BLASTX nr result
ID: Chrysanthemum21_contig00016213
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00016213
(389 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KVH92985.1| RNA polymerase, Rpb5, N-terminal [Cynara carduncu... 107 7e-26
ref|XP_021992524.1| DNA-directed RNA polymerases II and IV subun... 104 3e-25
ref|XP_023761890.1| DNA-directed RNA polymerases II and IV subun... 88 7e-19
emb|CDP10286.1| unnamed protein product [Coffea canephora] 77 9e-15
ref|XP_021905796.1| DNA-directed RNA polymerases II and IV subun... 74 2e-14
dbj|GAU26089.1| hypothetical protein TSUD_225520, partial [Trifo... 73 1e-13
ref|XP_014507782.1| DNA-directed RNA polymerases II and IV subun... 74 1e-13
ref|XP_014510735.1| DNA-directed RNA polymerases II and IV subun... 72 3e-13
gb|OWM86902.1| hypothetical protein CDL15_Pgr015938 [Punica gran... 73 3e-13
ref|XP_008451219.1| PREDICTED: DNA-directed RNA polymerases II a... 73 4e-13
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases II a... 73 4e-13
ref|XP_010048536.1| PREDICTED: DNA-directed RNA polymerases II a... 72 5e-13
gb|AFK38034.1| unknown [Lotus japonicus] 72 1e-12
ref|XP_017186779.1| PREDICTED: DNA-directed RNA polymerases II a... 70 1e-12
ref|XP_022755018.1| DNA-directed RNA polymerases II and IV subun... 71 1e-12
ref|XP_022142704.1| DNA-directed RNA polymerases II and IV subun... 71 1e-12
gb|OMO58197.1| hypothetical protein COLO4_34810 [Corchorus olito... 71 1e-12
ref|XP_018829461.1| PREDICTED: DNA-directed RNA polymerases II a... 71 1e-12
ref|XP_018815016.1| PREDICTED: DNA-directed RNA polymerases II a... 71 1e-12
ref|XP_017438860.1| PREDICTED: DNA-directed RNA polymerases II a... 71 1e-12
>gb|KVH92985.1| RNA polymerase, Rpb5, N-terminal [Cynara cardunculus var. scolymus]
Length = 273
Score = 107 bits (267), Expect = 7e-26
Identities = 50/61 (81%), Positives = 56/61 (91%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
MSLPD EIT+LHR+RKTCFEML+DRGYEVEDSEIDM+RKEFIDK+NG I RE+LT KSK
Sbjct: 70 MSLPDEEITKLHRVRKTCFEMLRDRGYEVEDSEIDMTRKEFIDKHNGTIRREDLTFLKSK 129
Query: 189 P 187
P
Sbjct: 130 P 130
>ref|XP_021992524.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Helianthus
annuus]
gb|OTG06853.1| putative DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Helianthus annuus]
Length = 224
Score = 104 bits (260), Expect = 3e-25
Identities = 50/62 (80%), Positives = 55/62 (88%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
MS+ D EITRLHR+RKTCFEML+DRGYEVEDSEI MSRKEFIDK+NG I RE+LT KSK
Sbjct: 1 MSVSDEEITRLHRVRKTCFEMLRDRGYEVEDSEIQMSRKEFIDKHNGVIRREDLTFLKSK 60
Query: 189 PG 184
PG
Sbjct: 61 PG 62
>ref|XP_023761890.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Lactuca
sativa]
ref|XP_023761891.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Lactuca
sativa]
gb|PLY87069.1| hypothetical protein LSAT_5X133961 [Lactuca sativa]
Length = 225
Score = 88.2 bits (217), Expect = 7e-19
Identities = 43/62 (69%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = -3
Query: 369 MSLPDSE-ITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKS 193
MS P+ E IT + R+ KTC+EMLKDRGYEVEDSEI+M+RKEFIDK+NG I RE L KS
Sbjct: 1 MSTPEGEEITTVFRVMKTCYEMLKDRGYEVEDSEINMTRKEFIDKHNGTIRREELAFTKS 60
Query: 192 KP 187
KP
Sbjct: 61 KP 62
>emb|CDP10286.1| unnamed protein product [Coffea canephora]
Length = 206
Score = 77.0 bits (188), Expect = 9e-15
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M+L D E+TRLHRIRKT EML+DR Y V D EI M ++EFI KY ++ RE+L +NKSK
Sbjct: 1 MTLSDEEVTRLHRIRKTVMEMLQDRAYFVTDKEIQMEKREFIQKYGENMKREDLVINKSK 60
>ref|XP_021905796.1| DNA-directed RNA polymerases II and IV subunit 5A [Carica papaya]
Length = 129
Score = 74.3 bits (181), Expect = 2e-14
Identities = 32/60 (53%), Positives = 48/60 (80%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M+L D E+ RLHRIR+T +MLKDRGY V D+E++MS+++F+ KY ++ RE+L +NK+K
Sbjct: 1 MTLSDEEVRRLHRIRRTVMQMLKDRGYFVTDTELNMSKQQFLSKYGENMKREDLVINKAK 60
>dbj|GAU26089.1| hypothetical protein TSUD_225520, partial [Trifolium subterraneum]
Length = 165
Score = 73.2 bits (178), Expect = 1e-13
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M L + EITRL+RIRKT EML+DRGY V D E+DMS+ EF +KY ++ RE+L +NK+K
Sbjct: 1 MVLSEDEITRLYRIRKTVMEMLRDRGYLVGDFEVDMSKLEFREKYGDNMKREDLVINKAK 60
>ref|XP_014507782.1| DNA-directed RNA polymerases II and IV subunit 5A [Vigna radiata
var. radiata]
Length = 206
Score = 73.9 bits (180), Expect = 1e-13
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M LPD EI+RL+RIRKT +ML+DRGY V D EI+MS+ EF KY + RE+L +NKSK
Sbjct: 1 MVLPDEEISRLYRIRKTVMQMLRDRGYLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 189 PGQLG 175
G
Sbjct: 61 KDNSG 65
>ref|XP_014510735.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Vigna
radiata var. radiata]
Length = 168
Score = 72.4 bits (176), Expect = 3e-13
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNK 196
M LPD EI+RL+RIRKT +ML+DRGY VED EI+MS+ EF KY + RE+L +NK
Sbjct: 1 MVLPDEEISRLYRIRKTVMQMLRDRGYLVEDFEINMSKHEFKSKYGKHMKREDLVINK 58
>gb|OWM86902.1| hypothetical protein CDL15_Pgr015938 [Punica granatum]
gb|PKI37600.1| hypothetical protein CRG98_042024 [Punica granatum]
Length = 206
Score = 73.2 bits (178), Expect = 3e-13
Identities = 33/60 (55%), Positives = 47/60 (78%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
MSLP+ EITRL R R+T +ML+DRGY VE SE++M+R++FIDK+ ++ RE+L + K K
Sbjct: 1 MSLPEEEITRLFRARRTVLQMLQDRGYAVEKSELEMTRRDFIDKFGSNLKREDLLVLKDK 60
>ref|XP_008451219.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Cucumis melo]
Length = 207
Score = 72.8 bits (177), Expect = 4e-13
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M L + EITRL RIRKT F+ML+DRGY V D EIDM+R++F KY ++ RE++ +NKSK
Sbjct: 1 MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60
>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Cucumis sativus]
ref|XP_011659238.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Cucumis sativus]
gb|KGN44717.1| hypothetical protein Csa_7G374590 [Cucumis sativus]
Length = 207
Score = 72.8 bits (177), Expect = 4e-13
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M L + EITRL RIRKT F+ML+DRGY V D EIDM+R++F KY ++ RE++ +NKSK
Sbjct: 1 MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60
>ref|XP_010048536.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Eucalyptus grandis]
ref|XP_010048537.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Eucalyptus grandis]
gb|KCW80809.1| hypothetical protein EUGRSUZ_C02179 [Eucalyptus grandis]
Length = 206
Score = 72.4 bits (176), Expect = 5e-13
Identities = 32/60 (53%), Positives = 47/60 (78%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
MSLPD EITRL R+R+T +MLKDRGY VE SE++++RK+F+ K+ ++ RE+L + K +
Sbjct: 1 MSLPDEEITRLFRVRRTVLQMLKDRGYAVEKSELEITRKDFVQKFGENMKREDLLILKHR 60
>gb|AFK38034.1| unknown [Lotus japonicus]
Length = 206
Score = 71.6 bits (174), Expect = 1e-12
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M+L + +IT+LHRIRKT +ML+DR Y V D EI+MSR EF KY ++ RE+LT+NK+K
Sbjct: 1 MALTEEDITKLHRIRKTVMQMLRDRNYLVGDFEINMSRHEFKTKYGDNMKREDLTINKTK 60
>ref|XP_017186779.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Malus domestica]
Length = 135
Score = 69.7 bits (169), Expect = 1e-12
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M L + EITRL+R+RKT +MLKDR Y V D EI+MS+++F DKY ++ RE+L +NK+K
Sbjct: 1 MVLTEEEITRLYRVRKTVMQMLKDRNYLVGDFEINMSKEQFKDKYGENMKREDLIINKTK 60
>ref|XP_022755018.1| DNA-directed RNA polymerases II and IV subunit 5A [Durio
zibethinus]
Length = 206
Score = 71.2 bits (173), Expect = 1e-12
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M L D EI RL RIRKT +MLKDRGY V D EI+MS+++FI KY ++ RE+L +NK+K
Sbjct: 1 MVLSDDEIKRLFRIRKTVLQMLKDRGYFVGDFEINMSKEQFISKYGENMKREDLVINKTK 60
>ref|XP_022142704.1| DNA-directed RNA polymerases II and IV subunit 5A [Momordica
charantia]
ref|XP_022142705.1| DNA-directed RNA polymerases II and IV subunit 5A [Momordica
charantia]
Length = 206
Score = 71.2 bits (173), Expect = 1e-12
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M L D EITRL RIRKT +MLKDRGY V D EI MSR++F +KY + RE+L +NK+K
Sbjct: 1 MVLADEEITRLFRIRKTVLQMLKDRGYFVGDFEIGMSREQFRNKYGESMKREDLVINKAK 60
>gb|OMO58197.1| hypothetical protein COLO4_34810 [Corchorus olitorius]
gb|OMO87994.1| hypothetical protein CCACVL1_08608 [Corchorus capsularis]
Length = 206
Score = 71.2 bits (173), Expect = 1e-12
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M L D EI RL+RIRKT +MLKDRGY V D EI+M++ +FI KY ++ RE+L +NKSK
Sbjct: 1 MVLSDDEIKRLYRIRKTVMQMLKDRGYFVGDFEINMTKGQFISKYGENMKREDLVINKSK 60
>ref|XP_018829461.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018829463.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018829464.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
Length = 206
Score = 71.2 bits (173), Expect = 1e-12
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M+L + EITRL RIR+T +MLKDRGY V D EIDM++++F +KY + RE+L +NKSK
Sbjct: 1 MTLSEEEITRLFRIRRTVMQMLKDRGYFVGDFEIDMTKEQFKNKYGESMKREDLVINKSK 60
>ref|XP_018815016.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018815026.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018815034.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
Length = 206
Score = 71.2 bits (173), Expect = 1e-12
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M L + EITRL RIR+T +MLKDRGY V D EIDM++++F DKY + RE+L +NK+K
Sbjct: 1 MMLSEEEITRLFRIRRTVMQMLKDRGYFVGDFEIDMTKEQFKDKYGESMKREDLVINKAK 60
>ref|XP_017438860.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
isoform X1 [Vigna angularis]
ref|XP_017438861.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
isoform X2 [Vigna angularis]
dbj|BAU02887.1| hypothetical protein VIGAN_11248300 [Vigna angularis var.
angularis]
Length = 206
Score = 71.2 bits (173), Expect = 1e-12
Identities = 36/65 (55%), Positives = 45/65 (69%)
Frame = -3
Query: 369 MSLPDSEITRLHRIRKTCFEMLKDRGYEVEDSEIDMSRKEFIDKYNGDITRENLTLNKSK 190
M LPD EI+RL RIRKT +ML+DRG+ V D EI+MS+ EF KY + RE+L +NKSK
Sbjct: 1 MVLPDEEISRLFRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 189 PGQLG 175
G
Sbjct: 61 KDNSG 65