAASPETHYLKSTRRTWRNPNFHTPKNGTVLTNEGDCSN 91

Query: 130 -------QQKIMKNNENREQYQIASKTLKKVLTSNTNVNVNQXXXXXXXXXXXXVEKSEV 288
                  QQ ++  N  +    I  K  + V+TSN +++  Q            ++K+  
Sbjct: 92  CTSGKVSQQGVLAKNGRK----IDRKDQEMVITSNGSIHCRQT-----------MQKTAE 136

Query: 289 NITGQSKVIGKTV----------NCPNGE---NLQPWFCGSGLSMLAQLE 399
            +   SK + KT+          NC +G+   ++  WFCGSG +M+ +LE
Sbjct: 137 AVESDSKSVQKTLPKLCKYWVTDNCVHGDKCKDVHSWFCGSGFTMMTKLE 186


>ref|XP_022885597.1| zinc finger CCCH domain-containing protein 48-like isoform X1 [Olea
           europaea var. sylvestris]
          Length = 500

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 37/170 (21%)
 Frame = +1

Query: 1   RCVRNPCRFLHPDLP---------KPDT--IKS-KHSWKNPTTFKSRNSPAVEKP----- 129
           RC R+PCRF+H + P          P+T  +KS + +W+NP     +N   +        
Sbjct: 32  RCNRDPCRFMHRESPPQTRQTHAASPETHYLKSTRRTWRNPNFHTPKNGTVLTNEGDCSN 91

Query: 130 -------QQKIMKNNENREQYQIASKTLKKVLTSNTNVNVNQXXXXXXXXXXXXVEKSEV 288
                  QQ ++  N  +    I  K  + V+TSN +++  Q            ++K+  
Sbjct: 92  CTSGKVSQQGVLAKNGRK----IDRKDQEMVITSNGSIHCRQT-----------MQKTAE 136

Query: 289 NITGQSKVIGKTV----------NCPNGE---NLQPWFCGSGLSMLAQLE 399
            +   SK + KT+          NC +G+   ++  WFCGSG +M+ +LE
Sbjct: 137 AVESDSKSVQKTLPKLCKYWVTDNCVHGDKCKDVHSWFCGSGFTMMTKLE 186


>ref|XP_022885595.1| zinc finger CCCH domain-containing protein 48-like isoform X1 [Olea
           europaea var. sylvestris]
          Length = 500

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 37/170 (21%)
 Frame = +1

Query: 1   RCVRNPCRFLHPDLP---------KPDT--IKS-KHSWKNPTTFKSRNSPAVEKP----- 129
           RC R+PCRF+H + P          P+T  +KS + +W+NP     +N   +        
Sbjct: 32  RCNRDPCRFMHRESPPQTRQTHAASPETHYLKSTRRTWRNPNFHTPKNGTVLTNEGDCSN 91

Query: 130 -------QQKIMKNNENREQYQIASKTLKKVLTSNTNVNVNQXXXXXXXXXXXXVEKSEV 288
                  QQ ++  N  +    I  K  + V+TSN +++  Q            ++K+  
Sbjct: 92  CTSGKVSQQGVLAKNGRK----IDRKDQEMVITSNGSIHCRQT-----------MQKTAE 136

Query: 289 NITGQSKVIGKTV----------NCPNGE---NLQPWFCGSGLSMLAQLE 399
            +   SK + KT+          NC +G+   ++  WFCGSG +M+ +LE
Sbjct: 137 AVESDSKSVQKTLPKLCKYWVTDNCVHGDKCKDVHSWFCGSGFTMMTKLE 186


>gb|PIN05935.1| WD40 repeat-containing protein [Handroanthus impetiginosus]
          Length = 407

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 30/162 (18%)
 Frame = +1

Query: 1   RCVRNPCRFLHPDLPKPDTIK--------------SKHSWKNPTTFKSRNSPAVEKPQQK 138
           RC RNPCRF+H + P P + +               K +WKNP  + +  + AV   +  
Sbjct: 32  RCNRNPCRFMHRESPPPQSEQPHSAPHADDHRHKSRKMTWKNP-KYDTPKTVAVSSGEGG 90

Query: 139 IMKNNENREQYQIASKTLKKVLTSNTNVNVNQXXXXXXXXXXXXVEKSEVNI----TGQS 306
           I+    +    ++AS+  KK      + +V+Q             E+  V+     +G+S
Sbjct: 91  ILNRTSDLRASEMASENTKK-----NSGDVDQEVVIASAGSGGQAEQEVVSTIRDDSGKS 145

Query: 307 KV---------IGKTVNCPNGE---NLQPWFCGSGLSMLAQL 396
            V            T NC  GE   +L  WFCGSG +MLA+L
Sbjct: 146 SVQEVPPKQCKYWITGNCVYGEKCKDLHSWFCGSGFTMLAKL 187


>ref|XP_022852459.1| zinc finger CCCH domain-containing protein 48-like [Olea europaea
           var. sylvestris]
          Length = 198

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 31/164 (18%)
 Frame = +1

Query: 1   RCVRNPCRFLH---PDLPKPDTI------------KSKHSWKNPTTFKSRNSPAV----- 120
           RC RNPCRF+H   P +P+   I             S+ +W+N  +   +N   +     
Sbjct: 32  RCNRNPCRFMHRESPPIPQTKQIHSASPEESHYLKSSRRTWRNTNSSTPKNVTLLTNRGA 91

Query: 121 -------EKPQQKIMKNNENREQYQIASKTLKKVLTSNTNVNVNQXXXXXXXXXXXXVEK 279
                  E  QQ+++  NE +    I     + V+TS  +++  Q             ++
Sbjct: 92  GSKRTSGEVSQQEVLAKNERK----IDRMDQEMVVTSKESIHCQQTVQKALTTESVESDR 147

Query: 280 SEV-NITGQSKVIGKTVNCPNGEN---LQPWFCGSGLSMLAQLE 399
             V  I         T NC +G+N   +  W+CGSG +ML +LE
Sbjct: 148 KPVQKIQPNVCKYWVTANCVHGDNCKDIHSWYCGSGFTMLTKLE 191


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